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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brP-0633
         (750 letters)

Database: nematostella 
           59,808 sequences; 16,821,457 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SB_14682| Best HMM Match : No HMM Matches (HMM E-Value=.)             239   2e-63
SB_37200| Best HMM Match : No HMM Matches (HMM E-Value=.)             202   3e-52
SB_48561| Best HMM Match : AAA (HMM E-Value=0)                        177   1e-44
SB_45627| Best HMM Match : AAA (HMM E-Value=0)                        173   1e-43
SB_7424| Best HMM Match : AAA (HMM E-Value=0)                         167   6e-42
SB_55690| Best HMM Match : AAA (HMM E-Value=0)                        165   3e-41
SB_49367| Best HMM Match : AAA (HMM E-Value=0)                        165   3e-41
SB_40956| Best HMM Match : No HMM Matches (HMM E-Value=.)             156   2e-38
SB_3115| Best HMM Match : AAA (HMM E-Value=0)                         155   3e-38
SB_33442| Best HMM Match : AAA (HMM E-Value=0)                        151   6e-37
SB_732| Best HMM Match : AAA (HMM E-Value=0)                          145   3e-35
SB_9909| Best HMM Match : AAA (HMM E-Value=0)                         135   4e-32
SB_17703| Best HMM Match : Mito_carr (HMM E-Value=0)                  124   8e-29
SB_56202| Best HMM Match : No HMM Matches (HMM E-Value=.)             116   3e-26
SB_28977| Best HMM Match : AAA (HMM E-Value=0)                        114   8e-26
SB_5903| Best HMM Match : No HMM Matches (HMM E-Value=.)              109   2e-24
SB_3919| Best HMM Match : No HMM Matches (HMM E-Value=.)              107   7e-24
SB_19460| Best HMM Match : AAA (HMM E-Value=0)                         93   3e-19
SB_35704| Best HMM Match : No HMM Matches (HMM E-Value=.)              81   1e-15
SB_33584| Best HMM Match : No HMM Matches (HMM E-Value=.)              65   7e-11
SB_31892| Best HMM Match : AAA (HMM E-Value=6.2e-25)                   63   3e-10
SB_33907| Best HMM Match : No HMM Matches (HMM E-Value=.)              58   1e-08
SB_30385| Best HMM Match : No HMM Matches (HMM E-Value=.)              57   1e-08
SB_46732| Best HMM Match : AAA (HMM E-Value=0.044)                     57   2e-08
SB_6656| Best HMM Match : No HMM Matches (HMM E-Value=.)               53   2e-07
SB_32582| Best HMM Match : No HMM Matches (HMM E-Value=.)              40   0.002
SB_25516| Best HMM Match : AAA_2 (HMM E-Value=0)                       39   0.004
SB_3478| Best HMM Match : No HMM Matches (HMM E-Value=.)               39   0.004
SB_11032| Best HMM Match : AAA (HMM E-Value=3.5)                       38   0.007
SB_21493| Best HMM Match : No HMM Matches (HMM E-Value=.)              33   0.19 
SB_26897| Best HMM Match : AAA (HMM E-Value=4.2e-12)                   33   0.33 
SB_59437| Best HMM Match : AAA (HMM E-Value=7.4e-08)                   33   0.33 
SB_54124| Best HMM Match : AAA (HMM E-Value=7.8e-08)                   32   0.43 
SB_43853| Best HMM Match : AAA_5 (HMM E-Value=0)                       32   0.43 
SB_380| Best HMM Match : AAA (HMM E-Value=0.14)                        31   0.76 
SB_35973| Best HMM Match : zf-CCHC (HMM E-Value=0.0026)                31   1.00 
SB_379| Best HMM Match : ADK (HMM E-Value=3.2e-05)                     31   1.00 
SB_58910| Best HMM Match : No HMM Matches (HMM E-Value=.)              30   1.7  
SB_34154| Best HMM Match : UvrD-helicase (HMM E-Value=0.064)           30   1.7  
SB_58663| Best HMM Match : No HMM Matches (HMM E-Value=.)              30   2.3  
SB_8371| Best HMM Match : Vicilin_N (HMM E-Value=0.11)                 30   2.3  
SB_57268| Best HMM Match : No HMM Matches (HMM E-Value=.)              29   3.0  
SB_51808| Best HMM Match : OmpA (HMM E-Value=0.72)                     29   3.0  
SB_46519| Best HMM Match : DUF720 (HMM E-Value=0.49)                   29   3.0  
SB_44158| Best HMM Match : OmpA (HMM E-Value=0.72)                     29   3.0  
SB_42682| Best HMM Match : OmpA (HMM E-Value=0.72)                     29   3.0  
SB_25694| Best HMM Match : RVT_1 (HMM E-Value=1.9e-22)                 29   3.0  
SB_10656| Best HMM Match : No HMM Matches (HMM E-Value=.)              29   3.0  
SB_4259| Best HMM Match : No HMM Matches (HMM E-Value=.)               29   3.0  
SB_42068| Best HMM Match : No HMM Matches (HMM E-Value=.)              29   3.0  
SB_36695| Best HMM Match : No HMM Matches (HMM E-Value=.)              29   3.0  
SB_19755| Best HMM Match : No HMM Matches (HMM E-Value=.)              29   3.0  
SB_16760| Best HMM Match : OmpA (HMM E-Value=0.72)                     29   3.0  
SB_15796| Best HMM Match : RVT_1 (HMM E-Value=0.00082)                 29   3.0  
SB_10418| Best HMM Match : No HMM Matches (HMM E-Value=.)              29   3.0  
SB_23422| Best HMM Match : Propeptide_C1 (HMM E-Value=7.2)             29   4.0  
SB_27721| Best HMM Match : CRPA (HMM E-Value=2.4)                      28   7.0  
SB_16306| Best HMM Match : No HMM Matches (HMM E-Value=.)              28   7.0  
SB_13937| Best HMM Match : zf-CCCH (HMM E-Value=0.0017)                28   7.0  
SB_3294| Best HMM Match : DUF755 (HMM E-Value=0.22)                    28   7.0  
SB_38518| Best HMM Match : No HMM Matches (HMM E-Value=.)              28   9.3  
SB_26376| Best HMM Match : No HMM Matches (HMM E-Value=.)              28   9.3  
SB_10624| Best HMM Match : No HMM Matches (HMM E-Value=.)              28   9.3  
SB_8559| Best HMM Match : Dpy-30 (HMM E-Value=3.7e-11)                 28   9.3  

>SB_14682| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 802

 Score =  239 bits (584), Expect = 2e-63
 Identities = 128/255 (50%), Positives = 168/255 (65%), Gaps = 7/255 (2%)
 Frame = +3

Query: 6    GVKPPRGILMYGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEA 185
            GV PPRGIL+YGP GTGKT+IARAVANETG  FF INGPE++S+  GE+E+ LR+ F EA
Sbjct: 286  GVPPPRGILLYGPSGTGKTMIARAVANETGVHFFCINGPEVLSRYYGETEARLREIFTEA 345

Query: 186  DKNSPAIIFIDELDAIAPKREKTHGEVERRIVSQLLTLMDGMKKSS---HVIVMAATNRP 356
               SP+I+FIDELDA+ P+R+K   E ERR+V+ LLTLMDGM   S   +V+V+AATNRP
Sbjct: 346  QNKSPSIVFIDELDALCPRRDKVQNEFERRVVATLLTLMDGMHMKSTDTYVMVLAATNRP 405

Query: 357  NSIDPALRRFGRFDREIDIGIPDATGRLEILRIHTKNMKLG-DDVDLXQIAAESHGHVGA 533
            +++DPALRR GRFDREI+IGIP  T R +IL    KN+     D D+  +A  +HG+VGA
Sbjct: 406  DALDPALRRPGRFDREIEIGIPSVTDRRDILVTLLKNVPHSLHDEDISSLAESAHGYVGA 465

Query: 534  DLASLCSEAALQQIREKMDLIDLEDDQ-IDARGSQFS-GCLHG*LPVRND-EIVXVGVT* 704
            DLA+ C EA+L   +  +   D    Q ++ R ++     L     +R     V      
Sbjct: 466  DLAAACKEASLYAFKRSLHNHDNGSSQSLEQRDARIKRELLVSSEDMRAAFRCVRPSAMR 525

Query: 705  DSGGEVPNVTWTDIG 749
            +   EVP V W+D+G
Sbjct: 526  EVALEVPKVHWSDVG 540



 Score =  186 bits (454), Expect = 1e-47
 Identities = 95/202 (47%), Positives = 131/202 (64%), Gaps = 1/202 (0%)
 Frame = +3

