BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= brP-0634 (750 letters) Database: nematostella 59,808 sequences; 16,821,457 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value SB_56628| Best HMM Match : Actin (HMM E-Value=0) 330 7e-91 SB_7187| Best HMM Match : No HMM Matches (HMM E-Value=.) 326 1e-89 SB_23733| Best HMM Match : No HMM Matches (HMM E-Value=.) 325 3e-89 SB_7190| Best HMM Match : No HMM Matches (HMM E-Value=.) 323 1e-88 SB_56| Best HMM Match : Actin (HMM E-Value=0) 323 1e-88 SB_23734| Best HMM Match : No HMM Matches (HMM E-Value=.) 180 1e-45 SB_19204| Best HMM Match : No HMM Matches (HMM E-Value=.) 160 1e-39 SB_54| Best HMM Match : Actin (HMM E-Value=0) 111 6e-25 SB_27656| Best HMM Match : Actin (HMM E-Value=4.79999e-40) 97 1e-20 SB_6996| Best HMM Match : Actin (HMM E-Value=1.7e-07) 84 1e-16 SB_3885| Best HMM Match : Actin (HMM E-Value=0.77) 69 4e-12 SB_34957| Best HMM Match : PARP (HMM E-Value=4.4e-12) 60 2e-09 SB_49385| Best HMM Match : Actin (HMM E-Value=0.00022) 58 8e-09 SB_43920| Best HMM Match : SRP-alpha_N (HMM E-Value=4.6) 56 2e-08 SB_3433| Best HMM Match : Actin (HMM E-Value=0.00011) 48 8e-06 SB_13343| Best HMM Match : No HMM Matches (HMM E-Value=.) 42 7e-04 SB_28400| Best HMM Match : PMSR (HMM E-Value=1.7e-24) 40 0.002 SB_49291| Best HMM Match : Herpes_UL69 (HMM E-Value=4.5) 34 0.14 SB_38756| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.76 SB_37540| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.76 SB_13911| Best HMM Match : PAN (HMM E-Value=0.033) 31 0.76 SB_18097| Best HMM Match : NadA (HMM E-Value=2.2) 31 0.76 SB_5400| Best HMM Match : DUF1153 (HMM E-Value=7.8) 31 0.76 SB_21074| Best HMM Match : NadA (HMM E-Value=2) 31 1.00 SB_38372| Best HMM Match : RVT_1 (HMM E-Value=0) 31 1.00 SB_2458| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.00 SB_47621| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.3 SB_15522| Best HMM Match : DUF590 (HMM E-Value=5.8) 31 1.3 SB_4310| Best HMM Match : RVT_1 (HMM E-Value=5e-28) 31 1.3 SB_56449| Best HMM Match : RVT_1 (HMM E-Value=0.28) 30 1.7 SB_35780| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.7 SB_10843| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.7 SB_9594| Best HMM Match : Extensin_2 (HMM E-Value=0.066) 30 1.7 SB_2746| Best HMM Match : RVT_1 (HMM E-Value=1.10002e-42) 30 1.7 SB_2102| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.7 SB_55880| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.7 SB_45157| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.7 SB_27518| Best HMM Match : RWD (HMM E-Value=0.015) 30 1.7 SB_11764| Best HMM Match : DSHCT (HMM E-Value=1.9e-27) 30 1.7 SB_5114| Best HMM Match : RVT_1 (HMM E-Value=1.10002e-42) 30 1.7 SB_38460| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.3 SB_37909| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.0 SB_24270| Best HMM Match : DUF1604 (HMM E-Value=5.2) 29 4.0 SB_10927| Best HMM Match : RVT_1 (HMM E-Value=6.6e-39) 29 4.0 SB_28336| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.3 SB_28979| Best HMM Match : RVT_1 (HMM E-Value=1.6e-40) 28 7.0 SB_20462| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.0 SB_11603| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.0 SB_12670| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.0 SB_12126| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.3 SB_10665| Best HMM Match : PT (HMM E-Value=6.2) 28 9.3 >SB_56628| Best HMM Match : Actin (HMM E-Value=0) Length = 376 Score = 330 bits (811), Expect = 7e-91 Identities = 152/158 (96%), Positives = 156/158 (98%) Frame = +1 Query: 97 MCDEXXAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 276 MCD+ AALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ Sbjct: 1 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60 Query: 277 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 456 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 120 Query: 457 TQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGE 570 TQIMFETFN+PAMYVAIQAVLSLYASGRTTGIV+DSG+ Sbjct: 121 TQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVMDSGD 158 Score = 71.3 bits (167), Expect = 8e-13 Identities = 34/50 (68%), Positives = 36/50 (72%) Frame = +2 Query: 569 NGVSHTVPIYEGYALPHAIXXXXXXXXXXXXXXMKILTERGYSFTTTAER 718 +GV+HTVPIYEGYALPHAI MKILTERGYSFTTTAER Sbjct: 158 DGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAER 207 >SB_7187| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 349 Score = 326 bits (801), Expect = 1e-89 Identities = 150/158 (94%), Positives = 155/158 (98%) Frame = +1 Query: 97 MCDEXXAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 276 M D+ AALV+DNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ Sbjct: 1 MADDDIAALVIDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60 Query: 277 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 456 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 120 Query: 457 TQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGE 570 TQIMFETFN+PAMYVAIQAVLSLYASGRTTGIV+DSG+ Sbjct: 121 TQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVMDSGD 158 Score = 29.9 bits (64), Expect(2) = 0.012 Identities = 13/15 (86%), Positives = 13/15 (86%) Frame = +2 Query: 674 ILTERGYSFTTTAER 718 I ERGYSFTTTAER Sbjct: 166 IYEERGYSFTTTAER 180 Score = 26.6 bits (56), Expect(2) = 0.012 Identities = 12/16 (75%), Positives = 14/16 (87%), Gaps = 2/16 (12%) Frame = +2 Query: 569 NGVSHTVPIYE--GYA 610 +GVSHTVPIYE GY+ Sbjct: 158 DGVSHTVPIYEERGYS 173 >SB_23733| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 376 Score = 325 bits (798), Expect = 3e-89 Identities = 151/158 (95%), Positives = 155/158 (98%) Frame = +1 Query: 97 MCDEXXAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 276 M D+ AALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ Sbjct: 1 MEDDEIAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60 Query: 277 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 456 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 120 Query: 457 TQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGE 570 TQIMFETFN+PAMYVAIQAVLSLYASGRTTGIV+DSG+ Sbjct: 121 TQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVMDSGD 158 Score = 71.3 bits (167), Expect = 8e-13 Identities = 34/50 (68%), Positives = 36/50 (72%) Frame = +2 Query: 569 NGVSHTVPIYEGYALPHAIXXXXXXXXXXXXXXMKILTERGYSFTTTAER 718 +GV+HTVPIYEGYALPHAI MKILTERGYSFTTTAER Sbjct: 158 DGVTHTVPIYEGYALPHAIIRLDLAGRDLTDYLMKILTERGYSFTTTAER 207 >SB_7190| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 375 Score = 323 bits (793), Expect = 1e-88 Identities = 149/156 (95%), Positives = 154/156 (98%) Frame = +1 Query: 103 DEXXAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 282 ++ AALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK Sbjct: 2 EDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 61 Query: 283 RGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQ 462 RGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQ Sbjct: 62 RGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQ 121 Query: 463 IMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGE 570 IMFETFN+PAMYVAIQAVLSLYASGRTTGIV+DSG+ Sbjct: 122 IMFETFNSPAMYVAIQAVLSLYASGRTTGIVMDSGD 157 Score = 71.3 bits (167), Expect = 8e-13 Identities = 34/50 (68%), Positives = 36/50 (72%) Frame = +2 Query: 569 NGVSHTVPIYEGYALPHAIXXXXXXXXXXXXXXMKILTERGYSFTTTAER 