Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brP-0633
(750 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_14682| Best HMM Match : No HMM Matches (HMM E-Value=.) 239 2e-63
SB_37200| Best HMM Match : No HMM Matches (HMM E-Value=.) 202 3e-52
SB_48561| Best HMM Match : AAA (HMM E-Value=0) 177 1e-44
SB_45627| Best HMM Match : AAA (HMM E-Value=0) 173 1e-43
SB_7424| Best HMM Match : AAA (HMM E-Value=0) 167 6e-42
SB_55690| Best HMM Match : AAA (HMM E-Value=0) 165 3e-41
SB_49367| Best HMM Match : AAA (HMM E-Value=0) 165 3e-41
SB_40956| Best HMM Match : No HMM Matches (HMM E-Value=.) 156 2e-38
SB_3115| Best HMM Match : AAA (HMM E-Value=0) 155 3e-38
SB_33442| Best HMM Match : AAA (HMM E-Value=0) 151 6e-37
SB_732| Best HMM Match : AAA (HMM E-Value=0) 145 3e-35
SB_9909| Best HMM Match : AAA (HMM E-Value=0) 135 4e-32
SB_17703| Best HMM Match : Mito_carr (HMM E-Value=0) 124 8e-29
SB_56202| Best HMM Match : No HMM Matches (HMM E-Value=.) 116 3e-26
SB_28977| Best HMM Match : AAA (HMM E-Value=0) 114 8e-26
SB_5903| Best HMM Match : No HMM Matches (HMM E-Value=.) 109 2e-24
SB_3919| Best HMM Match : No HMM Matches (HMM E-Value=.) 107 7e-24
SB_19460| Best HMM Match : AAA (HMM E-Value=0) 93 3e-19
SB_35704| Best HMM Match : No HMM Matches (HMM E-Value=.) 81 1e-15
SB_33584| Best HMM Match : No HMM Matches (HMM E-Value=.) 65 7e-11
SB_31892| Best HMM Match : AAA (HMM E-Value=6.2e-25) 63 3e-10
SB_33907| Best HMM Match : No HMM Matches (HMM E-Value=.) 58 1e-08
SB_30385| Best HMM Match : No HMM Matches (HMM E-Value=.) 57 1e-08
SB_46732| Best HMM Match : AAA (HMM E-Value=0.044) 57 2e-08
SB_6656| Best HMM Match : No HMM Matches (HMM E-Value=.) 53 2e-07
SB_32582| Best HMM Match : No HMM Matches (HMM E-Value=.) 40 0.002
SB_25516| Best HMM Match : AAA_2 (HMM E-Value=0) 39 0.004
SB_3478| Best HMM Match : No HMM Matches (HMM E-Value=.) 39 0.004
SB_11032| Best HMM Match : AAA (HMM E-Value=3.5) 38 0.007
SB_21493| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.19
SB_26897| Best HMM Match : AAA (HMM E-Value=4.2e-12) 33 0.33
SB_59437| Best HMM Match : AAA (HMM E-Value=7.4e-08) 33 0.33
SB_54124| Best HMM Match : AAA (HMM E-Value=7.8e-08) 32 0.43
SB_43853| Best HMM Match : AAA_5 (HMM E-Value=0) 32 0.43
SB_380| Best HMM Match : AAA (HMM E-Value=0.14) 31 0.76
SB_35973| Best HMM Match : zf-CCHC (HMM E-Value=0.0026) 31 1.00
SB_379| Best HMM Match : ADK (HMM E-Value=3.2e-05) 31 1.00
SB_58910| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.7
SB_34154| Best HMM Match : UvrD-helicase (HMM E-Value=0.064) 30 1.7
SB_58663| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.3
SB_8371| Best HMM Match : Vicilin_N (HMM E-Value=0.11) 30 2.3
SB_57268| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.0
SB_51808| Best HMM Match : OmpA (HMM E-Value=0.72) 29 3.0
SB_46519| Best HMM Match : DUF720 (HMM E-Value=0.49) 29 3.0
SB_44158| Best HMM Match : OmpA (HMM E-Value=0.72) 29 3.0
SB_42682| Best HMM Match : OmpA (HMM E-Value=0.72) 29 3.0
SB_25694| Best HMM Match : RVT_1 (HMM E-Value=1.9e-22) 29 3.0
SB_10656| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.0
SB_4259| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.0
SB_42068| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.0
SB_36695| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.0
SB_19755| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.0
SB_16760| Best HMM Match : OmpA (HMM E-Value=0.72) 29 3.0
SB_15796| Best HMM Match : RVT_1 (HMM E-Value=0.00082) 29 3.0
SB_10418| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.0
SB_23422| Best HMM Match : Propeptide_C1 (HMM E-Value=7.2) 29 4.0
SB_27721| Best HMM Match : CRPA (HMM E-Value=2.4) 28 7.0
SB_16306| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.0
SB_13937| Best HMM Match : zf-CCCH (HMM E-Value=0.0017) 28 7.0
SB_3294| Best HMM Match : DUF755 (HMM E-Value=0.22) 28 7.0
SB_38518| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.3
SB_26376| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.3
SB_10624| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.3
SB_8559| Best HMM Match : Dpy-30 (HMM E-Value=3.7e-11) 28 9.3
>SB_14682| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 802
Score = 239 bits (584), Expect = 2e-63
Identities = 128/255 (50%), Positives = 168/255 (65%), Gaps = 7/255 (2%)
Frame = +3
Query: 6 GVKPPRGILMYGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEA 185
GV PPRGIL+YGP GTGKT+IARAVANETG FF INGPE++S+ GE+E+ LR+ F EA
Sbjct: 286 GVPPPRGILLYGPSGTGKTMIARAVANETGVHFFCINGPEVLSRYYGETEARLREIFTEA 345
Query: 186 DKNSPAIIFIDELDAIAPKREKTHGEVERRIVSQLLTLMDGMKKSS---HVIVMAATNRP 356
SP+I+FIDELDA+ P+R+K E ERR+V+ LLTLMDGM S +V+V+AATNRP
Sbjct: 346 QNKSPSIVFIDELDALCPRRDKVQNEFERRVVATLLTLMDGMHMKSTDTYVMVLAATNRP 405
Query: 357 NSIDPALRRFGRFDREIDIGIPDATGRLEILRIHTKNMKLG-DDVDLXQIAAESHGHVGA 533
+++DPALRR GRFDREI+IGIP T R +IL KN+ D D+ +A +HG+VGA