Query: 3    IGVKPPRGILMYGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEE 182
            +G++PPRGILMYGPPG  KTLIARA+A E+G  F  I GPE+ SK  GESE  +R+ F +
Sbjct: 566  LGIRPPRGILMYGPPGCSKTLIARALATESGLNFIAIKGPELFSKWVGESEKAVREVFLK 625

Query: 183  ADKNSPAIIFIDELDAIAPKREKTHG-EVERRIVSQLLTLMDGMKKSSHVIVMAATNRPN 359
            A   +P+I+F DELDAIA +R  T G +V  R+++QLLT +DG++    VI +AATNRP+
Sbjct: 626  ARATAPSIVFFDELDAIAGQRNSTGGSDVNDRVLTQLLTELDGVETLKDVIFIAATNRPD 685

Query: 360  SIDPALRRFGRFDREIDIGIPDATGRLEILRIHTKNMKLGDDVDLXQIAAESHGHVGADL 539
             ID AL R GR DR I + +P    R  IL IH         +DL  +   + G+ GA++
Sbjct: 686  MIDKALMRPGRVDRLIYVPLPCWDTRRHILEIHLARTPCEGSLDLEDLVERTEGYSGAEI 745

Query: 540  ASLCSEAALQQIREKMDLIDLE 605
            A++C EAAL  ++E +    +E
Sbjct: 746  AAVCREAALAALQENIQAESVE 767


>SB_37200| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 908

 Score =  202 bits (492), Expect = 3e-52
 Identities = 99/198 (50%), Positives = 131/198 (66%), Gaps = 3/198 (1%)
 Frame = +3

Query: 3   IGVKPPRGILMYGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEE 182
           +G+  P+GIL+ G PG GKTL+      + G      NG ++    AGESE NLR+ F +
Sbjct: 240 LGINGPKGILLVGAPGVGKTLLVHKATVDCGIKLVSTNGTDVFGPHAGESEENLRRVFNK 299

Query: 183 A---DKNSPAIIFIDELDAIAPKREKTHGEVERRIVSQLLTLMDGMKKSSHVIVMAATNR 353
           A    +  P ++FIDELDA+ PKR  +  E E RIV+QLLTLMDG++    VIV+ ATNR
Sbjct: 300 ARYASRFGPCVLFIDELDALCPKRGSSGNEEENRIVAQLLTLMDGLESRGRVIVIGATNR 359

Query: 354 PNSIDPALRRFGRFDREIDIGIPDATGRLEILRIHTKNMKLGDDVDLXQIAAESHGHVGA 533
           PN++DPALRR GRFDRE+ IG+P A  RL+ILR H K + L  DVDL  +A  + G+VGA
Sbjct: 360 PNALDPALRRPGRFDREVVIGVPSAGQRLDILRAHCKPINLSVDVDLTHLAEITVGYVGA 419

Query: 534 DLASLCSEAALQQIREKM 587
           DLASLC +AA   ++  +
Sbjct: 420 DLASLCQQAAFAALKRSL 437



 Score = 79.4 bits (187), Expect = 3e-15
 Identities = 41/109 (37%), Positives = 67/109 (61%)
 Frame = +3

Query: 3   IGVKPPRGILMYGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEE 182
           +G++ PRG+L+YGPPG  KT + RA A+ T   F  ++  ++ S   G++E  LR    E
Sbjct: 513 MGLRRPRGVLLYGPPGCCKTTLVRAAASSTHCTFMSLSCAQLFSSYVGDAERTLR----E 568

Query: 183 ADKNSPAIIFIDELDAIAPKREKTHGEVERRIVSQLLTLMDGMKKSSHV 329
                P ++F+DELD++A KR    G +E R+++ LL  MDG+  S+++
Sbjct: 569 LVLQLPLLLFLDELDSLAGKRGNNLG-METRLLATLLNEMDGVGVSANI 616



 Score = 74.5 bits (175), Expect = 8e-14
 Identities = 40/77 (51%), Positives = 50/77 (64%)
 Frame = +3

Query: 327 VIVMAATNRPNSIDPALRRFGRFDREIDIGIPDATGRLEILRIHTKNMKLGDDVDLXQIA 506
           +I++AATNRP +ID AL R GR D  I +  PD   RLEILR+HT+   L  DVDL  IA
Sbjct: 699 LILVAATNRPEAIDGALLRPGRIDCMIYVPPPDMKARLEILRVHTRFSPLAPDVDLSVIA 758

Query: 507 AESHGHVGADLASLCSE 557
             +  + GADL +LC E
Sbjct: 759 EGTELYSGADLENLCRE 775


>SB_48561| Best HMM Match : AAA (HMM E-Value=0)
          Length = 2021

 Score =  177 bits (430), Expect = 1e-44
 Identities = 90/198 (45%), Positives = 123/198 (62%), Gaps = 6/198 (3%)
 Frame = +3

Query: 9    VKPPRGILMYGPPGTGKTLIARAVANETG-----AFFFLINGPEIMSKLAGESESNLRKA 173
            + PPRG+L +GPPGTGKTL+ARA+ANE         FF+  G + +SK  GESE  LR  
Sbjct: 915  ITPPRGVLFFGPPGTGKTLVARALANECSQGDKKVSFFMRKGADCLSKWVGESERQLRLL 974

Query: 174  FEEADKNSPAIIFIDELDAIAPKREKTHGEVERRIVSQLLTLMDGMKKSSHVIVMAATNR 353
            F++A    P+IIF DE+D +AP R     ++   IVS LL LMDG+     V+++ ATNR
Sbjct: 975  FDQAYAMRPSIIFFDEIDGLAPVRSSRQDQIHSSIVSTLLALMDGLDSRGEVVIIGATNR 1034

Query: 354  PNSIDPALRRFGRFDREIDIGIPDATGRLEILRIHTKNMKLG-DDVDLXQIAAESHGHVG 530
             ++IDPALRR GRFDRE    +PD   R  IL IHT+  +       + ++A    G+ G
Sbjct: 1035 IDAIDPALRRPGRFDREFQFALPDRDARRSILSIHTREWEPRLSQRFISELADYCVGYCG 1094

Query: 531  ADLASLCSEAALQQIREK 584
            AD+ +LC+EAAL  +R +
Sbjct: 1095 ADIKALCTEAALCALRRR 1112


>SB_45627| Best HMM Match : AAA (HMM E-Value=0)
          Length = 628

 Score =  173 bits (422), Expect = 1e-43
 Identities = 105/173 (60%), Positives = 116/173 (67%), Gaps = 5/173 (2%)
 Frame = +3

Query: 246 EKTHGEVERRIVSQLLTLMDGMKKSSHVIVMAATNRPNSIDPALRRFGRFDREIDIGIPD 425
           ++THGEVERRIVSQLLTLMDG+K+ SHVIVMAATNRPNS+D ALRRFGRFDRE+DIGIPD
Sbjct: 171 KETHGEVERRIVSQLLTLMDGLKQRSHVIVMAATNRPNSVDVALRRFGRFDREVDIGIPD 230

Query: 426 ATGRLEILRIHTKNMKLGDDVDLXQIAAESHGHVGADLASLCSEAALQQIREKMDLIDLE 605
           ATGRLEILRIHTKNMKLGDDVDL Q                        IREKMDLIDLE
Sbjct: 231 ATGRLEILRIHTKNMKLGDDVDLEQ------------------------IREKMDLIDLE 266

Query: 606 DDQIDARGSQFSGCLHG*LPVRNDEIVXVGVT*DSG-----GEVPNVTWTDIG 749
           D+ IDA        L       +D    +GV+  S       EVPNV+W DIG
Sbjct: 267 DETIDAE------VLDSLAVSMDDFRYAMGVSNPSALRETVVEVPNVSWDDIG 313



 Score =  158 bits (384), Expect = 4e-39
 Identities = 87/209 (41%), Positives = 124/209 (59%), Gaps = 4/209 (1%)
 Frame = +3

Query: 6   GVKPPRGILMYGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEA 185
           G+ P +G+L YGPPG GKTL+A+A+ANE  A F  I GPE+++   GESE+N+R  F++A
Sbjct: 340 GMTPSKGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELLTMWFGESEANVRDVFDKA 399

Query: 186 DKNSPAIIFIDELDAIAPKREKTHGE---VERRIVSQLLTLMDGMKKSSHVIVMAATNRP 356
              +P ++F DELD+IA  R    G+      R+++Q+LT MDGM    +V ++ ATNRP
Sbjct: 400 RSAAPCVLFFDELDSIAKSRGGNVGDGGGAADRVINQVLTEMDGMNVKKNVFIIGATNRP 459

Query: 357 NSIDPALRRFGRFDREIDIGIPDATGRLEILRIHTKNMKLGDDVDLXQIAAESHGHVGAD 536
           + IDPA+ R GR D+ I I +PD                   DVDL  +A  +HG  GAD
Sbjct: 460 DIIDPAILRPGRLDQLIYIPLPD-----------------DGDVDLDYVAKVTHGFSGAD 502