718 +GV+HTVPIYEGYALPHAI MKILTERGYSFTTTAER Sbjct: 157 DGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAER 206 >SB_56| Best HMM Match : Actin (HMM E-Value=0) Length = 375 Score = 323 bits (793), Expect = 1e-88 Identities = 149/156 (95%), Positives = 154/156 (98%) Frame = +1 Query: 103 DEXXAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 282 ++ AALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK Sbjct: 2 EDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 61 Query: 283 RGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQ 462 RGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQ Sbjct: 62 RGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQ 121 Query: 463 IMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGE 570 IMFETFN+PAMYVAIQAVLSLYASGRTTGIV+DSG+ Sbjct: 122 IMFETFNSPAMYVAIQAVLSLYASGRTTGIVMDSGD 157 Score = 71.3 bits (167), Expect = 8e-13 Identities = 34/50 (68%), Positives = 36/50 (72%) Frame = +2 Query: 569 NGVSHTVPIYEGYALPHAIXXXXXXXXXXXXXXMKILTERGYSFTTTAER 718 +GV+HTVPIYEGYALPHAI MKILTERGYSFTTTAER Sbjct: 157 DGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAER 206 >SB_23734| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 338 Score = 180 bits (437), Expect = 1e-45 Identities = 82/89 (92%), Positives = 84/89 (94%) Frame = +1 Query: 103 DEXXAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 282 D+ AALV+DNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK Sbjct: 2 DDDVAALVIDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 61 Query: 283 RGILTLKYPIEHGIVTNWDDMEKIWHHTF 369 RGILTLKYPIEHGIVTNWDDMEKI TF Sbjct: 62 RGILTLKYPIEHGIVTNWDDMEKIMFETF 90 Score = 75.4 bits (177), Expect = 5e-14 Identities = 35/43 (81%), Positives = 40/43 (93%) Frame = +1 Query: 442 NREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGE 570 N + M +IMFETFN+PAMYVAIQAVLSLYASGRTTGIV+DSG+ Sbjct: 78 NWDDMEKIMFETFNSPAMYVAIQAVLSLYASGRTTGIVMDSGD 120 Score = 71.3 bits (167), Expect = 8e-13 Identities = 34/50 (68%), Positives = 36/50 (72%) Frame = +2 Query: 569 NGVSHTVPIYEGYALPHAIXXXXXXXXXXXXXXMKILTERGYSFTTTAER 718 +GV+HTVPIYEGYALPHAI MKILTERGYSFTTTAER Sbjct: 120 DGVTHTVPIYEGYALPHAIIRLDLAGRDLTDYLMKILTERGYSFTTTAER 169 >SB_19204| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 411 Score = 160 bits (388), Expect = 1e-39 Identities = 75/155 (48%), Positives = 105/155 (67%), Gaps = 3/155 (1%) Frame = +1 Query: 115 AALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRP--RHQGVMVGMGQKDSYVGDEAQSKRG 288 + +V DNG+G K G+AG + P +FPS+VGRP R + + KD VGDEA R Sbjct: 7 SVIVCDNGTGFVKCGYAGSNFPAHIFPSMVGRPIIRSSQKVGDIEVKDLMVGDEASQLRY 66 Query: 289 ILTLKYPIEHGIVTNWDDMEKIWHHTF-YNELRVAPEEHPVLLTEAPLNPKANREKMTQI 465 +L + YP+++GIV NWDDM+ +W +TF +++ + P VLLTE PLNP NREKM ++ Sbjct: 67 MLEVNYPMDNGIVRNWDDMKHVWDYTFGESKMNIDPRNTKVLLTEPPLNPMKNREKMIEV 126 Query: 466 MFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGE 570 MFE + +Y+AIQAVL+LYA G TG+V+DSG+ Sbjct: 127 MFENYQFEGVYIAIQAVLTLYAQGLLTGVVIDSGD 161 Score = 42.7 bits (96), Expect = 3e-04 Identities = 18/49 (36%), Positives = 27/49 (55%) Frame = +2 Query: 569 NGVSHTVPIYEGYALPHAIXXXXXXXXXXXXXXMKILTERGYSFTTTAE 715 +GV+H P+YEG+ALPH +K++ RGY+F TA+ Sbjct: 161 DGVTHICPVYEGFALPHLTRRLDIAGRDITKYLIKLMLLRGYAFNHTAD 209 >SB_54| Best HMM Match : Actin (HMM E-Value=0) Length = 2486 Score = 111 bits (267), Expect = 6e-25 Identities = 50/74 (67%), Positives = 61/74 (82%) Frame = +1 Query: 349 KIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLY 528 K+W H F ++LRV E+ PVLLTEAPLNPK NRE+M Q+MFE+FN P MYVA+QAV++LY Sbjct: 2130 KMWEHAF-DQLRVRGEDFPVLLTEAPLNPKMNRERMVQLMFESFNVPCMYVAVQAVMALY 2188 Query: 529 ASGRTTGIVLDSGE 570 ASGRTTG V D G+ Sbjct: 2189 ASGRTTGTVFDCGD 2202 Score = 59.7 bits (138), Expect = 2e-09 Identities = 23/34 (67%), Positives = 30/34 (88%) Frame = +1 Query: 121 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQ 222 +V+DNGSG CKAG + D++PR VFP+IVGRPRH+ Sbjct: 2097 VVIDNGSGFCKAGLSTDESPRVVFPAIVGRPRHK 2130 Score = 55.2 bits (127), Expect = 5e-08 Identities = 24/50 (48%), Positives = 32/50 (64%) Frame = +2 Query: 569 NGVSHTVPIYEGYALPHAIXXXXXXXXXXXXXXMKILTERGYSFTTTAER 718 +GVSHTVP+Y+GY LPHA +++TERGYSF +TAE+ Sbjct: 2202 DGVSHTVPVYDGYWLPHATQRIDLAGRDLTHYLQRLVTERGYSFQSTAEQ 2251 >SB_27656| Best HMM Match : Actin (HMM E-Value=4.79999e-40) Length = 367 Score = 97.5 bits (232), Expect = 1e-20 Identities = 40/58 (68%), Positives = 53/58 (91%) Frame = +1 Query: 397 EHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGE 570 +HPVLLTEAPLNP+ NREK ++ FETFN PA+++++QAVLSLYA+GRTTG+VLD+G+ Sbjct: 126 QHPVLLTEAPLNPRRNREKAAEVFFETFNVPALFISMQAVLSLYATGRTTGVVLDAGD 183 Score = 41.9 bits (94), Expect = 5e-04 Identities = 18/49 (36%), Positives = 29/49 (59%) Frame = +2 Query: 569 NGVSHTVPIYEGYALPHAIXXXXXXXXXXXXXXMKILTERGYSFTTTAE 715 +GVSH+VPIYEG+A+PH+I +L + G+ F +++E Sbjct: 183 DGVSHSVPIYEGFAMPHSIMRTDIAGRDVSRYLRLLLRKEGHCFHSSSE 231 >SB_6996| Best HMM Match : Actin (HMM E-Value=1.7e-07) Length = 240 Score = 83.8 bits (198), Expect = 1e-16 Identities = 34/87 (39%), Positives = 59/87 (67%) Frame = +1 Query: 307 PIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNT 486 PI+ G++ +WD EKI + + ++ HP+L++EA N + REK+T++MFE +N Sbjct: 3 PIKDGMIEDWDLFEKILDYIYSKNIKSDSALHPLLMSEAAWNTRIKREKLTELMFEKYNV 62 Query: 487 PAMYVAIQAVLSLYASGRTTGIVLDSG 567 PA ++ +VL+ +A+GR+ G+V+DSG Sbjct: 63 PAFFLCKNSVLTAFANGRSNGLVIDSG 89 >SB_3885| Best HMM Match : Actin (HMM E-Value=0.77) Length = 152 Score = 68.9 bits (161), Expect = 4e-12 Identities = 32/50 (64%), Positives = 35/50 (70%) Frame = +2 Query: 569 NGVSHTVPIYEGYALPHAIXXXXXXXXXXXXXXMKILTERGYSFTTTAER 718 +GVSH VPIYEGYALPHAI MK++TERGYSFTTTAER Sbjct: 36 DGVSHNVPIYEGYALPHAILRLDLAGRDLTDYLMKLMTERGYSFTTTAER 85 Score = 66.9 bits (156), Expect = 2e-11 Identities = 30/36 (83%), Positives = 34/36 (94%) Frame = +1 Query: 463 IMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGE 570 IMFE FN+PA+YVAIQAVLSLYASGRTTG+V DSG+ Sbjct: 1 IMFEAFNSPAVYVAIQAVLSLYASGRTTGVVFDSGD 36 >SB_34957| Best HMM Match : PARP (HMM E-Value=4.4e-12) Length = 1392 Score = 60.1 bits (139), Expect = 2e-09 Identities = 27/39 (69%), Positives = 29/39 (74%) Frame = +1 Query: 106 EXXAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQ 222 E LV+D GS M K GFAGDDAP+ VFP IVGRPRHQ Sbjct: 1354 EAPTPLVIDVGSHMWKVGFAGDDAPKGVFPPIVGRPRHQ 1392 >SB_49385| Best HMM Match : Actin (HMM E-Value=0.00022) Length = 921 Score = 58.0 bits (134), Expect = 8e-09 Identities = 29/73 (39%), Positives = 44/73 (60%), Gaps = 3/73 (4%) Frame = +1 Query: 91 FKMCDEXXAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVG--MGQKD-SYV 261 FK+ A+V+DNG G+ K GFAGD PR + P++VG P+ +++G + KD Sbjct: 693 FKLDSHYNRAIVLDNGCGISKIGFAGDRVPRIIQPAVVGNPQRFSMLIGDNVNVKDYKKY 752 Query: 262 GDEAQSKRGILTL 300 GD A +K G++ L Sbjct: 753 GDAAVAKSGVMHL 765 Score = 30.3 bits (65), Expect = 1.7 Identities = 14/23 (60%), Positives = 15/23 (65%) Frame = +1 Query: 508 QAVLSLYASGRTTGIVLDSGERC 576 Q LSLYASG T G+ L SG C Sbjct: 767 QLSLSLYASGMTLGVCLSSGFSC 789 >SB_43920| Best HMM Match : SRP-alpha_N (HMM E-Value=4.6) Length = 372 Score = 56.4 bits (130), Expect = 2e-08 Identities = 26/60 (43%), Positives = 34/60 (56%) Frame = +1 Query: 235 GMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLL 414 G+ D ++GDEA K T K+PI H IV +WD ME+ W + LR PE+H LL Sbjct: 278 GVEDLDFFIGDEAIDKPSYAT-KWPIRHAIVEDWDLMERFWEQCIFKYLRAEPEDHYFLL 