Sbjct: 406 DALDPALRRPGRFDREIEIGIPSVTDRRDILVTLLKNVPHSLHDEDISSLAESAHGYVGA 465
Query: 534 DLASLCSEAALQQIREKMDLIDLEDDQ-IDARGSQFS-GCLHG*LPVRND-EIVXVGVT* 704
DLA+ C EA+L + + D Q ++ R ++ L +R V
Sbjct: 466 DLAAACKEASLYAFKRSLHNHDNGSSQSLEQRDARIKRELLVSSEDMRAAFRCVRPSAMR 525
Query: 705 DSGGEVPNVTWTDIG 749
+ EVP V W+D+G
Sbjct: 526 EVALEVPKVHWSDVG 540
Score = 186 bits (454), Expect = 1e-47
Identities = 95/202 (47%), Positives = 131/202 (64%), Gaps = 1/202 (0%)
Frame = +3
Query: 3 IGVKPPRGILMYGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEE 182
+G++PPRGILMYGPPG KTLIARA+A E+G F I GPE+ SK GESE +R+ F +
Sbjct: 566 LGIRPPRGILMYGPPGCSKTLIARALATESGLNFIAIKGPELFSKWVGESEKAVREVFLK 625
Query: 183 ADKNSPAIIFIDELDAIAPKREKTHG-EVERRIVSQLLTLMDGMKKSSHVIVMAATNRPN 359
A +P+I+F DELDAIA +R T G +V R+++QLLT +DG++ VI +AATNRP+
Sbjct: 626 ARATAPSIVFFDELDAIAGQRNSTGGSDVNDRVLTQLLTELDGVETLKDVIFIAATNRPD 685
Query: 360 SIDPALRRFGRFDREIDIGIPDATGRLEILRIHTKNMKLGDDVDLXQIAAESHGHVGADL 539
ID AL R GR DR I + +P R IL IH +DL + + G+ GA++
Sbjct: 686 MIDKALMRPGRVDRLIYVPLPCWDTRRHILEIHLARTPCEGSLDLEDLVERTEGYSGAEI 745
Query: 540 ASLCSEAALQQIREKMDLIDLE 605
A++C EAAL ++E + +E
Sbjct: 746 AAVCREAALAALQENIQAESVE 767
>SB_37200| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 908
Score = 202 bits (492), Expect = 3e-52
Identities = 99/198 (50%), Positives = 131/198 (66%), Gaps = 3/198 (1%)
Frame = +3
Query: 3 IGVKPPRGILMYGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEE 182
+G+ P+GIL+ G PG GKTL+ + G NG ++ AGESE NLR+ F +
Sbjct: 240 LGINGPKGILLVGAPGVGKTLLVHKATVDCGIKLVSTNGTDVFGPHAGESEENLRRVFNK 299
Query: 183 A---DKNSPAIIFIDELDAIAPKREKTHGEVERRIVSQLLTLMDGMKKSSHVIVMAATNR 353
A + P ++FIDELDA+ PKR + E E RIV+QLLTLMDG++ VIV+ ATNR
Sbjct: 300 ARYASRFGPCVLFIDELDALCPKRGSSGNEEENRIVAQLLTLMDGLESRGRVIVIGATNR 359
Query: 354 PNSIDPALRRFGRFDREIDIGIPDATGRLEILRIHTKNMKLGDDVDLXQIAAESHGHVGA 533
PN++DPALRR GRFDRE+ IG+P A RL+ILR H K + L DVDL +A + G+VGA
Sbjct: 360 PNALDPALRRPGRFDREVVIGVPSAGQRLDILRAHCKPINLSVDVDLTHLAEITVGYVGA 419
Query: 534 DLASLCSEAALQQIREKM 587
DLASLC +AA ++ +
Sbjct: 420 DLASLCQQAAFAALKRSL 437
Score = 79.4 bits (187), Expect = 3e-15
Identities = 41/109 (37%), Positives = 67/109 (61%)
Frame = +3
Query: 3 IGVKPPRGILMYGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEE 182
+G++ PRG+L+YGPPG KT + RA A+ T F ++ ++ S G++E LR E
Sbjct: 513 MGLRRPRGVLLYGPPGCCKTTLVRAAASSTHCTFMSLSCAQLFSSYVGDAERTLR----E 568
Query: 183 ADKNSPAIIFIDELDAIAPKREKTHGEVERRIVSQLLTLMDGMKKSSHV 329
P ++F+DELD++A KR G +E R+++ LL MDG+ S+++
Sbjct: 569 LVLQLPLLLFLDELDSLAGKRGNNLG-METRLLATLLNEMDGVGVSANI 616
Score = 74.5 bits (175), Expect = 8e-14
Identities = 40/77 (51%), Positives = 50/77 (64%)
Frame = +3
Query: 327 VIVMAATNRPNSIDPALRRFGRFDREIDIGIPDATGRLEILRIHTKNMKLGDDVDLXQIA 506
+I++AATNRP +ID AL R GR D I + PD RLEILR+HT+ L DVDL IA
Sbjct: 699 LILVAATNRPEAIDGALLRPGRIDCMIYVPPPDMKARLEILRVHTRFSPLAPDVDLSVIA 758
Query: 507 AESHGHVGADLASLCSE 557
+ + GADL +LC E
Sbjct: 759 EGTELYSGADLENLCRE 775
>SB_48561| Best HMM Match : AAA (HMM E-Value=0)
Length = 2021
Score = 177 bits (430), Expect = 1e-44
Identities = 90/198 (45%), Positives = 123/198 (62%), Gaps = 6/198 (3%)
Frame = +3
Query: 9 VKPPRGILMYGPPGTGKTLIARAVANETG-----AFFFLINGPEIMSKLAGESESNLRKA 173
+ PPRG+L +GPPGTGKTL+ARA+ANE FF+ G + +SK GESE LR
Sbjct: 915 ITPPRGVLFFGPPGTGKTLVARALANECSQGDKKVSFFMRKGADCLSKWVGESERQLRLL 974
Query: 174 FEEADKNSPAIIFIDELDAIAPKREKTHGEVERRIVSQLLTLMDGMKKSSHVIVMAATNR 353
F++A P+IIF DE+D +AP R ++ IVS LL LMDG+ V+++ ATNR
Sbjct: 975 FDQAYAMRPSIIFFDEIDGLAPVRSSRQDQIHSSIVSTLLALMDGLDSRGEVVIIGATNR 1034
Query: 354 PNSIDPALRRFGRFDREIDIGIPDATGRLEILRIHTKNMKLG-DDVDLXQIAAESHGHVG 530
++IDPALRR GRFDRE +PD R IL IHT+ + + ++A G+ G
Sbjct: 1035 IDAIDPALRRPGRFDREFQFALPDRDARRSILSIHTREWEPRLSQRFISELADYCVGYCG 1094
Query: 531 ADLASLCSEAALQQIREK 584
AD+ +LC+EAAL +R +
Sbjct: 1095 ADIKALCTEAALCALRRR 1112
>SB_45627| Best HMM Match : AAA (HMM E-Value=0)
Length = 628
Score = 173 bits (422), Expect = 1e-43
Identities = 105/173 (60%), Positives = 116/173 (67%), Gaps = 5/173 (2%)
Frame = +3
Query: 246 EKTHGEVERRIVSQLLTLMDGMKKSSHVIVMAATNRPNSIDPALRRFGRFDREIDIGIPD 425
++THGEVERRIVSQLLTLMDG+K+ SHVIVMAATNRPNS+D ALRRFGRFDRE+DIGIPD
Sbjct: 171 KETHGEVERRIVSQLLTLMDGLKQRSHVIVMAATNRPNSVDVALRRFGRFDREVDIGIPD 230
Query: 426 ATGRLEILRIHTKNMKLGDDVDLXQIAAESHGHVGADLASLCSEAALQQIREKMDLIDLE 605
ATGRLEILRIHTKNMKLGDDVDL Q IREKMDLIDLE
Sbjct: 231 ATGRLEILRIHTKNMKLGDDVDLEQ------------------------IREKMDLIDLE 266
Query: 606 DDQIDARGSQFSGCLHG*LPVRNDEIVXVGVT*DSG-----GEVPNVTWTDIG 749
D+ IDA L +D +GV+ S EVPNV+W DIG
Sbjct: 267 DETIDAE------VLDSLAVSMDDFRYAMGVSNPSALRETVVEVPNVSWDDIG 313
Score = 158 bits (384), Expect = 4e-39
Identities = 87/209 (41%), Positives = 124/209 (59%), Gaps = 4/209 (1%)
Frame = +3
Query: 6 GVKPPRGILMYGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEA 185
G+ P +G+L YGPPG GKTL+A+A+ANE A F I GPE+++ GESE+N+R F++A