Query: 537 LASLCSEAALQQIREKMDL-IDLEDDQID 620
           L  +C  A    IRE ++  I+ E  ++D
Sbjct: 503 LTEICQRACKLAIREAIETDINREKQRVD 531



 Score = 46.4 bits (105), Expect = 2e-05
 Identities = 27/41 (65%), Positives = 30/41 (73%)
 Frame = +1

Query: 589 ISLTSRTIRLTPEVLNSLAVSMDNFRYAMTKSSXSALRETV 711
           I L   TI    EVL+SLAVSMD+FRYAM  S+ SALRETV
Sbjct: 263 IDLEDETI--DAEVLDSLAVSMDDFRYAMGVSNPSALRETV 301


>SB_7424| Best HMM Match : AAA (HMM E-Value=0)
          Length = 294

 Score =  167 bits (407), Expect = 6e-42
 Identities = 87/194 (44%), Positives = 124/194 (63%), Gaps = 6/194 (3%)
 Frame = +3

Query: 3   IGVKPPRGILMYGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEE 182
           +G K P+G ++ GPPGTGKTL+A+AVA E G  F  I+G E +    G   + +R  F +
Sbjct: 76  LGAKIPKGAILSGPPGTGKTLLAKAVAGEAGVPFLSISGSEFLEMFVGVGPARVRDLFAQ 135

Query: 183 ADKNSPAIIFIDELDAIAPKREK---THGEVER-RIVSQLLTLMDGMKKSSHVIVMAATN 350
           A KN+P IIFIDE+DA+   R +     G  ER   ++QLL  MDG   S++V+V++ TN
Sbjct: 136 ARKNAPCIIFIDEIDAVGRARGRGGQFGGHDERENTLNQLLVEMDGFSSSTNVVVLSGTN 195

Query: 351 RPNSIDPALRRFGRFDREIDIGIPDATGRLEILRIHTKNMKLGDDVD--LXQIAAESHGH 524
           RP+ +DPAL R GRFDR+I +  PD  GR  I ++H K +K   D +    ++AA + G 
Sbjct: 196 RPDVLDPALLRPGRFDRQIHLPAPDIKGRCSIFKVHLKPIKKNVDEEKLARKMAALTPGF 255

Query: 525 VGADLASLCSEAAL 566
            GAD+A++C+EAAL
Sbjct: 256 TGADIANVCNEAAL 269


>SB_55690| Best HMM Match : AAA (HMM E-Value=0)
          Length = 1031

 Score =  165 bits (402), Expect = 3e-41
 Identities = 85/199 (42%), Positives = 117/199 (58%)
 Frame = +3

Query: 24   GILMYGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEADKNSPA 203
            G+L+YGPPGTGKTL+A  VA E G  F  I GPE++SK  G SE  +R  F  A    P 
Sbjct: 703  GLLLYGPPGTGKTLLAGVVAKECGLNFISIKGPELLSKYIGASEQAVRDMFTRAQSAKPC 762

Query: 204  IIFIDELDAIAPKREKTHGEVERRIVSQLLTLMDGMKKSSHVIVMAATNRPNSIDPALRR 383
            I+F DE D++AP+R      V  R+V+QLLT +DG++    V ++AAT+RP+ IDPAL R
Sbjct: 763  ILFFDEFDSLAPRRGHDSTGVTDRVVNQLLTQLDGVEGLKGVYILAATSRPDLIDPALLR 822

Query: 384  FGRFDREIDIGIPDATGRLEILRIHTKNMKLGDDVDLXQIAAESHGHVGADLASLCSEAA 563
             GR D+ +   IPD   R E+ R  + ++ L DD+DL  I+   H   GAD+ +L   + 
Sbjct: 823  PGRLDKCVYCPIPDQGDRREVFRALSHDLPLADDIDLDSISDSCHHFTGADIKALLYNSQ 882

Query: 564  LQQIREKMDLIDLEDDQID 620
            L+ I      I L    +D
Sbjct: 883  LEAIHRTTSKIKLYGGVLD 901


>SB_49367| Best HMM Match : AAA (HMM E-Value=0)
          Length = 976

 Score =  165 bits (401), Expect = 3e-41
 Identities = 79/151 (52%), Positives = 107/151 (70%), Gaps = 2/151 (1%)
 Frame = +3

Query: 3    IGVKPPRGILMYGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEE 182
            +GV P  G L++GPPG GKTL+A A+A E    F  +   EI+S ++GESE  +R+ F  
Sbjct: 705  LGVTPTTGFLLHGPPGCGKTLLAHAIAGELEMPFLKLAATEIVSGVSGESEEKVRELFTS 764

Query: 183  ADKNSPAIIFIDELDAIAPKREKTHGEVERRIVSQLLTLMDGMKKS--SHVIVMAATNRP 356
            A   +P I+F+DE+DAI PKRE    ++ERRIVSQLL+ MD +  +  +HV+V+ ATNRP
Sbjct: 765  AVAQAPCILFLDEIDAITPKRENASKDMERRIVSQLLSCMDDLNNNPDAHVLVIGATNRP 824

Query: 357  NSIDPALRRFGRFDREIDIGIPDATGRLEIL 449
            +S+DPALRR GRFDREI +GIPD + R  I+
Sbjct: 825  DSLDPALRRAGRFDREISMGIPDESARARIV 855


>SB_40956| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 1086

 Score =  156 bits (379), Expect = 2e-38
 Identities = 81/189 (42%), Positives = 121/189 (64%), Gaps = 4/189 (2%)
 Frame = +3

Query: 24   GILMYGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEADKNSPA 203
            G+L+YGPPGTGKTL+A+AVA E    F  + GPE+++   G+SE N+R+ F  A   SP 
Sbjct: 846  GVLLYGPPGTGKTLMAKAVATECSLNFLSVKGPELINMYVGQSEQNVREVFSRAQAASPC 905

Query: 204  IIFIDELDAIAPKREKT--HGEVERRIVSQLLTLMDGMKKSSHVIVMAATNRPNSIDPAL 377
            +IF DELD++AP R ++   G V  R+V+QLL  +DG+  +  V V+ ATNRP+ +DPAL
Sbjct: 906  VIFFDELDSLAPNRGRSGDSGGVMDRVVAQLLAELDGLHSTCDVFVIGATNRPDLLDPAL 965

Query: 378  RRFGRFDREIDIGI-PDATGRLEILRIHTKNMKLGDDVDLXQIAAESHGHV-GADLASLC 551
             R GRFD+ + +G+  D   +L +L+  T+      D  L + A +   ++ GADL ++ 
Sbjct: 966  LRPGRFDKLLYLGVSEDHHAQLSVLKALTRKFTFSADFRLEEFANKLPLNLTGADLYAMA 1025

Query: 552  SEAALQQIR 578
            S+A LQ +R
Sbjct: 1026 SDALLQAMR 1034


>SB_3115| Best HMM Match : AAA (HMM E-Value=0)
          Length = 913

 Score =  155 bits (377), Expect = 3e-38
 Identities = 85/209 (40%), Positives = 123/209 (58%), Gaps = 7/209 (3%)
 Frame = +3

Query: 3   IGVKPPRGILMYGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEE 182
           +G K P+G L+ GPPGTGKTL+A+AVA E    F  + G + +   AG   + +R  F  
Sbjct: 153 LGAKIPKGALLVGPPGTGKTLLAKAVATEADVPFLSMAGSDFVEMFAGVGSARVRDLFTR 212

Query: 183 ADKNSPAIIFIDELDAIAPKREKT-----HGEVERRIVSQLLTLMDGMKKSSHVIVMAAT 347
           A K +P I++IDE+DAI   R+ +     H E E  + +QLL  MDGM     VI++A+T
Sbjct: 213 ARKLAPCIVYIDEVDAIGRSRKSSRSMGGHNEQENTL-NQLLVEMDGMNTLDGVIMLAST 271

Query: 348 NRPNSIDPALRRFGRFDREIDIGIPDATGRLEILRIHTKNMKLGDDVD--LXQIAAESHG 521
           NR + +D AL R GRFDR I I +P    R+EI  +H K + L   +D    ++A  + G
Sbjct: 272 NRADILDNALLRPGRFDRHIAIDLPTLPERMEIFEVHLKKLTLKRSIDQYTKRLAELTPG 331

Query: 522 HVGADLASLCSEAALQQIREKMDLIDLED 608
           H GAD+A++C+EAAL   R     +D ++
Sbjct: 332 HSGADIANICNEAALHAARLNKKNVDTKN 360