336 >SB_3433| Best HMM Match : Actin (HMM E-Value=0.00011) Length = 580 Score = 48.0 bits (109), Expect = 8e-06 Identities = 27/90 (30%), Positives = 49/90 (54%), Gaps = 2/90 (2%) Frame = +1 Query: 115 AALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGIL 294 A LV+D G+ K GFA + APR++ P+ + + + + ++ ++GD+ + + Sbjct: 234 ATLVLDCGACSQKIGFASNQAPRSI-PNAIFKAKSE-------RRKLFIGDQIEECKDYS 285 Query: 295 TLKY--PIEHGIVTNWDDMEKIWHHTFYNE 378 L Y P + G + NWD ++IW +TF E Sbjct: 286 ALFYVLPFQKGFLVNWDVEKQIWDYTFGKE 315 >SB_13343| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 198 Score = 41.5 bits (93), Expect = 7e-04 Identities = 19/30 (63%), Positives = 24/30 (80%) Frame = -1 Query: 219 MAGPSHDRGEHGARSIISCETGLAHTGAIV 130 MA + D GE+G+ SI+S ETGLAHTGAI+ Sbjct: 1 MARSADDGGENGSGSIVSGETGLAHTGAII 30 >SB_28400| Best HMM Match : PMSR (HMM E-Value=1.7e-24) Length = 766 Score = 40.3 bits (90), Expect = 0.002 Identities = 20/68 (29%), Positives = 38/68 (55%) Frame = +1 Query: 352 IWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYA 531 I H F + L+V P +H V++T +E++ +I+ F A+Y+ Q++L++Y+ Sbjct: 513 ILEHAFLS-LKVDPVKHKVIMTIPQNTGLQEKEELVEILLGYFRVQAVYLQEQSILAMYS 571 Query: 532 SGRTTGIV 555 +GIV Sbjct: 572 YSAVSGIV 579 >SB_49291| Best HMM Match : Herpes_UL69 (HMM E-Value=4.5) Length = 491 Score = 33.9 bits (74), Expect = 0.14 Identities = 19/42 (45%), Positives = 21/42 (50%) Frame = -3 Query: 637 VQTQDGVGECVSFVDGHGVGDTVRRSPARYRWYDRTRTARAR 512 V DGVG CV DG G D R P YDR R +R+R Sbjct: 211 VDNDDGVGGCVDNDDGGGAADLQLRHPDP---YDRVRLSRSR 249 >SB_38756| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 220 Score = 31.5 bits (68), Expect = 0.76 Identities = 16/53 (30%), Positives = 28/53 (52%), Gaps = 2/53 (3%) Frame = +1 Query: 298 LKYPIEHGIVTNWDDMEKIWHHTFYNELRVAP--EEHPVLLTEAPLNPKANRE 450 L+ P + +VT+++ E++ H F + P HPV++TE NP R+ Sbjct: 131 LRTPFDRDVVTHYECQEQVLDHAFSHLGINTPGGVNHPVIMTEPVCNPNYCRQ 183 >SB_37540| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 120 Score = 31.5 bits (68), Expect = 0.76 Identities = 14/24 (58%), Positives = 16/24 (66%) Frame = -2 Query: 194 GNTARGASSPAKPALHIPEPLSTT 123 GNT R PAKPAL++P P S T Sbjct: 80 GNTNRRTRIPAKPALNLPSPPSKT 103 >SB_13911| Best HMM Match : PAN (HMM E-Value=0.033) Length = 534 Score = 31.5 bits (68), Expect = 0.76 Identities = 12/39 (30%), Positives = 25/39 (64%) Frame = +1 Query: 439 ANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIV 555 A +E++ +I+ F A+Y+ Q++L++Y+ +GIV Sbjct: 420 AKKEELVEILLGYFRVQAVYLQEQSILAMYSYSAVSGIV 458 >SB_18097| Best HMM Match : NadA (HMM E-Value=2.2) Length = 272 Score = 31.5 bits (68), Expect = 0.76 Identities = 24/68 (35%), Positives = 30/68 (44%), Gaps = 1/68 (1%) Frame = -1 Query: 342 VIPVSDDSVFDGVFEGQDTSFA-LCLISYIRVLLSHTDHHALMAGPSHDRGEHGARSIIS 166 V+PV S D + S +C V+LSH + H M D +HG RS S Sbjct: 193 VVPVFKKSSKDNPENYRPISLTCICCKVMEHVVLSHLNSHTAMNNILSDL-QHGFRSGFS 251 Query: 165 CETGLAHT 142 CET L T Sbjct: 252 CETQLVPT 259 >SB_5400| Best HMM Match : DUF1153 (HMM E-Value=7.8) Length = 170 Score = 31.5 bits (68), Expect = 0.76 Identities = 14/24 (58%), Positives = 16/24 (66%) Frame = -2 Query: 194 GNTARGASSPAKPALHIPEPLSTT 123 GNT R PAKPAL++P P S T Sbjct: 80 GNTNRRTRIPAKPALNLPSPPSKT 103 >SB_21074| Best HMM Match : NadA (HMM E-Value=2) Length = 358 Score = 31.1 bits (67), Expect = 1.00 Identities = 24/68 (35%), Positives = 30/68 (44%), Gaps = 1/68 (1%) Frame = -1 Query: 342 VIPVSDDSVFDGVFEGQDTSFA-LCLISYIRVLLSHTDHHALMAGPSHDRGEHGARSIIS 166 V+PV S D + S +C V+LSH + H M D +HG RS S Sbjct: 251 VVPVFKKSSKDNPENYRPISLTCICCKVMEHVVLSHLNSHTAMNNILSDL-QHGFRSGFS 309 Query: 165 CETGLAHT 142 CET L T Sbjct: 310 CETQLVLT 317 >SB_38372| Best HMM Match : RVT_1 (HMM