Sbjct: 340 GMTPSKGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELLTMWFGESEANVRDVFDKA 399
Query: 186 DKNSPAIIFIDELDAIAPKREKTHGE---VERRIVSQLLTLMDGMKKSSHVIVMAATNRP 356
+P ++F DELD+IA R G+ R+++Q+LT MDGM +V ++ ATNRP
Sbjct: 400 RSAAPCVLFFDELDSIAKSRGGNVGDGGGAADRVINQVLTEMDGMNVKKNVFIIGATNRP 459
Query: 357 NSIDPALRRFGRFDREIDIGIPDATGRLEILRIHTKNMKLGDDVDLXQIAAESHGHVGAD 536
+ IDPA+ R GR D+ I I +PD DVDL +A +HG GAD
Sbjct: 460 DIIDPAILRPGRLDQLIYIPLPD-----------------DGDVDLDYVAKVTHGFSGAD 502
Query: 537 LASLCSEAALQQIREKMDL-IDLEDDQID 620
L +C A IRE ++ I+ E ++D
Sbjct: 503 LTEICQRACKLAIREAIETDINREKQRVD 531
Score = 46.4 bits (105), Expect = 2e-05
Identities = 27/41 (65%), Positives = 30/41 (73%)
Frame = +1
Query: 589 ISLTSRTIRLTPEVLNSLAVSMDNFRYAMTKSSXSALRETV 711
I L TI EVL+SLAVSMD+FRYAM S+ SALRETV
Sbjct: 263 IDLEDETI--DAEVLDSLAVSMDDFRYAMGVSNPSALRETV 301
>SB_7424| Best HMM Match : AAA (HMM E-Value=0)
Length = 294
Score = 167 bits (407), Expect = 6e-42
Identities = 87/194 (44%), Positives = 124/194 (63%), Gaps = 6/194 (3%)
Frame = +3
Query: 3 IGVKPPRGILMYGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEE 182
+G K P+G ++ GPPGTGKTL+A+AVA E G F I+G E + G + +R F +
Sbjct: 76 LGAKIPKGAILSGPPGTGKTLLAKAVAGEAGVPFLSISGSEFLEMFVGVGPARVRDLFAQ 135
Query: 183 ADKNSPAIIFIDELDAIAPKREK---THGEVER-RIVSQLLTLMDGMKKSSHVIVMAATN 350
A KN+P IIFIDE+DA+ R + G ER ++QLL MDG S++V+V++ TN
Sbjct: 136 ARKNAPCIIFIDEIDAVGRARGRGGQFGGHDERENTLNQLLVEMDGFSSSTNVVVLSGTN 195
Query: 351 RPNSIDPALRRFGRFDREIDIGIPDATGRLEILRIHTKNMKLGDDVD--LXQIAAESHGH 524
RP+ +DPAL R GRFDR+I + PD GR I ++H K +K D + ++AA + G
Sbjct: 196 RPDVLDPALLRPGRFDRQIHLPAPDIKGRCSIFKVHLKPIKKNVDEEKLARKMAALTPGF 255
Query: 525 VGADLASLCSEAAL 566
GAD+A++C+EAAL
Sbjct: 256 TGADIANVCNEAAL 269
>SB_55690| Best HMM Match : AAA (HMM E-Value=0)
Length = 1031
Score = 165 bits (402), Expect = 3e-41
Identities = 85/199 (42%), Positives = 117/199 (58%)
Frame = +3
Query: 24 GILMYGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEADKNSPA 203
G+L+YGPPGTGKTL+A VA E G F I GPE++SK G SE +R F A P
Sbjct: 703 GLLLYGPPGTGKTLLAGVVAKECGLNFISIKGPELLSKYIGASEQAVRDMFTRAQSAKPC 762
Query: 204 IIFIDELDAIAPKREKTHGEVERRIVSQLLTLMDGMKKSSHVIVMAATNRPNSIDPALRR 383
I+F DE D++AP+R V R+V+QLLT +DG++ V ++AAT+RP+ IDPAL R
Sbjct: 763 ILFFDEFDSLAPRRGHDSTGVTDRVVNQLLTQLDGVEGLKGVYILAATSRPDLIDPALLR 822
Query: 384 FGRFDREIDIGIPDATGRLEILRIHTKNMKLGDDVDLXQIAAESHGHVGADLASLCSEAA 563
GR D+ + IPD R E+ R + ++ L DD+DL I+ H GAD+ +L +
Sbjct: 823 PGRLDKCVYCPIPDQGDRREVFRALSHDLPLADDIDLDSISDSCHHFTGADIKALLYNSQ 882
Query: 564 LQQIREKMDLIDLEDDQID 620
L+ I I L +D
Sbjct: 883 LEAIHRTTSKIKLYGGVLD 901
>SB_49367| Best HMM Match : AAA (HMM E-Value=0)
Length = 976
Score = 165 bits (401), Expect = 3e-41
Identities = 79/151 (52%), Positives = 107/151 (70%), Gaps = 2/151 (1%)
Frame = +3
Query: 3 IGVKPPRGILMYGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEE 182
+GV P G L++GPPG GKTL+A A+A E F + EI+S ++GESE +R+ F
Sbjct: 705 LGVTPTTGFLLHGPPGCGKTLLAHAIAGELEMPFLKLAATEIVSGVSGESEEKVRELFTS 764
Query: 183 ADKNSPAIIFIDELDAIAPKREKTHGEVERRIVSQLLTLMDGMKKS--SHVIVMAATNRP 356
A +P I+F+DE+DAI PKRE ++ERRIVSQLL+ MD + + +HV+V+ ATNRP
Sbjct: 765 AVAQAPCILFLDEIDAITPKRENASKDMERRIVSQLLSCMDDLNNNPDAHVLVIGATNRP 824
Query: 357 NSIDPALRRFGRFDREIDIGIPDATGRLEIL 449
+S+DPALRR GRFDREI +GIPD + R I+
Sbjct: 825 DSLDPALRRAGRFDREISMGIPDESARARIV 855
>SB_40956| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1086
Score = 156 bits (379), Expect = 2e-38
Identities = 81/189 (42%), Positives = 121/189 (64%), Gaps = 4/189 (2%)
Frame = +3
Query: 24 GILMYGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEADKNSPA 203
G+L+YGPPGTGKTL+A+AVA E F + GPE+++ G+SE N+R+ F A SP
Sbjct: 846 GVLLYGPPGTGKTLMAKAVATECSLNFLSVKGPELINMYVGQSEQNVREVFSRAQAASPC 905
Query: 204 IIFIDELDAIAPKREKT--HGEVERRIVSQLLTLMDGMKKSSHVIVMAATNRPNSIDPAL 377
+IF DELD++AP R ++ G V R+V+QLL +DG+ + V V+ ATNRP+ +DPAL
Sbjct: 906 VIFFDELDSLAPNRGRSGDSGGVMDRVVAQLLAELDGLHSTCDVFVIGATNRPDLLDPAL 965
Query: 378 RRFGRFDREIDIGI-PDATGRLEILRIHTKNMKLGDDVDLXQIAAESHGHV-GADLASLC 551
R GRFD+ + +G+ D +L +L+ T+ D L + A + ++ GADL ++
Sbjct: 966 LRPGRFDKLLYLGVSEDHHAQLSVLKALTRKFTFSADFRLEEFANKLPLNLTGADLYAMA 1025
Query: 552 SEAALQQIR 578
S+A LQ +R
Sbjct: 1026 SDALLQAMR 1034
>SB_3115| Best HMM Match : AAA (HMM E-Value=0)
Length = 913
Score = 155 bits (377), Expect = 3e-38
Identities = 85/209 (40%), Positives = 123/209 (58%), Gaps = 7/209 (3%)
Frame = +3
Query: 3 IGVKPPRGILMYGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEE 182
+G K P+G L+ GPPGTGKTL+A+AVA E F + G + + AG + +R F
Sbjct: 153 LGAKIPKGALLVGPPGTGKTLLAKAVATEADVPFLSMAGSDFVEMFAGVGSARVRDLFTR 212
Query: 183 ADKNSPAIIFIDELDAIAPKREKT-----HGEVERRIVSQLLTLMDGMKKSSHVIVMAAT 347
A K +P I++IDE+DAI R+ + H E E + +QLL MDGM VI++A+T
Sbjct: 213 ARKLAPCIVYIDEVDAIGRSRKSSRSMGGHNEQENTL-NQLLVEMDGMNTLDGVIMLAST 271
Query: 348 NRPNSIDPALRRFGRFDREIDIGIPDATGRLEILRIHTKNMKLGDDVD--LXQIAAESHG 521
NR + +D AL R GRFDR I I +P R+EI +H K + L +D ++A + G