>SB_33442| Best HMM Match : AAA (HMM E-Value=0)
          Length = 369

 Score =  151 bits (366), Expect = 6e-37
 Identities = 79/167 (47%), Positives = 110/167 (65%), Gaps = 3/167 (1%)
 Frame = +3

Query: 3   IGVKPPRGILMYGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEE 182
           IG+ PPRG+L+YGPPG GKT++A+AVA+ T A F  + G E + K  GE    +R  F  
Sbjct: 193 IGIDPPRGVLLYGPPGCGKTMLAKAVAHHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRL 252

Query: 183 ADKNSPAIIFIDELDAIAPKR--EKTHGEVE-RRIVSQLLTLMDGMKKSSHVIVMAATNR 353
           A +N+PAIIFIDE+DAIA KR   +T  + E +RI+ +LL  MDG  ++ +V V+ ATNR
Sbjct: 253 AKENAPAIIFIDEIDAIATKRFDAQTGADREVQRILLELLNQMDGFDQNVNVKVIMATNR 312

Query: 354 PNSIDPALRRFGRFDREIDIGIPDATGRLEILRIHTKNMKLGDDVDL 494
            +++DPAL R GR DR+I+  +PD   +  I    T  M L ++VDL
Sbjct: 313 QDTLDPALLRPGRLDRKIEFPLPDRRQKRLIFSTITNKMNLSEEVDL 359


>SB_732| Best HMM Match : AAA (HMM E-Value=0)
          Length = 388

 Score =  145 bits (352), Expect = 3e-35
 Identities = 81/202 (40%), Positives = 127/202 (62%), Gaps = 16/202 (7%)
 Frame = +3

Query: 3   IGVKPPRGILMYGPPGTGKTLIARAVANETGAFF-FLINGPEIMSKLAGESESNLRKAFE 179
           +G+K  +GIL++GPPGTGKTL+AR +          +I+GPE+++K  GESE+N+RK F 
Sbjct: 177 MGLKHVKGILLFGPPGTGKTLMARQIGTMLNTREPKIISGPEVLNKFVGESEANIRKLFA 236

Query: 180 EA--------DKNSPAIIFIDELDAIAPKREK--THGE-VERRIVSQLLTLMDGMKKSSH 326
           EA        D ++  +I  DE DA+   R    T G  V+  +V+QLL  +DG+++ ++
Sbjct: 237 EAEEEQKRFGDNSALHLIIFDEFDAVCKSRYSYNTGGTGVQDSVVNQLLAKIDGVEQLNN 296

Query: 327 VIVMAATNRPNSIDPALRRFGRFDREIDIGIPDATGRLEILRIHTKNMK----LGDDVDL 494
           V+++  TNR + ID AL R GR + +++IG+PD  GR++IL+IHT  M+    L DDVDL
Sbjct: 297 VLLIGMTNRRDLIDDALLRPGRLEVQVEIGLPDEEGRVQILKIHTAKMRENKVLADDVDL 356

Query: 495 XQIAAESHGHVGADLASLCSEA 560
            ++A ++    GA++  L   A
Sbjct: 357 AELATQTKNFTGAEIEGLVRAA 378


>SB_9909| Best HMM Match : AAA (HMM E-Value=0)
          Length = 400

 Score =  135 bits (326), Expect = 4e-32
 Identities = 64/144 (44%), Positives = 95/144 (65%), Gaps = 3/144 (2%)
 Frame = +3

Query: 3   IGVKPPRGILMYGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEE 182
           +G++PP+G+L++GPPGTGKTL ARAVAN T A F  + G E++ K  GE    +R+ FE 
Sbjct: 113 LGIEPPKGVLLFGPPGTGKTLCARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFEM 172

Query: 183 ADKNSPAIIFIDELDAIAPKR--EKTHGEVE-RRIVSQLLTLMDGMKKSSHVIVMAATNR 353
           A      I+F DE+DAI   R  +   G+ E +R + +L+  +DG     ++ V+ ATNR
Sbjct: 173 ARTKKACIVFFDEIDAIGGARFDDGAGGDNEVQRTMLELINQLDGFDPRGNIKVLMATNR 232

Query: 354 PNSIDPALRRFGRFDREIDIGIPD 425
           P+++DPAL R GR DR+++ G+PD
Sbjct: 233 PDTLDPALMRPGRLDRKVEFGLPD 256


>SB_17703| Best HMM Match : Mito_carr (HMM E-Value=0)
          Length = 611

 Score =  124 bits (299), Expect = 8e-29
 Identities = 56/123 (45%), Positives = 83/123 (67%), Gaps = 1/123 (0%)
 Frame = +3

Query: 3   IGVKPPRGILMYGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEE 182
           +G+  P GIL+ GPPG GKTL+A+A+ANE+G  F  + GPE+++   GESE  +R+ F+ 
Sbjct: 12  LGLTHPPGILLAGPPGCGKTLLAKAIANESGINFISVKGPELLNMYVGESERAVRQVFQR 71

Query: 183 ADKNSPAIIFIDELDAIAPKRE-KTHGEVERRIVSQLLTLMDGMKKSSHVIVMAATNRPN 359
           A  ++P +IF DELD++ P+R   +      R+V+QLLT MDG++   HV +M ATN+P 
Sbjct: 72  ARNSAPCVIFFDELDSLCPRRSGSSESGSSVRVVNQLLTEMDGLQARKHVFIMGATNKPG 131

Query: 360 SID 368
             D
Sbjct: 132 IRD 134


>SB_56202| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 518

 Score =  116 bits (278), Expect = 3e-26
 Identities = 66/144 (45%), Positives = 91/144 (63%), Gaps = 7/144 (4%)
 Frame = +3

Query: 12  KPPRGILMYGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEADK 191
           +P RG+LM GPPGTGKT++A+AVA E G  FF ++   + SK  GESE  +R  FE A  
Sbjct: 281 RPWRGVLMVGPPGTGKTMLAKAVATECGTTFFNVSSSTLTSKYRGESEKLVRILFEMARF 340

Query: 192 NSPAIIFIDELDAIAPKR-EKTHGEVERRIVSQLLTLMDGMKKSS------HVIVMAATN 350
            +P+ IF+DE+D+I  +R   +  E  RR+ S+LL  MDG+  SS       V+V+AATN
Sbjct: 341 YAPSTIFVDEIDSICSRRGSDSEHEASRRVKSELLVQMDGVGGSSDDGETKQVMVLAATN 400

Query: 351 RPNSIDPALRRFGRFDREIDIGIP 422
            P  +D ALRR  R ++ I I +P
Sbjct: 401 FPWDLDEALRR--RLEKRIYIPLP 422


>SB_28977| Best HMM Match : AAA (HMM E-Value=0)
          Length = 442

 Score =  114 bits (274), Expect = 8e-26
 Identities = 63/181 (34%), Positives = 109/181 (60%), Gaps = 3/181 (1%)
 Frame = +3

Query: 48  GTGKTLIARAVANETG-AFFFLINGPEIMSKLAGESESNLRKAFEEADKNSPAIIFIDEL 224
           GTGK+ +A+AVA E   + F  ++  +++SK  GESE  +++ FE A +N P+IIFIDE+
Sbjct: 175 GTGKSYLAKAVATEANNSTFISVSSSDLVSKWLGESERLVKQLFELARENKPSIIFIDEV 234

Query: 225 DAIAPKREKTHGEVERRIVSQLLTLMDGM-KKSSHVIVMAATNRPNSIDPALRRFGRFDR 401
           D++   R +   E  RRI ++ L  M G+   +  V+V+ ATN P ++D A+RR  RF++
Sbjct: 235 DSLCGSRSENESESARRIKTEFLVQMQGVGVDNDQVLVLGATNIPWTLDSAIRR--RFEK 292

Query: 402 EIDIGIPDATGRLEILRIHTKNMK-LGDDVDLXQIAAESHGHVGADLASLCSEAALQQIR 578
            I I +P+   R ++  +H    K L    ++ Q+  ++ G+ GAD++ +  EA +  +R
Sbjct: 293 RIYIPLPEQAARSKMFELHLGGSKTLLGAQEIKQLGQKTDGYSGADISVVVREALMMPVR 352

Query: 579 E 581
           +
Sbjct: 353 K 353


>SB_5903| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 346

 Score =  109 bits (262), Expect = 2e-24
 Identities = 62/165 (37%), Positives = 92/165 (55%), Gaps = 3/165 (1%)
 Frame = +3

Query: 123 EIMSKLAGESESNLRKAFEEADKNSPAIIFIDELDAIAPKR---EKTHGEVERRIVSQLL 293
           +I     G+    +R AF  A + +PAIIFIDELDAI  KR   EK      +R + +LL
Sbjct: 162 QIQEMFIGDGAKLVRDAFALAKEKAPAIIFIDELDAIGTKRFDSEKAGDREVQRTMLELL 221

