BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= brP-0634 (750 letters) Database: bee 438 sequences; 146,343 total letters Searching......................................................done Score E Sequences producing significant alignments: (bits) Value AB264313-1|BAF43600.1| 900|Apis mellifera ecdysone-induced prot... 25 1.0 AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic ac... 23 3.1 AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precurso... 23 3.1 AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein pr... 22 5.3 AB013288-1|BAA87894.1| 149|Apis mellifera protein kinase C prot... 21 9.3 >AB264313-1|BAF43600.1| 900|Apis mellifera ecdysone-induced protein 75 protein. Length = 900 Score = 24.6 bits (51), Expect = 1.0 Identities = 10/26 (38%), Positives = 14/26 (53%) Frame = +3 Query: 549 YRAGLRRTVSPTPCPSTKDTHSPTPS 626 +RA L +T P CP + SP+ S Sbjct: 555 HRASLSKTPQPPQCPRFRKLDSPSDS 580 >AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic acetylcholine receptoralpha7-1 protein. Length = 555 Score = 23.0 bits (47), Expect = 3.1 Identities = 18/55 (32%), Positives = 20/55 (36%), Gaps = 3/55 (5%) Frame = +1 Query: 553 VLDSGERCLP-HRAHLRRI-RTP-PRHPASGLNRSRPHRLPHEDPHRARLLVHYH 708 VLD + L H L + TP P H G S H PH A H H Sbjct: 390 VLDLEDNALASHNNLLNNVYSTPGPHHHTMGHGHSHIHATPHHHHSHAATPHHQH 444 >AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precursor protein. Length = 1770 Score = 23.0 bits (47), Expect = 3.1 Identities = 10/26 (38%), Positives = 15/26 (57%) Frame = +1 Query: 379 LRVAPEEHPVLLTEAPLNPKANREKM 456 LR+ P H V+ T +NP + EK+ Sbjct: 1461 LRLGPCWHAVMTTYPRINPDNHNEKL 1486 >AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein protein. Length = 1308 Score = 22.2 bits (45), Expect = 5.3 Identities = 9/24 (37%), Positives = 13/24 (54%) Frame = +2 Query: 674 ILTERGYSFTTTAERXNRS*HQGK 745 +L ++G TTA N+ QGK Sbjct: 1132 LLAQKGLKLATTASHANQLNRQGK 1155 >AB013288-1|BAA87894.1| 149|Apis mellifera protein kinase C protein. Length = 149 Score = 21.4 bits (43), Expect = 9.3 Identities = 7/10 (70%), Positives = 8/10 (80%) Frame = +1 Query: 142 GMCKAGFAGD 171 GMCK G +GD Sbjct: 130 GMCKEGISGD 139 Database: bee Posted date: Oct 23, 2007 1:17 PM Number of letters in database: 146,343 Number of sequences in database: 438 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 221,499 Number of Sequences: 438 Number of extensions: 5430 Number of successful extensions: 10 Number of sequences better than 10.0: 5 Number of HSP's better than 10.0 without gapping: 10 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 10 length of database: 146,343 effective HSP length: 56 effective length of database: 121,815 effective search space used: 23510295 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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