Sbjct: 272 NRADILDNALLRPGRFDRHIAIDLPTLPERMEIFEVHLKKLTLKRSIDQYTKRLAELTPG 331
Query: 522 HVGADLASLCSEAALQQIREKMDLIDLED 608
H GAD+A++C+EAAL R +D ++
Sbjct: 332 HSGADIANICNEAALHAARLNKKNVDTKN 360
>SB_33442| Best HMM Match : AAA (HMM E-Value=0)
Length = 369
Score = 151 bits (366), Expect = 6e-37
Identities = 79/167 (47%), Positives = 110/167 (65%), Gaps = 3/167 (1%)
Frame = +3
Query: 3 IGVKPPRGILMYGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEE 182
IG+ PPRG+L+YGPPG GKT++A+AVA+ T A F + G E + K GE +R F
Sbjct: 193 IGIDPPRGVLLYGPPGCGKTMLAKAVAHHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRL 252
Query: 183 ADKNSPAIIFIDELDAIAPKR--EKTHGEVE-RRIVSQLLTLMDGMKKSSHVIVMAATNR 353
A +N+PAIIFIDE+DAIA KR +T + E +RI+ +LL MDG ++ +V V+ ATNR
Sbjct: 253 AKENAPAIIFIDEIDAIATKRFDAQTGADREVQRILLELLNQMDGFDQNVNVKVIMATNR 312
Query: 354 PNSIDPALRRFGRFDREIDIGIPDATGRLEILRIHTKNMKLGDDVDL 494
+++DPAL R GR DR+I+ +PD + I T M L ++VDL
Sbjct: 313 QDTLDPALLRPGRLDRKIEFPLPDRRQKRLIFSTITNKMNLSEEVDL 359
>SB_732| Best HMM Match : AAA (HMM E-Value=0)
Length = 388
Score = 145 bits (352), Expect = 3e-35
Identities = 81/202 (40%), Positives = 127/202 (62%), Gaps = 16/202 (7%)
Frame = +3
Query: 3 IGVKPPRGILMYGPPGTGKTLIARAVANETGAFF-FLINGPEIMSKLAGESESNLRKAFE 179
+G+K +GIL++GPPGTGKTL+AR + +I+GPE+++K GESE+N+RK F
Sbjct: 177 MGLKHVKGILLFGPPGTGKTLMARQIGTMLNTREPKIISGPEVLNKFVGESEANIRKLFA 236
Query: 180 EA--------DKNSPAIIFIDELDAIAPKREK--THGE-VERRIVSQLLTLMDGMKKSSH 326
EA D ++ +I DE DA+ R T G V+ +V+QLL +DG+++ ++
Sbjct: 237 EAEEEQKRFGDNSALHLIIFDEFDAVCKSRYSYNTGGTGVQDSVVNQLLAKIDGVEQLNN 296
Query: 327 VIVMAATNRPNSIDPALRRFGRFDREIDIGIPDATGRLEILRIHTKNMK----LGDDVDL 494
V+++ TNR + ID AL R GR + +++IG+PD GR++IL+IHT M+ L DDVDL
Sbjct: 297 VLLIGMTNRRDLIDDALLRPGRLEVQVEIGLPDEEGRVQILKIHTAKMRENKVLADDVDL 356
Query: 495 XQIAAESHGHVGADLASLCSEA 560
++A ++ GA++ L A
Sbjct: 357 AELATQTKNFTGAEIEGLVRAA 378
>SB_9909| Best HMM Match : AAA (HMM E-Value=0)
Length = 400
Score = 135 bits (326), Expect = 4e-32
Identities = 64/144 (44%), Positives = 95/144 (65%), Gaps = 3/144 (2%)
Frame = +3
Query: 3 IGVKPPRGILMYGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEE 182
+G++PP+G+L++GPPGTGKTL ARAVAN T A F + G E++ K GE +R+ FE
Sbjct: 113 LGIEPPKGVLLFGPPGTGKTLCARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFEM 172
Query: 183 ADKNSPAIIFIDELDAIAPKR--EKTHGEVE-RRIVSQLLTLMDGMKKSSHVIVMAATNR 353
A I+F DE+DAI R + G+ E +R + +L+ +DG ++ V+ ATNR
Sbjct: 173 ARTKKACIVFFDEIDAIGGARFDDGAGGDNEVQRTMLELINQLDGFDPRGNIKVLMATNR 232
Query: 354 PNSIDPALRRFGRFDREIDIGIPD 425
P+++DPAL R GR DR+++ G+PD
Sbjct: 233 PDTLDPALMRPGRLDRKVEFGLPD 256
>SB_17703| Best HMM Match : Mito_carr (HMM E-Value=0)
Length = 611
Score = 124 bits (299), Expect = 8e-29
Identities = 56/123 (45%), Positives = 83/123 (67%), Gaps = 1/123 (0%)
Frame = +3
Query: 3 IGVKPPRGILMYGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEE 182
+G+ P GIL+ GPPG GKTL+A+A+ANE+G F + GPE+++ GESE +R+ F+
Sbjct: 12 LGLTHPPGILLAGPPGCGKTLLAKAIANESGINFISVKGPELLNMYVGESERAVRQVFQR 71
Query: 183 ADKNSPAIIFIDELDAIAPKRE-KTHGEVERRIVSQLLTLMDGMKKSSHVIVMAATNRPN 359
A ++P +IF DELD++ P+R + R+V+QLLT MDG++ HV +M ATN+P
Sbjct: 72 ARNSAPCVIFFDELDSLCPRRSGSSESGSSVRVVNQLLTEMDGLQARKHVFIMGATNKPG 131
Query: 360 SID 368
D
Sbjct: 132 IRD 134
>SB_56202| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 518
Score = 116 bits (278), Expect = 3e-26
Identities = 66/144 (45%), Positives = 91/144 (63%), Gaps = 7/144 (4%)
Frame = +3
Query: 12 KPPRGILMYGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEADK 191
+P RG+LM GPPGTGKT++A+AVA E G FF ++ + SK GESE +R FE A
Sbjct: 281 RPWRGVLMVGPPGTGKTMLAKAVATECGTTFFNVSSSTLTSKYRGESEKLVRILFEMARF 340
Query: 192 NSPAIIFIDELDAIAPKR-EKTHGEVERRIVSQLLTLMDGMKKSS------HVIVMAATN 350
+P+ IF+DE+D+I +R + E RR+ S+LL MDG+ SS V+V+AATN
Sbjct: 341 YAPSTIFVDEIDSICSRRGSDSEHEASRRVKSELLVQMDGVGGSSDDGETKQVMVLAATN 400
Query: 351 RPNSIDPALRRFGRFDREIDIGIP 422
P +D ALRR R ++ I I +P
Sbjct: 401 FPWDLDEALRR--RLEKRIYIPLP 422
>SB_28977| Best HMM Match : AAA (HMM E-Value=0)
Length = 442
Score = 114 bits (274), Expect = 8e-26
Identities = 63/181 (34%), Positives = 109/181 (60%), Gaps = 3/181 (1%)
Frame = +3
Query: 48 GTGKTLIARAVANETG-AFFFLINGPEIMSKLAGESESNLRKAFEEADKNSPAIIFIDEL 224
GTGK+ +A+AVA E + F ++ +++SK GESE +++ FE A +N P+IIFIDE+
Sbjct: 175 GTGKSYLAKAVATEANNSTFISVSSSDLVSKWLGESERLVKQLFELARENKPSIIFIDEV 234
Query: 225 DAIAPKREKTHGEVERRIVSQLLTLMDGM-KKSSHVIVMAATNRPNSIDPALRRFGRFDR 401
D++ R + E RRI ++ L M G+ + V+V+ ATN P ++D A+RR RF++
Sbjct: 235 DSLCGSRSENESESARRIKTEFLVQMQGVGVDNDQVLVLGATNIPWTLDSAIRR--RFEK 292
Query: 402 EIDIGIPDATGRLEILRIHTKNMK-LGDDVDLXQIAAESHGHVGADLASLCSEAALQQIR 578
I I +P+ R ++ +H K L ++ Q+ ++ G+ GAD++ + EA + +R
Sbjct: 293 RIYIPLPEQAARSKMFELHLGGSKTLLGAQEIKQLGQKTDGYSGADISVVVREALMMPVR 352
Query: 579 E 581
+
Sbjct: 353 K 353
>SB_5903| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 346
Score = 109 bits (262), Expect = 2e-24