Query: 294 TLMDGMKKSSHVIVMAATNRPNSIDPALRRFGRFDREIDIGIPDATGRLEILRIHTKNMK 473
             +DG      + V+AATNR + +DPAL R GR DR+I+   PD   R  IL+IH++ M 
Sbjct: 222 NQLDGFSSHHDIKVIAATNRVDILDPALLRSGRLDRKIEFPNPDQEARARILQIHSRKMN 281

Query: 474 LGDDVDLXQIAAESHGHVGADLASLCSEAALQQIREKMDLIDLED 608
           +  DV+  +++  +    GA L ++C EA +  +R +   +  ED
Sbjct: 282 VSGDVNFDELSRCTDDFNGAMLKAVCVEAGMIALRREATEVCHED 326


>SB_3919| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 442

 Score =  107 bits (258), Expect = 7e-24
 Identities = 60/161 (37%), Positives = 99/161 (61%), Gaps = 17/161 (10%)
 Frame = +3

Query: 3   IGVKPPRGILMYGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKA--- 173
           +G+  P+G+L+YGPPGTGKTL+ARAVA+ T   F  ++G E++ K  GE    +R+    
Sbjct: 206 LGIDQPKGVLLYGPPGTGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGARMVRELFVM 265

Query: 174 -----------FEEADKNSPAIIFIDELDAIAPKREK--THGEVE-RRIVSQLLTLMDGM 311
                      F ++ +++P+IIF+DE+D+I   R +  + G+ E +R + +LL  +DG 
Sbjct: 266 ARHGENLQAMYFVDSREHAPSIIFMDEIDSIGSSRLEGGSGGDSEVQRTMLELLNQLDGF 325

Query: 312 KKSSHVIVMAATNRPNSIDPALRRFGRFDREIDIGIPDATG 434
           + + ++ V+ ATNR + +D AL R GR DR+I+   P+  G
Sbjct: 326 EATKNIKVIMATNRIDILDSALLRPGRIDRKIEFPPPNEEG 366


>SB_19460| Best HMM Match : AAA (HMM E-Value=0)
          Length = 340

 Score = 92.7 bits (220), Expect = 3e-19
 Identities = 44/109 (40%), Positives = 72/109 (66%)
 Frame = +3

Query: 3   IGVKPPRGILMYGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEE 182
           +G++ PRG+L+YGPPG  KT + RA A+ T   F  ++  ++ S   G++E  LR+ F +
Sbjct: 42  MGLRRPRGVLLYGPPGCCKTTLVRAAASSTHCTFMSLSCAQLFSSYVGDAERTLRELFLK 101

Query: 183 ADKNSPAIIFIDELDAIAPKREKTHGEVERRIVSQLLTLMDGMKKSSHV 329
           A   +PAI+F+DELD++A KR    G +E R+++ LL  MDG+  S+++
Sbjct: 102 ARATAPAILFLDELDSLAGKRGNNLG-METRLLATLLNEMDGVGVSANI 149



 Score = 74.5 bits (175), Expect = 8e-14
 Identities = 40/77 (51%), Positives = 50/77 (64%)
 Frame = +3

Query: 327 VIVMAATNRPNSIDPALRRFGRFDREIDIGIPDATGRLEILRIHTKNMKLGDDVDLXQIA 506
           +I++AATNRP +ID AL R GR D  I +  PD   RLEILR+HT+   L  DVDL  IA
Sbjct: 232 LILVAATNRPEAIDGALLRPGRIDCMIYVPPPDMKARLEILRVHTRFSPLAPDVDLSVIA 291

Query: 507 AESHGHVGADLASLCSE 557
             +  + GADL +LC E
Sbjct: 292 EGTELYSGADLENLCRE 308


>SB_35704| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 256

 Score = 80.6 bits (190), Expect = 1e-15
 Identities = 41/98 (41%), Positives = 56/98 (57%), Gaps = 1/98 (1%)
 Frame = +3

Query: 3   IGVKPPRGILMYGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEE 182
           +G K P G+L+ G PGTGKTL+A+AVA E G  FF  +G E      G   + +R  F  
Sbjct: 159 LGGKLPTGVLLIGSPGTGKTLLAKAVAGEAGVPFFFCSGSEFDEMFVGVGAARVRNLFAA 218

Query: 183 ADKNSPAIIFIDELDAIAPKR-EKTHGEVERRIVSQLL 293
           A +++P I+F+DELDAI   R    H       ++QLL
Sbjct: 219 AKEHAPCIVFVDELDAIGGSRVVHDHQPYSSMTLNQLL 256


>SB_33584| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 455

 Score = 64.9 bits (151), Expect = 7e-11
 Identities = 25/45 (55%), Positives = 37/45 (82%)
 Frame = +3

Query: 3   IGVKPPRGILMYGPPGTGKTLIARAVANETGAFFFLINGPEIMSK 137
           +G+KPP+G+++YG PGTGKTL+A+AVAN+T A F  + G E++ K
Sbjct: 409 MGIKPPKGVILYGQPGTGKTLLAKAVANQTSATFLRVVGSELIQK 453


>SB_31892| Best HMM Match : AAA (HMM E-Value=6.2e-25)
          Length = 420

 Score = 62.9 bits (146), Expect = 3e-10
 Identities = 48/160 (30%), Positives = 79/160 (49%), Gaps = 7/160 (4%)
 Frame = +3

Query: 6   GVKPPRGILMYGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEA 185
           G+   RG L+YGPPG GK+   +A+A E      ++N  +        ++  L      A
Sbjct: 218 GIPYRRGYLLYGPPGCGKSSFIQALAGELDYSICVMNLSD-----RSLTDDRLNHLMSVA 272

Query: 186 DKNSPAIIFIDELDAIAPKREKTH------GEVERRIV-SQLLTLMDGMKKSSHVIVMAA 344
            + S  II ++++DA   KR++T+      G  + R+  S LL  +DG+  S   +V   
Sbjct: 273 PQQS--IILLEDIDAAFVKRDETNAANKGGGMYQNRVTFSGLLNTLDGVASSEERVVFMT 330

Query: 345 TNRPNSIDPALRRFGRFDREIDIGIPDATGRLEILRIHTK 464
           TN    +DPAL R GR D + +I   D   R +++R+  +
Sbjct: 331 TNHLKRLDPALIRPGRVDFKQEI---DWASRSQLVRMFAR 367


>SB_33907| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 56

 Score = 57.6 bits (133), Expect = 1e-08
 Identities = 23/44 (52%), Positives = 34/44 (77%)
 Frame = +3

Query: 3   IGVKPPRGILMYGPPGTGKTLIARAVANETGAFFFLINGPEIMS 134
           +G+  P GIL+ GPPG GKTL+A+A+ANE+G  F  + GPE+++
Sbjct: 12  LGLTHPPGILLAGPPGCGKTLLAKAIANESGINFISVKGPELLN 55


>SB_30385| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 131

 Score = 57.2 bits (132), Expect = 1e-08
 Identities = 25/61 (40%), Positives = 35/61 (57%)
 Frame = +3

Query: 3   IGVKPPRGILMYGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEE 182
           +G+  P+GIL+ G PG GKTL+      + G      NG ++    AGESE NLR+ F +
Sbjct: 70  LGINGPKGILLVGAPGVGKTLLVHKATVDCGIKLVSTNGTDVFGPHAGESEENLRRVFNK 129

Query: 183 A 185
           A
Sbjct: 130 A 130


>SB_46732| Best HMM Match : AAA (HMM E-Value=0.044)
          Length = 430

 Score = 56.8 bits (131), Expect = 2e-08
 Identities = 26/78 (33%), Positives = 48/78 (61%), Gaps = 1/78 (1%)
 Frame = +3

Query: 21  RGILMYGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEADKNSP 200
           R +L YGPPGTGKT+ A+++A  +G  + ++ G +++  +  E  + + K F+ A+ +  
Sbjct: 330 RNLLFYGPPGTGKTMFAKSLARHSGMDYAVMTGGDVV-PMGKEGVTAMHKVFDWAETSRR 388

Query: 201 AI-IFIDELDAIAPKREK 251
            + +F+DE DA   KR +
Sbjct: 389 GVLLFVDEADAFLRKRSQ 406


>SB_6656| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 461

 Score = 53.2 bits (122), Expect = 2e-07
 Identities = 31/118 (26%), Positives = 55/118 (46%), Gaps = 3/118 (2%)
 Frame = +3

Query: 21  RGILMYGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGES--ESNLRKAFEEADKN 194
           + +L+ GP G GK ++   +  ETGA  F +    I  K  G++     L   F+ A + 
Sbjct: 208 KSVLITGPRGVGKKMLVHCICTETGANLFDLTAANIAGKYPGKAGLAMLLHMVFKVARQL 267