E-Value=0) Length = 402 Score = 31.1 bits (67), Expect = 1.00 Identities = 24/68 (35%), Positives = 30/68 (44%), Gaps = 1/68 (1%) Frame = -1 Query: 342 VIPVSDDSVFDGVFEGQDTSFA-LCLISYIRVLLSHTDHHALMAGPSHDRGEHGARSIIS 166 V+PV S D + S +C V+LSH + H M D +HG RS S Sbjct: 71 VVPVFKKSSKDNPENYRPISLTCICCKVMEHVVLSHLNSHTAMNNILSDL-QHGFRSGFS 129 Query: 165 CETGLAHT 142 CET L T Sbjct: 130 CETQLVLT 137 >SB_2458| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 458 Score = 31.1 bits (67), Expect = 1.00 Identities = 24/68 (35%), Positives = 30/68 (44%), Gaps = 1/68 (1%) Frame = -1 Query: 342 VIPVSDDSVFDGVFEGQDTSFA-LCLISYIRVLLSHTDHHALMAGPSHDRGEHGARSIIS 166 V+PV S D + S +C V+LSH + H M D +HG RS S Sbjct: 105 VVPVFKKSSKDNPENYRPISLTCICCKVMEHVVLSHLNSHTAMNNILSDL-QHGFRSGFS 163 Query: 165 CETGLAHT 142 CET L T Sbjct: 164 CETQLVLT 171 >SB_47621| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 591 Score = 30.7 bits (66), Expect = 1.3 Identities = 24/68 (35%), Positives = 30/68 (44%), Gaps = 1/68 (1%) Frame = -1 Query: 342 VIPVSDDSVFDGVFEGQDTSFA-LCLISYIRVLLSHTDHHALMAGPSHDRGEHGARSIIS 166 V+PV S D + S +C V+LSH + H M D +HG RS S Sbjct: 388 VVPVFKKSGKDNPENYRPISLTCICCKVMEHVVLSHLNSHTAMNNILSDL-QHGFRSGFS 446 Query: 165 CETGLAHT 142 CET L T Sbjct: 447 CETQLVLT 454 >SB_15522| Best HMM Match : DUF590 (HMM E-Value=5.8) Length = 339 Score = 30.7 bits (66), Expect = 1.3 Identities = 24/68 (35%), Positives = 30/68 (44%), Gaps = 1/68 (1%) Frame = -1 Query: 342 VIPVSDDSVFDGVFEGQDTSFA-LCLISYIRVLLSHTDHHALMAGPSHDRGEHGARSIIS 166 V+PV S D + S +C V+LSH + H M D +HG RS S Sbjct: 229 VVPVFKKSGKDNPENYRPISLTCICCKVMEHVVLSHLNSHTAMNNILSDL-QHGFRSGFS 287 Query: 165 CETGLAHT 142 CET L T Sbjct: 288 CETQLVLT 295 >SB_4310| Best HMM Match : RVT_1 (HMM E-Value=5e-28) Length = 570 Score = 30.7 bits (66), Expect = 1.3 Identities = 23/68 (33%), Positives = 30/68 (44%), Gaps = 1/68 (1%) Frame = -1 Query: 342 VIPVSDDSVFDGVFEGQDTSFA-LCLISYIRVLLSHTDHHALMAGPSHDRGEHGARSIIS 166 V+PV S D + S +C ++LSH + H M D +HG RS S Sbjct: 153 VVPVFKKSSKDNPENYRPISLTCICCKVMEHIVLSHLNSHTAMNNILSDL-QHGFRSGFS 211 Query: 165 CETGLAHT 142 CET L T Sbjct: 212 CETQLVLT 219 >SB_56449| Best HMM Match : RVT_1 (HMM E-Value=0.28) Length = 419 Score = 30.3 bits (65), Expect = 1.7 Identities = 25/80 (31%), Positives = 35/80 (43%), Gaps = 4/80 (5%) Frame = -1 Query: 369 EGMMPNL---LHVIPVSDDSVFDGVFEGQDTSFA-LCLISYIRVLLSHTDHHALMAGPSH 202 EG +P + V+PV S D + S +C ++LSH + H L A Sbjct: 210 EGTLPKIWLNAMVVPVHKKSAKDQPQNYRPISLTCICCKIMEHIVLSHLNKH-LAANNIL 268 Query: 201 DRGEHGARSIISCETGLAHT 142 +HG R +SCET L T Sbjct: 269 SIFQHGFRQALSCETQLVLT 288 >SB_35780| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 749 Score = 30.3 bits (65), Expect = 1.7 Identities = 13/24 (54%), Positives = 16/24 (66%) Frame = -2 Query: 194 GNTARGASSPAKPALHIPEPLSTT 123 GNT R PAKP+L++P P S T Sbjct: 540 GNTNRRTRIPAKPSLNLPSPPSKT 563 >SB_10843| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 1259 Score = 30.3 bits (65), Expect = 1.7 Identities = 14/31 (45%), Positives = 16/31 (51%) Frame = +3 Query: 423 SPQPQGQQREDDPDHVRNIQHARHVRRHPSR 515 SP P+ R D+P V A HV HPSR Sbjct: 265 SPTPKRCVRFDEPPTVEKYSKASHVTEHPSR 295 >SB_9594| Best HMM Match : Extensin_2 (HMM E-Value=0.066) Length = 361 Score = 30.3 bits (65), Expect = 1.7 Identities = 27/94 (28%), Positives = 35/94 (37%), Gaps = 7/94 (7%) Frame = +2 Query: 365 PSTMS-CVSPPRNTQSC-SXXXXXXXXXXXXXXXXXC-SKHSTRPPCTSPSKPCSRCTRP 535 P+T+ C SPP + C S C S +T PC SP C P Sbjct: 268 PNTVRPCHSPPNTVRPCHSPPTAFRPCHSPPNTVRPCHSPPNTVRPCHSPPTAVRPCHSP 327 Query: 536 VVPPVSCWTPANGVSHTVPIYEGY----ALPHAI 625 C +P N V H +P Y A+PH + Sbjct: 328 PTAVRPCHSPPNTV-HPLPFPTKYLSTPAIPHQL 360 >SB_2746| Best HMM Match : RVT_1 (HMM