Identities = 62/165 (37%), Positives = 92/165 (55%), Gaps = 3/165 (1%)
Frame = +3
Query: 123 EIMSKLAGESESNLRKAFEEADKNSPAIIFIDELDAIAPKR---EKTHGEVERRIVSQLL 293
+I G+ +R AF A + +PAIIFIDELDAI KR EK +R + +LL
Sbjct: 162 QIQEMFIGDGAKLVRDAFALAKEKAPAIIFIDELDAIGTKRFDSEKAGDREVQRTMLELL 221
Query: 294 TLMDGMKKSSHVIVMAATNRPNSIDPALRRFGRFDREIDIGIPDATGRLEILRIHTKNMK 473
+DG + V+AATNR + +DPAL R GR DR+I+ PD R IL+IH++ M
Sbjct: 222 NQLDGFSSHHDIKVIAATNRVDILDPALLRSGRLDRKIEFPNPDQEARARILQIHSRKMN 281
Query: 474 LGDDVDLXQIAAESHGHVGADLASLCSEAALQQIREKMDLIDLED 608
+ DV+ +++ + GA L ++C EA + +R + + ED
Sbjct: 282 VSGDVNFDELSRCTDDFNGAMLKAVCVEAGMIALRREATEVCHED 326
>SB_3919| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 442
Score = 107 bits (258), Expect = 7e-24
Identities = 60/161 (37%), Positives = 99/161 (61%), Gaps = 17/161 (10%)
Frame = +3
Query: 3 IGVKPPRGILMYGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKA--- 173
+G+ P+G+L+YGPPGTGKTL+ARAVA+ T F ++G E++ K GE +R+
Sbjct: 206 LGIDQPKGVLLYGPPGTGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGARMVRELFVM 265
Query: 174 -----------FEEADKNSPAIIFIDELDAIAPKREK--THGEVE-RRIVSQLLTLMDGM 311
F ++ +++P+IIF+DE+D+I R + + G+ E +R + +LL +DG
Sbjct: 266 ARHGENLQAMYFVDSREHAPSIIFMDEIDSIGSSRLEGGSGGDSEVQRTMLELLNQLDGF 325
Query: 312 KKSSHVIVMAATNRPNSIDPALRRFGRFDREIDIGIPDATG 434
+ + ++ V+ ATNR + +D AL R GR DR+I+ P+ G
Sbjct: 326 EATKNIKVIMATNRIDILDSALLRPGRIDRKIEFPPPNEEG 366
>SB_19460| Best HMM Match : AAA (HMM E-Value=0)
Length = 340
Score = 92.7 bits (220), Expect = 3e-19
Identities = 44/109 (40%), Positives = 72/109 (66%)
Frame = +3
Query: 3 IGVKPPRGILMYGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEE 182
+G++ PRG+L+YGPPG KT + RA A+ T F ++ ++ S G++E LR+ F +
Sbjct: 42 MGLRRPRGVLLYGPPGCCKTTLVRAAASSTHCTFMSLSCAQLFSSYVGDAERTLRELFLK 101
Query: 183 ADKNSPAIIFIDELDAIAPKREKTHGEVERRIVSQLLTLMDGMKKSSHV 329
A +PAI+F+DELD++A KR G +E R+++ LL MDG+ S+++
Sbjct: 102 ARATAPAILFLDELDSLAGKRGNNLG-METRLLATLLNEMDGVGVSANI 149
Score = 74.5 bits (175), Expect = 8e-14
Identities = 40/77 (51%), Positives = 50/77 (64%)
Frame = +3
Query: 327 VIVMAATNRPNSIDPALRRFGRFDREIDIGIPDATGRLEILRIHTKNMKLGDDVDLXQIA 506
+I++AATNRP +ID AL R GR D I + PD RLEILR+HT+ L DVDL IA
Sbjct: 232 LILVAATNRPEAIDGALLRPGRIDCMIYVPPPDMKARLEILRVHTRFSPLAPDVDLSVIA 291
Query: 507 AESHGHVGADLASLCSE 557
+ + GADL +LC E
Sbjct: 292 EGTELYSGADLENLCRE 308
>SB_35704| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 256
Score = 80.6 bits (190), Expect = 1e-15
Identities = 41/98 (41%), Positives = 56/98 (57%), Gaps = 1/98 (1%)
Frame = +3
Query: 3 IGVKPPRGILMYGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEE 182
+G K P G+L+ G PGTGKTL+A+AVA E G FF +G E G + +R F
Sbjct: 159 LGGKLPTGVLLIGSPGTGKTLLAKAVAGEAGVPFFFCSGSEFDEMFVGVGAARVRNLFAA 218
Query: 183 ADKNSPAIIFIDELDAIAPKR-EKTHGEVERRIVSQLL 293
A +++P I+F+DELDAI R H ++QLL
Sbjct: 219 AKEHAPCIVFVDELDAIGGSRVVHDHQPYSSMTLNQLL 256
>SB_33584| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 455
Score = 64.9 bits (151), Expect = 7e-11
Identities = 25/45 (55%), Positives = 37/45 (82%)
Frame = +3
Query: 3 IGVKPPRGILMYGPPGTGKTLIARAVANETGAFFFLINGPEIMSK 137
+G+KPP+G+++YG PGTGKTL+A+AVAN+T A F + G E++ K
Sbjct: 409 MGIKPPKGVILYGQPGTGKTLLAKAVANQTSATFLRVVGSELIQK 453
>SB_31892| Best HMM Match : AAA (HMM E-Value=6.2e-25)
Length = 420
Score = 62.9 bits (146), Expect = 3e-10
Identities = 48/160 (30%), Positives = 79/160 (49%), Gaps = 7/160 (4%)
Frame = +3
Query: 6 GVKPPRGILMYGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEA 185
G+ RG L+YGPPG GK+ +A+A E ++N + ++ L A
Sbjct: 218 GIPYRRGYLLYGPPGCGKSSFIQALAGELDYSICVMNLSD-----RSLTDDRLNHLMSVA 272
Query: 186 DKNSPAIIFIDELDAIAPKREKTH------GEVERRIV-SQLLTLMDGMKKSSHVIVMAA 344
+ S II ++++DA KR++T+ G + R+ S LL +DG+ S +V
Sbjct: 273 PQQS--IILLEDIDAAFVKRDETNAANKGGGMYQNRVTFSGLLNTLDGVASSEERVVFMT 330
Query: 345 TNRPNSIDPALRRFGRFDREIDIGIPDATGRLEILRIHTK 464
TN +DPAL R GR D + +I D R +++R+ +
Sbjct: 331 TNHLKRLDPALIRPGRVDFKQEI---DWASRSQLVRMFAR 367
>SB_33907| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 56
Score = 57.6 bits (133), Expect = 1e-08
Identities = 23/44 (52%), Positives = 34/44 (77%)
Frame = +3
Query: 3 IGVKPPRGILMYGPPGTGKTLIARAVANETGAFFFLINGPEIMS 134
+G+ P GIL+ GPPG GKTL+A+A+ANE+G F + GPE+++
Sbjct: 12 LGLTHPPGILLAGPPGCGKTLLAKAIANESGINFISVKGPELLN 55
>SB_30385| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 131
Score = 57.2 bits (132), Expect = 1e-08
Identities = 25/61 (40%), Positives = 35/61 (57%)
Frame = +3
Query: 3 IGVKPPRGILMYGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEE 182
+G+ P+GIL+ G PG GKTL+ + G NG ++ AGESE NLR+ F +
Sbjct: 70 LGINGPKGILLVGAPGVGKTLLVHKATVDCGIKLVSTNGTDVFGPHAGESEENLRRVFNK 129
Query: 183 A 185
A
Sbjct: 130 A 130
>SB_46732| Best HMM Match : AAA (HMM E-Value=0.044)
Length = 430
Score = 56.8 bits (131), Expect = 2e-08
Identities = 26/78 (33%), Positives = 48/78 (61%), Gaps = 1/78 (1%)