Query: 195 SPAIIFIDELD-AIAPKREKTHGEVERRIVSQLLTLMDGMKKSSHVIVMAATNRPNSI 365
            P+++FI + +     K  KT     +R+   L  L+  +K    VI++  + +P  I
Sbjct: 268 QPSVVFIGDAERTFVKKVPKTDKSDPKRLKKDLPKLLKTLKPEDRVIIIGTSRQPFDI 325


>SB_32582| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 1151

 Score = 40.3 bits (90), Expect = 0.002
 Identities = 23/99 (23%), Positives = 47/99 (47%)
 Frame = +3

Query: 195 SPAIIFIDELDAIAPKREKTHGEVERRIVSQLLTLMDGMKKSSHVIVMAATNRPNSIDPA 374
           +PA + ID ++ +  K  +T  E +   +S + +L+D     S  + +  T+R N  + +
Sbjct: 195 TPAFLLIDNVEQLLGKETETEQETQNEFISLIKSLLDSPPAKSGSLKIILTSRANVEEQS 254

Query: 375 LRRFGRFDREIDIGIPDATGRLEILRIHTKNMKLGDDVD 491
           LRR G  ++ ++    + +    I R      K  D++D
Sbjct: 255 LRRSGFSEKVVEKWDTETSKSFMIERSRYPIQKAEDEMD 293


>SB_25516| Best HMM Match : AAA_2 (HMM E-Value=0)
          Length = 609

 Score = 39.1 bits (87), Expect = 0.004
 Identities = 26/75 (34%), Positives = 41/75 (54%), Gaps = 6/75 (8%)
 Frame = +3

Query: 27  ILMYGPPGTGKTLIARAVANETGAFFFLINGPEI-MSKLAGES-ESNLRKAFEEA----D 188
           IL+ GP G+GKTL+A+ +A      F + +   +  +   GE  ES + K  +EA    +
Sbjct: 273 ILLLGPTGSGKTLLAQTIARCLDVPFAICDCTALTQAGYVGEDIESVIAKLLQEAGGNVE 332

Query: 189 KNSPAIIFIDELDAI 233
           K    I+F+DE+D I
Sbjct: 333 KAQQGIVFLDEVDKI 347


>SB_3478| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 62

 Score = 39.1 bits (87), Expect = 0.004
 Identities = 18/50 (36%), Positives = 27/50 (54%)
 Frame = +3

Query: 390 RFDREIDIGIPDATGRLEILRIHTKNMKLGDDVDLXQIAAESHGHVGADL 539
           R DR+I+  +PD   +  I  IHT+ M L +DV+L +         GAD+
Sbjct: 2   RIDRKIEFPMPDEKTKRRIFNIHTQRMTLAEDVNLEEFIMAKDDLSGADI 51


>SB_11032| Best HMM Match : AAA (HMM E-Value=3.5)
          Length = 111

 Score = 38.3 bits (85), Expect = 0.007
 Identities = 19/50 (38%), Positives = 28/50 (56%)
 Frame = +3

Query: 144 GESESNLRKAFEEADKNSPAIIFIDELDAIAPKREKTHGEVERRIVSQLL 293
           GE E  +R  F  A    PA+IF+DE+D++  +R     E  RRI ++ L
Sbjct: 2   GEGEKMVRAMFAVARCYLPAVIFMDEIDSLLTQRTDGEHEASRRIKTEFL 51


>SB_21493| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 306

 Score = 33.5 bits (73), Expect = 0.19
 Identities = 20/48 (41%), Positives = 26/48 (54%), Gaps = 2/48 (4%)
 Frame = +3

Query: 21  RGILMYGPPGTGKTLIARAVANETG--AFFFLINGPEIMSKLAGESES 158
           R +L+ G PGTGKT IA  +A   G    F  I G EI S    ++E+
Sbjct: 170 RAVLIAGQPGTGKTAIAMGMAQSLGPDTPFTSIAGSEIFSLEMSKTEA 217


>SB_26897| Best HMM Match : AAA (HMM E-Value=4.2e-12)
          Length = 230

 Score = 32.7 bits (71), Expect = 0.33
 Identities = 43/191 (22%), Positives = 80/191 (41%), Gaps = 15/191 (7%)
 Frame = +3

Query: 27  ILMYGPPGTGKTLIARAVANET------GAFFFLINGPEI--MSKLAGE--SESNLRKAF 176
           +L YGPPGTGKT    AVA +       G+    +N  +   +  + G+  S ++ R  F
Sbjct: 13  LLFYGPPGTGKTSTILAVAKQLYPDKQFGSMVLELNASDDRGIGIVRGDILSFASTRTIF 72

Query: 177 EEADKNSPAIIFIDELDAIAPKREKTHGEVERRIV--SQLLTLMDGMKKSSHVIVMAATN 350
           +   K    ++ +DE DA+    +     V  +    ++   + + + K    +    T 
Sbjct: 73  KSGFK----LVILDEADAMTQDAQNALRRVMEKFTENTRFCLICNYLTKIIPALQSRCTR 128

Query: 351 ---RPNSIDPALRRFGRFDREIDIGIPDATGRLEILRIHTKNMKLGDDVDLXQIAAESHG 521
               P S+D  L R         + + D  GR  +LR+   +M+    +++ Q  + ++ 
Sbjct: 129 FRFGPLSVDQMLPRLEHVIESERVNVTD-DGRKSLLRLAQGDMR--KVLNILQSTSMAYS 185

Query: 522 HVGADLASLCS 554
            V  D   LC+
Sbjct: 186 VVNEDHVYLCT 196


>SB_59437| Best HMM Match : AAA (HMM E-Value=7.4e-08)
          Length = 568

 Score = 32.7 bits (71), Expect = 0.33
 Identities = 15/39 (38%), Positives = 20/39 (51%)
 Frame = +3

Query: 21  RGILMYGPPGTGKTLIARAVANETGAFFFLINGPEIMSK 137
           +  L+ GPPG GKT  A  V  E G  +  +N  +  SK
Sbjct: 272 KAALLSGPPGVGKTTTATLVCQELGYSYVEMNASDARSK 310


>SB_54124| Best HMM Match : AAA (HMM E-Value=7.8e-08)
          Length = 251

 Score = 32.3 bits (70), Expect = 0.43
 Identities = 23/85 (27%), Positives = 43/85 (50%), Gaps = 7/85 (8%)
 Frame = +3

Query: 27  ILMYGPPGTGKTLIARAVA---NETGAF----FFLINGPEIMSKLAGESESNLRKAFEEA 185
           ++  G PGTGKT +AR +A   +E G         +    ++ +  GE+ +  + A + A
Sbjct: 16  VMFVGNPGTGKTTMARMMAGILHEAGVIKRNKVIEVQRTALVGRYIGETGTKTKGAIDRA 75

Query: 186 DKNSPAIIFIDELDAIAPKREKTHG 260
            K S  ++ IDE   ++ + +K +G
Sbjct: 76  -KGS--VLLIDEAYRLSSESDKNYG 97


>SB_43853| Best HMM Match : AAA_5 (HMM E-Value=0)
          Length = 2065

 Score = 32.3 bits (70), Expect = 0.43
 Identities = 15/33 (45%), Positives = 19/33 (57%)
 Frame = +3

Query: 18   PRGILMYGPPGTGKTLIARAVANETGAFFFLIN 116
            PR IL+ G PG GKT +  A+A  +G     IN
Sbjct: 1617 PRPILLEGSPGVGKTSLVSAIAKASGHELVRIN 1649



 Score = 28.7 bits (61), Expect = 5.3
 Identities = 17/49 (34%), Positives = 24/49 (48%)
 Frame = +3

Query: 3   IGVKPPRGILMYGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGE 149
           + V    G+L+ GP G+GKT +   VA+  G        PEIM    G+
Sbjct: 113 LAVAAGSGVLLEGPVGSGKTCLVEHVASMCGR----STPPEIMKVQLGD 157


>SB_380| Best HMM Match : AAA (HMM E-Value=0.14)
          Length = 508

 Score = 31.5 bits (68), Expect = 0.76
 Identities = 13/29 (44%), Positives = 18/29 (62%)
 Frame = +3

Query: 15  PPRGILMYGPPGTGKTLIARAVANETGAF 101
           PP  +++ GP G GKTL  R +A + G F
Sbjct: 118 PPIRLMIVGPKGAGKTLHGRELARKLGLF 146


>SB_35973| Best HMM Match : zf-CCHC (HMM E-Value=0.0026)
          Length = 779

 Score = 31.1 bits (67), Expect = 1.00
 Identities = 9/16 (56%), Positives = 14/16 (87%)
 Frame = +3