E-Value=1.10002e-42) Length = 330 Score = 30.3 bits (65), Expect = 1.7 Identities = 25/80 (31%), Positives = 35/80 (43%), Gaps = 4/80 (5%) Frame = -1 Query: 369 EGMMPNL---LHVIPVSDDSVFDGVFEGQDTSFA-LCLISYIRVLLSHTDHHALMAGPSH 202 EG +P + V+PV S D + S +C ++LSH + H L A Sbjct: 71 EGTLPKIWLNAMVVPVHKKSAKDQPQNYRPISLTCICCKIMEHIVLSHLNKH-LAANNIL 129 Query: 201 DRGEHGARSIISCETGLAHT 142 +HG R +SCET L T Sbjct: 130 SIFQHGFRQALSCETQLVLT 149 >SB_2102| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 2396 Score = 30.3 bits (65), Expect = 1.7 Identities = 25/80 (31%), Positives = 35/80 (43%), Gaps = 4/80 (5%) Frame = -1 Query: 369 EGMMPNL---LHVIPVSDDSVFDGVFEGQDTSFA-LCLISYIRVLLSHTDHHALMAGPSH 202 EG +P + V+PV S D + S +C ++LSH + H L A Sbjct: 1609 EGTLPKIWLNAMVVPVHKKSAKDQPQNYRPISLTCICCKIMEHIVLSHLNKH-LAANNIL 1667 Query: 201 DRGEHGARSIISCETGLAHT 142 +HG R +SCET L T Sbjct: 1668 SIFQHGFRQALSCETQLVLT 1687 >SB_55880| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 859 Score = 30.3 bits (65), Expect = 1.7 Identities = 25/80 (31%), Positives = 35/80 (43%), Gaps = 4/80 (5%) Frame = -1 Query: 369 EGMMPNL---LHVIPVSDDSVFDGVFEGQDTSFA-LCLISYIRVLLSHTDHHALMAGPSH 202 EG +P + V+PV S D + S +C ++LSH + H L A Sbjct: 637 EGTLPKIWLNAMVVPVHKKSAKDQPQNYRPISLTCICCKIMEHIVLSHLNKH-LAANNIL 695 Query: 201 DRGEHGARSIISCETGLAHT 142 +HG R +SCET L T Sbjct: 696 SIFQHGFRQALSCETQLVLT 715 >SB_45157| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 2870 Score = 30.3 bits (65), Expect = 1.7 Identities = 12/32 (37%), Positives = 14/32 (43%) Frame = +2 Query: 488 PPCTSPSKPCSRCTRPVVPPVSCWTPANGVSH 583 PP P P T P +PP SC G S+ Sbjct: 973 PPLPPPPPPVQTTTAPTLPPASCMPTHEGTSN 1004 >SB_27518| Best HMM Match : RWD (HMM E-Value=0.015) Length = 277 Score = 30.3 bits (65), Expect = 1.7 Identities = 9/15 (60%), Positives = 13/15 (86%) Frame = +2 Query: 503 PSKPCSRCTRPVVPP 547 P++PCS CT+P +PP Sbjct: 220 PTEPCSLCTKPALPP 234 >SB_11764| Best HMM Match : DSHCT (HMM E-Value=1.9e-27) Length = 1492 Score = 30.3 bits (65), Expect = 1.7 Identities = 25/80 (31%), Positives = 35/80 (43%), Gaps = 4/80 (5%) Frame = -1 Query: 369 EGMMPNL---LHVIPVSDDSVFDGVFEGQDTSFA-LCLISYIRVLLSHTDHHALMAGPSH 202 EG +P + V+PV S D + S +C ++LSH + H L A Sbjct: 1047 EGTLPKIWLNAMVVPVHKKSAKDQPQNYRPISLTCICCKIMEHIVLSHLNKH-LAANNIL 1105 Query: 201 DRGEHGARSIISCETGLAHT 142 +HG R +SCET L T Sbjct: 1106 SIFQHGFRQALSCETQLVLT 1125 >SB_5114| Best HMM Match : RVT_1 (HMM E-Value=1.10002e-42) Length = 330 Score = 30.3 bits (65), Expect = 1.7 Identities = 25/80 (31%), Positives = 35/80 (43%), Gaps = 4/80 (5%) Frame = -1 Query: 369 EGMMPNL---LHVIPVSDDSVFDGVFEGQDTSFA-LCLISYIRVLLSHTDHHALMAGPSH 202 EG +P + V+PV S D + S +C ++LSH + H L A Sbjct: 71 EGTLPKIWLNAMVVPVHKKSAKDQPQNYRPISLTCICCKIMEHIVLSHLNKH-LAANNIL 129 Query: 201 DRGEHGARSIISCETGLAHT 142 +HG R +SCET L T Sbjct: 130 SIFQHGFRQALSCETQLVLT 149 >SB_38460| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 181 Score = 29.9 bits (64), Expect = 2.3 Identities = 18/45 (40%), Positives = 22/45 (48%) Frame = -1 Query: 276 LCLISYIRVLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 142 +C V+LSH + H M D +HG RS SCET L T Sbjct: 94 ICCKVMEHVVLSHLNSHTAMNNILSDL-QHGFRSGFSCETQLVLT 137 >SB_37909| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 142 Score = 29.5 bits (63), Expect = 3.0 Identities = 16/45 (35%), Positives = 22/45 (48%) Frame = +3 Query: 504 HPSRALAVRVRSYHRYRAGLRRTVSPTPCPSTKDTHSPTPSCVWT 638 HP+R L R + + + A R+T PC DT P+ C WT Sbjct: 33 HPTR-LETRTKESNIHLA--RKTSRDYPCAYAHDTDQPSDLCQWT 74 >SB_24270| Best HMM Match : DUF1604 (HMM E-Value=5.2) Length = 329 Score = 29.1 bits (62), Expect = 4.0 Identities = 22/68 (32%), Positives = 30/68 (44%), Gaps = 1/68 (1%) Frame = -1 Query: 342 VIPVSDDSVFDGVFEGQDTSFA-LCLISYIRVLLSHTDHHALMAGPSHDRGEHGARSIIS 166 V+PV S D + S +C ++LSH + H L A +HG R +S Sbjct: 204 VVPVHKKSAKDQPQNYRPISLTCICCKIMEHIVLSHLNKH-LAANNILSIFQHGFRQALS 262 Query: 165 CETGLAHT 142 CET L T Sbjct: 263 CETQLVLT 270 >SB_10927| Best HMM Match : RVT_1 (HMM E-Value=6.6e-39) Length = 452 Score = 29.1 bits (62), Expect = 4.0 Identities = 22/68 (32%), Positives = 30/68 (44%), Gaps = 1/68 (1%) Frame = -1 Query: 342 VIPVSDDSVFDGVFEGQDTSFA-LCLISYIRVLLSHTDHHALMAGPSHDRGEHGARSIIS 166 V+PV S D + S +C ++LSH + H L A +HG R +S Sbjct: 2 VVPVHKKSAKDQPQNYRPISLTCICCKIMEHIVLSHLNKH-LAANNILSIFQHGFRQALS 60 Query: 165 CETGLAHT 142 CET L T Sbjct: 61 CETQLVLT 68 >SB_28336| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 376 Score = 28.7 bits (61), Expect = 5.3 Identities = 12/43 (27%), Positives = 23/43 (53%) Frame = +1 Query: 427 LNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIV 555 + PK ++ ++F F P M +A++ + A+G TGI+ Sbjct: 174 ITPKRATSQIIFVLFCIFGLPVMMLALKTAGDIIAAGLKTGII 216 >SB_28979| Best HMM Match : RVT_1 (HMM E-Value=1.6e-40) Length = 892 Score = 28.3 bits (60), Expect = 7.0 Identities = 19/46 (41%), Positives = 24/46 (52%), Gaps = 2/46 (4%) Frame = -1 Query: 282 FALCLISYI--RVLLSHTDHHALMAGPSHDRGEHGARSIISCETGL 151 FA CL + V+LSH + H L A +HG R+ SCET L Sbjct: 462 FATCLACKVMKHVVLSHLNKH-LAAHNIISNLQHGFRAGFSCETQL 506 >SB_20462| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 130 Score = 28.3 bits (60), Expect = 7.0 Identities = 13/24 (54%), Positives = 15/24 (62%) Frame = -2 Query: 194 GNTARGASSPAKPALHIPEPLSTT 123 GNT R AKPAL++P P S T Sbjct: 40 GNTNRRTRIQAKPALNLPSPPSKT 63 >SB_11603| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 635 Score = 28.3 bits (60), Expect = 7.0 Identities = 13/24 (54%), Positives = 14/24 (58%) Frame = -2 Query: 194 GNTARGASSPAKPALHIPEPLSTT 123 GNT R PAKP L IP P + T Sbjct: 68 GNTNRRTRIPAKPTLTIPSPPTKT 91 >SB_12670| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 1272 Score = 28.3 bits (60), Expect = 7.0 Identities = 21/69 (30%), Positives = 29/69 (42%), Gaps = 1/69 (1%) Frame = +3 Query: 423 SPQPQGQQREDDPDHVRNIQHARHVRRHPSRALAVRVRSYHRYRAGLRRTVSPTPCPSTK 602 SP+ + ++ P R + RR S + R R Y RR SPTP P + Sbjct: 861 SPEHRRRREASPPRRDRKRYDSPPRRRRRSPSPPPRRRRRDSYSPSRRRRDSPTPSPPPR 920 Query: 603 DTH-SPTPS 626 SP+PS Sbjct: 921 RRRKSPSPS 929 >SB_12126| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 109 Score = 27.9 bits (59), Expect = 9.3 Identities = 16/40 (40%), Positives = 20/40 (50%), Gaps = 2/40 (5%) Frame = +2 Query: 485 RPPCTSPSKPCSRCTRPVVPPVSC-WTP-ANGVSHTVPIY 598 R P +PS+ C R R VV V W+P V H+ P Y Sbjct: 46 REPRETPSQECLRLRRLVVMSVLLWWSPTCESVGHSFPYY 85 >SB_10665| Best HMM Match : PT (HMM E-Value=6.2) Length = 215 Score = 27.9 bits (59), Expect = 9.3 Identities = 14/35 (40%), Positives = 16/35 (45%), Gaps = 1/35 (2%) Frame = +1 Query: 580 PHRAHLRRIRTPPR-HPASGLNRSRPHRLPHEDPH 681 PHR H+ RTP R H PH P +PH Sbjct: 161 PHRPHMDPTRTPHRPHMDPTRTSHGPHTDPTRNPH 195 Database: nematostella Posted date: Oct 22, 2007 1:22 PM Number of letters in database: 16,821,457 Number of sequences in database: 59,808 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 25,870,236 Number of Sequences: 59808 Number of extensions: 654639 Number of successful extensions: 2385 Number of sequences better than 10.0: 51 Number of HSP's better than 10.0 without gapping: 2039 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 2351 length of database: 16,821,457 effective HSP length: 80 effective length of database: 12,036,817 effective search space used: 2034222073 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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