Frame = +3
Query: 21 RGILMYGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEADKNSP 200
R +L YGPPGTGKT+ A+++A +G + ++ G +++ + E + + K F+ A+ +
Sbjct: 330 RNLLFYGPPGTGKTMFAKSLARHSGMDYAVMTGGDVV-PMGKEGVTAMHKVFDWAETSRR 388
Query: 201 AI-IFIDELDAIAPKREK 251
+ +F+DE DA KR +
Sbjct: 389 GVLLFVDEADAFLRKRSQ 406
>SB_6656| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 461
Score = 53.2 bits (122), Expect = 2e-07
Identities = 31/118 (26%), Positives = 55/118 (46%), Gaps = 3/118 (2%)
Frame = +3
Query: 21 RGILMYGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGES--ESNLRKAFEEADKN 194
+ +L+ GP G GK ++ + ETGA F + I K G++ L F+ A +
Sbjct: 208 KSVLITGPRGVGKKMLVHCICTETGANLFDLTAANIAGKYPGKAGLAMLLHMVFKVARQL 267
Query: 195 SPAIIFIDELD-AIAPKREKTHGEVERRIVSQLLTLMDGMKKSSHVIVMAATNRPNSI 365
P+++FI + + K KT +R+ L L+ +K VI++ + +P I
Sbjct: 268 QPSVVFIGDAERTFVKKVPKTDKSDPKRLKKDLPKLLKTLKPEDRVIIIGTSRQPFDI 325
>SB_32582| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1151
Score = 40.3 bits (90), Expect = 0.002
Identities = 23/99 (23%), Positives = 47/99 (47%)
Frame = +3
Query: 195 SPAIIFIDELDAIAPKREKTHGEVERRIVSQLLTLMDGMKKSSHVIVMAATNRPNSIDPA 374
+PA + ID ++ + K +T E + +S + +L+D S + + T+R N + +
Sbjct: 195 TPAFLLIDNVEQLLGKETETEQETQNEFISLIKSLLDSPPAKSGSLKIILTSRANVEEQS 254
Query: 375 LRRFGRFDREIDIGIPDATGRLEILRIHTKNMKLGDDVD 491
LRR G ++ ++ + + I R K D++D
Sbjct: 255 LRRSGFSEKVVEKWDTETSKSFMIERSRYPIQKAEDEMD 293
>SB_25516| Best HMM Match : AAA_2 (HMM E-Value=0)
Length = 609
Score = 39.1 bits (87), Expect = 0.004
Identities = 26/75 (34%), Positives = 41/75 (54%), Gaps = 6/75 (8%)
Frame = +3
Query: 27 ILMYGPPGTGKTLIARAVANETGAFFFLINGPEI-MSKLAGES-ESNLRKAFEEA----D 188
IL+ GP G+GKTL+A+ +A F + + + + GE ES + K +EA +
Sbjct: 273 ILLLGPTGSGKTLLAQTIARCLDVPFAICDCTALTQAGYVGEDIESVIAKLLQEAGGNVE 332
Query: 189 KNSPAIIFIDELDAI 233
K I+F+DE+D I
Sbjct: 333 KAQQGIVFLDEVDKI 347
>SB_3478| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 62
Score = 39.1 bits (87), Expect = 0.004
Identities = 18/50 (36%), Positives = 27/50 (54%)
Frame = +3
Query: 390 RFDREIDIGIPDATGRLEILRIHTKNMKLGDDVDLXQIAAESHGHVGADL 539
R DR+I+ +PD + I IHT+ M L +DV+L + GAD+
Sbjct: 2 RIDRKIEFPMPDEKTKRRIFNIHTQRMTLAEDVNLEEFIMAKDDLSGADI 51
>SB_11032| Best HMM Match : AAA (HMM E-Value=3.5)
Length = 111
Score = 38.3 bits (85), Expect = 0.007
Identities = 19/50 (38%), Positives = 28/50 (56%)
Frame = +3
Query: 144 GESESNLRKAFEEADKNSPAIIFIDELDAIAPKREKTHGEVERRIVSQLL 293
GE E +R F A PA+IF+DE+D++ +R E RRI ++ L
Sbjct: 2 GEGEKMVRAMFAVARCYLPAVIFMDEIDSLLTQRTDGEHEASRRIKTEFL 51
>SB_21493| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 306
Score = 33.5 bits (73), Expect = 0.19
Identities = 20/48 (41%), Positives = 26/48 (54%), Gaps = 2/48 (4%)
Frame = +3
Query: 21 RGILMYGPPGTGKTLIARAVANETG--AFFFLINGPEIMSKLAGESES 158
R +L+ G PGTGKT IA +A G F I G EI S ++E+
Sbjct: 170 RAVLIAGQPGTGKTAIAMGMAQSLGPDTPFTSIAGSEIFSLEMSKTEA 217
>SB_26897| Best HMM Match : AAA (HMM E-Value=4.2e-12)
Length = 230
Score = 32.7 bits (71), Expect = 0.33
Identities = 43/191 (22%), Positives = 80/191 (41%), Gaps = 15/191 (7%)
Frame = +3
Query: 27 ILMYGPPGTGKTLIARAVANET------GAFFFLINGPEI--MSKLAGE--SESNLRKAF 176
+L YGPPGTGKT AVA + G+ +N + + + G+ S ++ R F
Sbjct: 13 LLFYGPPGTGKTSTILAVAKQLYPDKQFGSMVLELNASDDRGIGIVRGDILSFASTRTIF 72
Query: 177 EEADKNSPAIIFIDELDAIAPKREKTHGEVERRIV--SQLLTLMDGMKKSSHVIVMAATN 350
+ K ++ +DE DA+ + V + ++ + + + K + T
Sbjct: 73 KSGFK----LVILDEADAMTQDAQNALRRVMEKFTENTRFCLICNYLTKIIPALQSRCTR 128
Query: 351 ---RPNSIDPALRRFGRFDREIDIGIPDATGRLEILRIHTKNMKLGDDVDLXQIAAESHG 521
P S+D L R + + D GR +LR+ +M+ +++ Q + ++
Sbjct: 129 FRFGPLSVDQMLPRLEHVIESERVNVTD-DGRKSLLRLAQGDMR--KVLNILQSTSMAYS 185
Query: 522 HVGADLASLCS 554
V D LC+
Sbjct: 186 VVNEDHVYLCT 196
>SB_59437| Best HMM Match : AAA (HMM E-Value=7.4e-08)
Length = 568
Score = 32.7 bits (71), Expect = 0.33
Identities = 15/39 (38%), Positives = 20/39 (51%)
Frame = +3
Query: 21 RGILMYGPPGTGKTLIARAVANETGAFFFLINGPEIMSK 137
+ L+ GPPG GKT A V E G + +N + SK
Sbjct: 272 KAALLSGPPGVGKTTTATLVCQELGYSYVEMNASDARSK 310
>SB_54124| Best HMM Match : AAA (HMM E-Value=7.8e-08)
Length = 251
Score = 32.3 bits (70), Expect = 0.43
Identities = 23/85 (27%), Positives = 43/85 (50%), Gaps = 7/85 (8%)
Frame = +3
Query: 27 ILMYGPPGTGKTLIARAVA---NETGAF----FFLINGPEIMSKLAGESESNLRKAFEEA 185
++ G PGTGKT +AR +A +E G + ++ + GE+ + + A + A
Sbjct: 16 VMFVGNPGTGKTTMARMMAGILHEAGVIKRNKVIEVQRTALVGRYIGETGTKTKGAIDRA 75
Query: 186 DKNSPAIIFIDELDAIAPKREKTHG 260
K S ++ IDE ++ + +K +G
Sbjct: 76 -KGS--VLLIDEAYRLSSESDKNYG 97
>SB_43853| Best HMM Match : AAA_5 (HMM E-Value=0)
Length = 2065
Score = 32.3 bits (70), Expect = 0.43
Identities = 15/33 (45%), Positives = 19/33 (57%)
Frame = +3
Query: 18 PRGILMYGPPGTGKTLIARAVANETGAFFFLIN 116
PR IL+ G PG GKT + A+A +G IN
Sbjct: 1617 PRPILLEGSPGVGKTSLVSAIAKASGHELVRIN 1649
Score = 28.7 bits (61), Expect = 5.3
Identities = 17/49 (34%), Positives = 24/49 (48%)