Query: 3   IGVKPPRGILMYGPPG 50
           +G+ PP+G L++GPPG
Sbjct: 164 VGIAPPKGCLLFGPPG 179


>SB_379| Best HMM Match : ADK (HMM E-Value=3.2e-05)
          Length = 991

 Score = 31.1 bits (67), Expect = 1.00
 Identities = 12/29 (41%), Positives = 19/29 (65%)
 Frame = +3

Query: 12  KPPRGILMYGPPGTGKTLIARAVANETGA 98
           +PP  + + GPP +GKTL+A+ +A    A
Sbjct: 317 RPPCKVCVLGPPHSGKTLVAKQLAERYNA 345


>SB_58910| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 177

 Score = 30.3 bits (65), Expect = 1.7
 Identities = 15/40 (37%), Positives = 22/40 (55%)
 Frame = +3

Query: 489 DLXQIAAESHGHVGADLASLCSEAALQQIREKMDLIDLED 608
           D   +   S G  GADL ++C+EA +  IR + D +  ED
Sbjct: 115 DYEAVVKLSDGFNGADLRNVCTEAGMFAIRGERDYVIEED 154


>SB_34154| Best HMM Match : UvrD-helicase (HMM E-Value=0.064)
          Length = 1064

 Score = 30.3 bits (65), Expect = 1.7
 Identities = 11/20 (55%), Positives = 14/20 (70%)
 Frame = +3

Query: 6   GVKPPRGILMYGPPGTGKTL 65
           G   P   L++GPPGTGKT+
Sbjct: 547 GTSRPHPYLIFGPPGTGKTI 566


>SB_58663| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 1008

 Score = 29.9 bits (64), Expect = 2.3
 Identities = 27/128 (21%), Positives = 52/128 (40%)
 Frame = +3

Query: 300 MDGMKKSSHVIVMAATNRPNSIDPALRRFGRFDREIDIGIPDATGRLEILRIHTKNMKLG 479
           ++GM K +  +     ++  S+D   + +GR  RE+           ++L+I  +  K+ 
Sbjct: 105 IEGMTKINEELKAKLCSQKQSLDEVTQNYGRLQREM------CATEDKLLQITRERNKIE 158

Query: 480 DDVDLXQIAAESHGHVGADLASLCSEAALQQIREKMDLIDLEDDQIDARGSQFSGCLHG* 659
           + +   Q   E      A+          + ++E  DL++ E D   A+  +      G 
Sbjct: 159 EQLLAEQQGGEERAARQAEEMDHIKADHAKAMQEATDLLNRERDAFKAQSLELERACQG- 217

Query: 660 LPVRNDEI 683
           L V  DEI
Sbjct: 218 LKVAGDEI 225


>SB_8371| Best HMM Match : Vicilin_N (HMM E-Value=0.11)
          Length = 323

 Score = 29.9 bits (64), Expect = 2.3
 Identities = 18/55 (32%), Positives = 27/55 (49%), Gaps = 1/55 (1%)
 Frame = -1

Query: 675 HCVPEVIHGDSQRIENLWRQSDRPRGQ*DPSSHESAA-RLPPSTETRDQRPRDRE 514
           H +   +    QRIE L  + D  RG+ + +S E    RLP STE      +++E
Sbjct: 218 HQLSHKVQRQQQRIEELTCELDLARGELEKNSMEEVTDRLPQSTEIHQLLDKNQE 272


>SB_57268| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 912

 Score = 29.5 bits (63), Expect = 3.0
 Identities = 18/54 (33%), Positives = 30/54 (55%), Gaps = 5/54 (9%)
 Frame = +3

Query: 342 ATNRPNSIDPALRRFGRFDREIDIGIP----DATGRLEIL-RIHTKNMKLGDDV 488
           +T R N +DP +RR  R  +  +I IP      T + ++L +IHTK   +G+ +
Sbjct: 348 STKRKNPMDPVIRRRKRRGQGGEISIPCEPDKKTLKAQLLQKIHTKEYSIGERI 401


>SB_51808| Best HMM Match : OmpA (HMM E-Value=0.72)
          Length = 516

 Score = 29.5 bits (63), Expect = 3.0
 Identities = 18/54 (33%), Positives = 30/54 (55%), Gaps = 5/54 (9%)
 Frame = +3

Query: 342 ATNRPNSIDPALRRFGRFDREIDIGIP----DATGRLEIL-RIHTKNMKLGDDV 488
           +T R N +DP +RR  R  +  +I IP      T + ++L +IHTK   +G+ +
Sbjct: 355 STKRKNPMDPVIRRRKRRGQGGEISIPCEPDKKTLKAQLLQKIHTKEYSIGERI 408


>SB_46519| Best HMM Match : DUF720 (HMM E-Value=0.49)
          Length = 1205

 Score = 29.5 bits (63), Expect = 3.0
 Identities = 18/54 (33%), Positives = 30/54 (55%), Gaps = 5/54 (9%)
 Frame = +3

Query: 342 ATNRPNSIDPALRRFGRFDREIDIGIP----DATGRLEIL-RIHTKNMKLGDDV 488
           +T R N +DP +RR  R  +  +I IP      T + ++L +IHTK   +G+ +
Sbjct: 273 STKRKNPMDPVIRRRKRRGQGGEISIPCEPDKKTLKAQLLQKIHTKEYSIGERI 326


>SB_44158| Best HMM Match : OmpA (HMM E-Value=0.72)
          Length = 406

 Score = 29.5 bits (63), Expect = 3.0
 Identities = 18/54 (33%), Positives = 30/54 (55%), Gaps = 5/54 (9%)
 Frame = +3

Query: 342 ATNRPNSIDPALRRFGRFDREIDIGIP----DATGRLEIL-RIHTKNMKLGDDV 488
           +T R N +DP +RR  R  +  +I IP      T + ++L +IHTK   +G+ +
Sbjct: 349 STKRKNPMDPVIRRRKRRGQGGEISIPCEPDKKTLKAQLLQKIHTKEYSIGERI 402


>SB_42682| Best HMM Match : OmpA (HMM E-Value=0.72)
          Length = 296

 Score = 29.5 bits (63), Expect = 3.0
 Identities = 18/54 (33%), Positives = 30/54 (55%), Gaps = 5/54 (9%)
 Frame = +3

Query: 342 ATNRPNSIDPALRRFGRFDREIDIGIP----DATGRLEIL-RIHTKNMKLGDDV 488
           +T R N +DP +RR  R  +  +I IP      T + ++L +IHTK   +G+ +
Sbjct: 65  STKRKNPMDPVIRRRKRRGQGGEISIPCEPDKKTLKAQLLQKIHTKEYSIGERI 118


>SB_25694| Best HMM Match : RVT_1 (HMM E-Value=1.9e-22)
          Length = 1797

 Score = 29.5 bits (63), Expect = 3.0
 Identities = 18/54 (33%), Positives = 30/54 (55%), Gaps = 5/54 (9%)
 Frame = +3

Query: 342 ATNRPNSIDPALRRFGRFDREIDIGIP----DATGRLEIL-RIHTKNMKLGDDV 488
           +T R N +DP +RR  R  +  +I IP      T + ++L +IHTK   +G+ +
Sbjct: 283 STKRKNPMDPVIRRRERRGQGGEISIPCEPDKKTLKAQLLQKIHTKEYSIGERI 336


>SB_10656| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 1931

 Score = 29.5 bits (63), Expect = 3.0
 Identities = 20/57 (35%), Positives = 29/57 (50%)
 Frame = +3

Query: 51   TGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEADKNSPAIIFIDE 221
            +GKTLIARA  NE  A        E+M K A E +    KA + A ++    + ++E
Sbjct: 1655 SGKTLIARAGENEGNA--------EVMGKTADELKEKATKAAQNATESKTKALKLEE 1703


>SB_4259| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 540

 Score = 29.5 bits (63), Expect = 3.0
 Identities = 18/54 (33%), Positives = 30/54 (55%), Gaps = 5/54 (9%)
 Frame = +3

Query: 342 ATNRPNSIDPALRRFGRFDREIDIGIP----DATGRLEIL-RIHTKNMKLGDDV 488
           +T R N +DP +RR  R  +  +I IP      T + ++L +IHTK   +G+ +
Sbjct: 413 STKRKNPMDPVIRRRKRRGQGGEISIPCEPDKKTLKAQLLQKIHTKEYSIGERI 466


>SB_42068| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 3367

 Score = 29.5 bits (63), Expect = 3.0
 Identities = 12/30 (40%), Positives = 17/30 (56%)
 Frame = +3

Query: 36   YGPPGTGKTLIARAVANETGAFFFLINGPE 125
            +GP GTGKT   +A+  + G F  + N  E
Sbjct: 1854 FGPAGTGKTESVKALGQQLGRFVLVFNCDE 1883


>SB_36695| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 412

 Score = 29.5 bits (63), Expect = 3.0
 Identities = 18/54 (33%), Positives = 30/54 (55%), Gaps = 5/54 (9%)
 Frame = +3

Query: 342 ATNRPNSIDPALRRFGRFDREIDIGIP----DATGRLEIL-RIHTKNMKLGDDV 488
           +T R N +DP +RR  R  +  +I IP      T + ++L +IHTK   +G+ +
Sbjct: 355 STKRKNPMDPVIRRRKRRGQGGEISIPCEPDKKTLKAQLLQKIHTKEYSIGERI 408


>SB_19755| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 621

 Score = 29.5 bits (63), Expect = 3.0
 Identities = 18/54 (33%), Positives = 30/54 (55%), Gaps = 5/54 (9%)
 Frame = +3

Query: 342 ATNRPNSIDPALRRFGRFDREIDIGIP----DATGRLEIL-RIHTKNMKLGDDV 488
           +T R N +DP +RR  R  +  +I IP      T + ++L +IHTK   +G+ +
Sbjct: 283 STKRKNPMDPVIRRRKRRGQGGEISIPCEPDKKTLKAQLLQKIHTKEYSIGERI 336


>SB_16760| Best HMM Match : OmpA (HMM E-Value=0.72)
          Length = 933

 Score = 29.5 bits (63), Expect = 3.0
 Identities = 18/54 (33%), Positives = 30/54 (55%), Gaps = 5/54 (9%)
 Frame = +3

Query: 342 ATNRPNSIDPALRRFGRFDREIDIGIP----DATGRLEIL-RIHTKNMKLGDDV 488
           +T R N +DP +RR  R  +  +I IP      T + ++L +IHTK   +G+ +
Sbjct: 355 STKRKNPMDPVIRRRKRRGQGGEISIPCEPDKKTLKAQLLQKIHTKEYSIGERI 408


>SB_15796| Best HMM Match : RVT_1 (HMM E-Value=0.00082)
          Length = 1304

 Score = 29.5 bits (63), Expect = 3.0
 Identities = 18/54 (33%), Positives = 30/54 (55%), Gaps = 5/54 (9%)
 Frame = +3

Query: 342 ATNRPNSIDPALRRFGRFDREIDIGIP----DATGRLEIL-RIHTKNMKLGDDV 488
           +T R N +DP +RR  R  +  +I IP      T + ++L +IHTK   +G+ +
Sbjct: 702 STKRKNPMDPVIRRRERRGQGGEISIPCEPDKKTLKAQLLQKIHTKEYSIGERI 755


>SB_10418| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 477

 Score = 29.5 bits (63), Expect = 3.0
 Identities = 11/22 (50%), Positives = 14/22 (63%)
 Frame = +3

Query: 30  LMYGPPGTGKTLIARAVANETG 95
           L+ GPPG GKT +A  +A   G
Sbjct: 384 LLCGPPGLGKTTLAHVIAQHAG 405


>SB_23422| Best HMM Match : Propeptide_C1 (HMM E-Value=7.2)
          Length = 628

 Score = 29.1 bits (62), Expect = 4.0
 Identities = 11/20 (55%), Positives = 14/20 (70%)
 Frame = +3

Query: 6   GVKPPRGILMYGPPGTGKTL 65
           G   P   L++GPPGTGKT+
Sbjct: 587 GQSRPTPYLLFGPPGTGKTV 606


>SB_27721| Best HMM Match : CRPA (HMM E-Value=2.4)
          Length = 161

 Score = 28.3 bits (60), Expect = 7.0
 Identities = 12/25 (48%), Positives = 19/25 (76%)
 Frame = +3

Query: 528 GADLASLCSEAALQQIREKMDLIDL 602
           GADLA+L  EA++  +RE+++L  L
Sbjct: 2   GADLAALVREASMAALRERINLTSL 26


>SB_16306| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 958

 Score = 28.3 bits (60), Expect = 7.0
 Identities = 16/46 (34%), Positives = 23/46 (50%), Gaps = 2/46 (4%)
 Frame = +3

Query: 9   VKPPRGILMYGPPGTGKTLIARAVANETG--AFFFLINGPEIMSKL 140
           V+P   + + GP G+GKT +   +A      A   LING  +  KL
Sbjct: 32  VRPGEMLALMGPSGSGKTTLLNVLAGRMAKDAGDVLINGKHMNKKL 77


>SB_13937| Best HMM Match : zf-CCCH (HMM E-Value=0.0017)
          Length = 1495

 Score = 28.3 bits (60), Expect = 7.0
 Identities = 11/28 (39%), Positives = 21/28 (75%), Gaps = 1/28 (3%)
 Frame = +3

Query: 9    VKPPR-GILMYGPPGTGKTLIARAVANE 89
            ++P R  I++ GPPG+GKT +A+ + ++
Sbjct: 1245 IRPDRIVIILRGPPGSGKTHVAKLIKDK 1272


>SB_3294| Best HMM Match : DUF755 (HMM E-Value=0.22)
          Length = 884

 Score = 28.3 bits (60), Expect = 7.0
 Identities = 16/54 (29%), Positives = 26/54 (48%)
 Frame = +3

Query: 474 LGDDVDLXQIAAESHGHVGADLASLCSEAALQQIREKMDLIDLEDDQIDARGSQ 635
           L  D +L    AE H HVG +  ++C  A     ++   ++DL      A+GS+
Sbjct: 678 LPSDENLASTGAE-HIHVGREQPAICGTAPTNGAQQSQGILDLNHVIKKAKGSE 730


>SB_38518| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 1399

 Score = 27.9 bits (59), Expect = 9.3
 Identities = 16/65 (24%), Positives = 28/65 (43%)
 Frame = +3

Query: 216  DELDAIAPKREKTHGEVERRIVSQLLTLMDGMKKSSHVIVMAATNRPNSIDPALRRFGRF 395
            D+++  +PK  K  G  +R  +S+        +         ++ R  S D   +  G+F
Sbjct: 1215 DDVEVTSPKTAKNTGTSQRPSLSRNSASSHSREDRGKESSRTSSTRRTSSDKYAKTTGKF 1274

Query: 396  DREID 410
             REID
Sbjct: 1275 SREID 1279


>SB_26376| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 1018

 Score = 27.9 bits (59), Expect = 9.3
 Identities = 22/66 (33%), Positives = 35/66 (53%), Gaps = 1/66 (1%)
 Frame = -2

Query: 692 DXDDFVIAYRKL-SMETARELRTSGVNLIVLEVNEIHLLTNLLQGCLRAQRREISAHVTV 516
           D   F+   R+L + ETA E  TS ++ ++ EVN++  L N +   L+ Q  E+S  +T 
Sbjct: 145 DMWQFININRRLGATETAIEKLTSLLDNMMAEVNDVKELANGIDD-LKKQISEVSLELTA 203

Query: 515 RLCCDL 498
              C L
Sbjct: 204 CTKCIL 209


>SB_10624| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 2193

 Score = 27.9 bits (59), Expect = 9.3
 Identities = 15/33 (45%), Positives = 20/33 (60%), Gaps = 1/33 (3%)
 Frame = +3

Query: 396 DREID-IGIPDATGRLEILRIHTKNMKLGDDVD 491
           +RE+D  G  DA  R E++ + TKN  L  DVD
Sbjct: 111 NRELDGKGTSDADLRKEVIELRTKNKTLERDVD 143


>SB_8559| Best HMM Match : Dpy-30 (HMM E-Value=3.7e-11)
          Length = 806

 Score = 27.9 bits (59), Expect = 9.3
 Identities = 19/94 (20%), Positives = 43/94 (45%), Gaps = 2/94 (2%)
 Frame = +3

Query: 6   GVKPPRGILMYGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEA 185
           G+ P R  ++ GPP +GKTL+ + +          I    ++ +   + + +  +A ++ 
Sbjct: 355 GLLPVRACIL-GPPASGKTLVVKQLCTHYKLHHIRIQ--SVIDEAIEKLQQSAARADQDN 411

Query: 186 DKNSPAIIFIDE--LDAIAPKREKTHGEVERRIV 281
           D         D+  L+A+   +E+ +G  E + +
Sbjct: 412 DDEDDMKAQEDQELLEALLESKEQNNGRYEDQYI 445


  Database: nematostella
    Posted date:  Oct 22, 2007  1:22 PM
  Number of letters in database: 16,821,457
  Number of sequences in database:  59,808
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,997,476
Number of Sequences: 59808
Number of extensions: 426076
Number of successful extensions: 1494
Number of sequences better than 10.0: 64
Number of HSP's better than 10.0 without gapping: 1309
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1464
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 2034222073
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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