Frame = +3
Query: 3 IGVKPPRGILMYGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGE 149
+ V G+L+ GP G+GKT + VA+ G PEIM G+
Sbjct: 113 LAVAAGSGVLLEGPVGSGKTCLVEHVASMCGR----STPPEIMKVQLGD 157
>SB_380| Best HMM Match : AAA (HMM E-Value=0.14)
Length = 508
Score = 31.5 bits (68), Expect = 0.76
Identities = 13/29 (44%), Positives = 18/29 (62%)
Frame = +3
Query: 15 PPRGILMYGPPGTGKTLIARAVANETGAF 101
PP +++ GP G GKTL R +A + G F
Sbjct: 118 PPIRLMIVGPKGAGKTLHGRELARKLGLF 146
>SB_35973| Best HMM Match : zf-CCHC (HMM E-Value=0.0026)
Length = 779
Score = 31.1 bits (67), Expect = 1.00
Identities = 9/16 (56%), Positives = 14/16 (87%)
Frame = +3
Query: 3 IGVKPPRGILMYGPPG 50
+G+ PP+G L++GPPG
Sbjct: 164 VGIAPPKGCLLFGPPG 179
>SB_379| Best HMM Match : ADK (HMM E-Value=3.2e-05)
Length = 991
Score = 31.1 bits (67), Expect = 1.00
Identities = 12/29 (41%), Positives = 19/29 (65%)
Frame = +3
Query: 12 KPPRGILMYGPPGTGKTLIARAVANETGA 98
+PP + + GPP +GKTL+A+ +A A
Sbjct: 317 RPPCKVCVLGPPHSGKTLVAKQLAERYNA 345
>SB_58910| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 177
Score = 30.3 bits (65), Expect = 1.7
Identities = 15/40 (37%), Positives = 22/40 (55%)
Frame = +3
Query: 489 DLXQIAAESHGHVGADLASLCSEAALQQIREKMDLIDLED 608
D + S G GADL ++C+EA + IR + D + ED
Sbjct: 115 DYEAVVKLSDGFNGADLRNVCTEAGMFAIRGERDYVIEED 154
>SB_34154| Best HMM Match : UvrD-helicase (HMM E-Value=0.064)
Length = 1064
Score = 30.3 bits (65), Expect = 1.7
Identities = 11/20 (55%), Positives = 14/20 (70%)
Frame = +3
Query: 6 GVKPPRGILMYGPPGTGKTL 65
G P L++GPPGTGKT+
Sbjct: 547 GTSRPHPYLIFGPPGTGKTI 566
>SB_58663| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1008
Score = 29.9 bits (64), Expect = 2.3
Identities = 27/128 (21%), Positives = 52/128 (40%)
Frame = +3
Query: 300 MDGMKKSSHVIVMAATNRPNSIDPALRRFGRFDREIDIGIPDATGRLEILRIHTKNMKLG 479
++GM K + + ++ S+D + +GR RE+ ++L+I + K+
Sbjct: 105 IEGMTKINEELKAKLCSQKQSLDEVTQNYGRLQREM------CATEDKLLQITRERNKIE 158
Query: 480 DDVDLXQIAAESHGHVGADLASLCSEAALQQIREKMDLIDLEDDQIDARGSQFSGCLHG* 659
+ + Q E A+ + ++E DL++ E D A+ + G
Sbjct: 159 EQLLAEQQGGEERAARQAEEMDHIKADHAKAMQEATDLLNRERDAFKAQSLELERACQG- 217
Query: 660 LPVRNDEI 683
L V DEI
Sbjct: 218 LKVAGDEI 225
>SB_8371| Best HMM Match : Vicilin_N (HMM E-Value=0.11)
Length = 323
Score = 29.9 bits (64), Expect = 2.3
Identities = 18/55 (32%), Positives = 27/55 (49%), Gaps = 1/55 (1%)
Frame = -1
Query: 675 HCVPEVIHGDSQRIENLWRQSDRPRGQ*DPSSHESAA-RLPPSTETRDQRPRDRE 514
H + + QRIE L + D RG+ + +S E RLP STE +++E
Sbjct: 218 HQLSHKVQRQQQRIEELTCELDLARGELEKNSMEEVTDRLPQSTEIHQLLDKNQE 272
>SB_57268| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 912
Score = 29.5 bits (63), Expect = 3.0
Identities = 18/54 (33%), Positives = 30/54 (55%), Gaps = 5/54 (9%)
Frame = +3
Query: 342 ATNRPNSIDPALRRFGRFDREIDIGIP----DATGRLEIL-RIHTKNMKLGDDV 488
+T R N +DP +RR R + +I IP T + ++L +IHTK +G+ +
Sbjct: 348 STKRKNPMDPVIRRRKRRGQGGEISIPCEPDKKTLKAQLLQKIHTKEYSIGERI 401
>SB_51808| Best HMM Match : OmpA (HMM E-Value=0.72)
Length = 516
Score = 29.5 bits (63), Expect = 3.0
Identities = 18/54 (33%), Positives = 30/54 (55%), Gaps = 5/54 (9%)
Frame = +3
Query: 342 ATNRPNSIDPALRRFGRFDREIDIGIP----DATGRLEIL-RIHTKNMKLGDDV 488
+T R N +DP +RR R + +I IP T + ++L +IHTK +G+ +
Sbjct: 355 STKRKNPMDPVIRRRKRRGQGGEISIPCEPDKKTLKAQLLQKIHTKEYSIGERI 408
>SB_46519| Best HMM Match : DUF720 (HMM E-Value=0.49)
Length = 1205
Score = 29.5 bits (63), Expect = 3.0
Identities = 18/54 (33%), Positives = 30/54 (55%), Gaps = 5/54 (9%)
Frame = +3
Query: 342 ATNRPNSIDPALRRFGRFDREIDIGIP----DATGRLEIL-RIHTKNMKLGDDV 488
+T R N +DP +RR R + +I IP T + ++L +IHTK +G+ +
Sbjct: 273 STKRKNPMDPVIRRRKRRGQGGEISIPCEPDKKTLKAQLLQKIHTKEYSIGERI 326
>SB_44158| Best HMM Match : OmpA (HMM E-Value=0.72)
Length = 406
Score = 29.5 bits (63), Expect = 3.0
Identities = 18/54 (33%), Positives = 30/54 (55%), Gaps = 5/54 (9%)
Frame = +3
Query: 342 ATNRPNSIDPALRRFGRFDREIDIGIP----DATGRLEIL-RIHTKNMKLGDDV 488
+T R N +DP +RR R + +I IP T + ++L +IHTK +G+ +
Sbjct: 349 STKRKNPMDPVIRRRKRRGQGGEISIPCEPDKKTLKAQLLQKIHTKEYSIGERI 402
>SB_42682| Best HMM Match : OmpA (HMM E-Value=0.72)
Length = 296
Score = 29.5 bits (63), Expect = 3.0
Identities = 18/54 (33%), Positives = 30/54 (55%), Gaps = 5/54 (9%)
Frame = +3
Query: 342 ATNRPNSIDPALRRFGRFDREIDIGIP----DATGRLEIL-RIHTKNMKLGDDV 488
+T R N +DP +RR R + +I IP T + ++L +IHTK +G+ +
Sbjct: 65 STKRKNPMDPVIRRRKRRGQGGEISIPCEPDKKTLKAQLLQKIHTKEYSIGERI 118
>SB_25694| Best HMM Match : RVT_1 (HMM E-Value=1.9e-22)
Length = 1797
Score = 29.5 bits (63), Expect = 3.0
Identities = 18/54 (33%), Positives = 30/54 (55%), Gaps = 5/54 (9%)
Frame = +3
Query: 342 ATNRPNSIDPALRRFGRFDREIDIGIP----DATGRLEIL-RIHTKNMKLGDDV 488
+T R N +DP +RR R + +I IP T + ++L +IHTK +G+ +
Sbjct: 283 STKRKNPMDPVIRRRERRGQGGEISIPCEPDKKTLKAQLLQKIHTKEYSIGERI 336
>SB_10656| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1931
Score = 29.5 bits (63), Expect = 3.0
Identities = 20/57 (35%), Positives = 29/57 (50%)
Frame = +3
Query: 51 TGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEADKNSPAIIFIDE 221
+GKTLIARA NE A E+M K A E + KA + A ++ + ++E
Sbjct: 1655 SGKTLIARAGENEGNA--------EVMGKTADELKEKATKAAQNATESKTKALKLEE 1703
>SB_4259| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 540
Score = 29.5 bits (63), Expect = 3.0
Identities = 18/54 (33%), Positives = 30/54 (55%), Gaps = 5/54 (9%)
Frame = +3
Query: 342 ATNRPNSIDPALRRFGRFDREIDIGIP----DATGRLEIL-RIHTKNMKLGDDV 488
+T R N +DP +RR R + +I IP T + ++L +IHTK +G+ +
Sbjct: 413 STKRKNPMDPVIRRRKRRGQGGEISIPCEPDKKTLKAQLLQKIHTKEYSIGERI 466
>SB_42068| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 3367
Score = 29.5 bits (63), Expect = 3.0
Identities = 12/30 (40%), Positives = 17/30 (56%)
Frame = +3
Query: 36 YGPPGTGKTLIARAVANETGAFFFLINGPE 125
+GP GTGKT +A+ + G F + N E
Sbjct: 1854 FGPAGTGKTESVKALGQQLGRFVLVFNCDE 1883
>SB_36695| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 412
Score = 29.5 bits (63), Expect = 3.0
Identities = 18/54 (33%), Positives = 30/54 (55%), Gaps = 5/54 (9%)
Frame = +3
Query: 342 ATNRPNSIDPALRRFGRFDREIDIGIP----DATGRLEIL-RIHTKNMKLGDDV 488
+T R N +DP +RR R + +I IP T + ++L +IHTK +G+ +
Sbjct: 355 STKRKNPMDPVIRRRKRRGQGGEISIPCEPDKKTLKAQLLQKIHTKEYSIGERI 408
>SB_19755| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 621
Score = 29.5 bits (63), Expect = 3.0
Identities = 18/54 (33%), Positives = 30/54 (55%), Gaps = 5/54 (9%)
Frame = +3
Query: 342 ATNRPNSIDPALRRFGRFDREIDIGIP----DATGRLEIL-RIHTKNMKLGDDV 488
+T R N +DP +RR R + +I IP T + ++L +IHTK +G+ +
Sbjct: 283 STKRKNPMDPVIRRRKRRGQGGEISIPCEPDKKTLKAQLLQKIHTKEYSIGERI 336
>SB_16760| Best HMM Match : OmpA (HMM E-Value=0.72)
Length = 933
Score = 29.5 bits (63), Expect = 3.0
Identities = 18/54 (33%), Positives = 30/54 (55%), Gaps = 5/54 (9%)
Frame = +3
Query: 342 ATNRPNSIDPALRRFGRFDREIDIGIP----DATGRLEIL-RIHTKNMKLGDDV 488
+T R N +DP +RR R + +I IP T + ++L +IHTK +G+ +
Sbjct: 355 STKRKNPMDPVIRRRKRRGQGGEISIPCEPDKKTLKAQLLQKIHTKEYSIGERI 408
>SB_15796| Best HMM Match : RVT_1 (HMM E-Value=0.00082)
Length = 1304
Score = 29.5 bits (63), Expect = 3.0
Identities = 18/54 (33%), Positives = 30/54 (55%), Gaps = 5/54 (9%)
Frame = +3
Query: 342 ATNRPNSIDPALRRFGRFDREIDIGIP----DATGRLEIL-RIHTKNMKLGDDV 488
+T R N +DP +RR R + +I IP T + ++L +IHTK +G+ +
Sbjct: 702 STKRKNPMDPVIRRRERRGQGGEISIPCEPDKKTLKAQLLQKIHTKEYSIGERI 755
>SB_10418| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 477
Score = 29.5 bits (63), Expect = 3.0
Identities = 11/22 (50%), Positives = 14/22 (63%)
Frame = +3
Query: 30 LMYGPPGTGKTLIARAVANETG 95
L+ GPPG GKT +A +A G
Sbjct: 384 LLCGPPGLGKTTLAHVIAQHAG 405
>SB_23422| Best HMM Match : Propeptide_C1 (HMM E-Value=7.2)
Length = 628
Score = 29.1 bits (62), Expect = 4.0
Identities = 11/20 (55%), Positives = 14/20 (70%)
Frame = +3
Query: 6 GVKPPRGILMYGPPGTGKTL 65
G P L++GPPGTGKT+
Sbjct: 587 GQSRPTPYLLFGPPGTGKTV 606
>SB_27721| Best HMM Match : CRPA (HMM E-Value=2.4)
Length = 161
Score = 28.3 bits (60), Expect = 7.0
Identities = 12/25 (48%), Positives = 19/25 (76%)
Frame = +3
Query: 528 GADLASLCSEAALQQIREKMDLIDL 602
GADLA+L EA++ +RE+++L L
Sbjct: 2 GADLAALVREASMAALRERINLTSL 26
>SB_16306| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 958
Score = 28.3 bits (60), Expect = 7.0
Identities = 16/46 (34%), Positives = 23/46 (50%), Gaps = 2/46 (4%)
Frame = +3
Query: 9 VKPPRGILMYGPPGTGKTLIARAVANETG--AFFFLINGPEIMSKL 140
V+P + + GP G+GKT + +A A LING + KL
Sbjct: 32 VRPGEMLALMGPSGSGKTTLLNVLAGRMAKDAGDVLINGKHMNKKL 77
>SB_13937| Best HMM Match : zf-CCCH (HMM E-Value=0.0017)
Length = 1495
Score = 28.3 bits (60), Expect = 7.0
Identities = 11/28 (39%), Positives = 21/28 (75%), Gaps = 1/28 (3%)
Frame = +3
Query: 9 VKPPR-GILMYGPPGTGKTLIARAVANE 89
++P R I++ GPPG+GKT +A+ + ++
Sbjct: 1245 IRPDRIVIILRGPPGSGKTHVAKLIKDK 1272
>SB_3294| Best HMM Match : DUF755 (HMM E-Value=0.22)
Length = 884
Score = 28.3 bits (60), Expect = 7.0
Identities = 16/54 (29%), Positives = 26/54 (48%)
Frame = +3
Query: 474 LGDDVDLXQIAAESHGHVGADLASLCSEAALQQIREKMDLIDLEDDQIDARGSQ 635
L D +L AE H HVG + ++C A ++ ++DL A+GS+
Sbjct: 678 LPSDENLASTGAE-HIHVGREQPAICGTAPTNGAQQSQGILDLNHVIKKAKGSE 730
>SB_38518| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1399
Score = 27.9 bits (59), Expect = 9.3
Identities = 16/65 (24%), Positives = 28/65 (43%)
Frame = +3
Query: 216 DELDAIAPKREKTHGEVERRIVSQLLTLMDGMKKSSHVIVMAATNRPNSIDPALRRFGRF 395
D+++ +PK K G +R +S+ + ++ R S D + G+F
Sbjct: 1215 DDVEVTSPKTAKNTGTSQRPSLSRNSASSHSREDRGKESSRTSSTRRTSSDKYAKTTGKF 1274
Query: 396 DREID 410
REID
Sbjct: 1275 SREID 1279
>SB_26376| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1018
Score = 27.9 bits (59), Expect = 9.3
Identities = 22/66 (33%), Positives = 35/66 (53%), Gaps = 1/66 (1%)
Frame = -2
Query: 692 DXDDFVIAYRKL-SMETARELRTSGVNLIVLEVNEIHLLTNLLQGCLRAQRREISAHVTV 516
D F+ R+L + ETA E TS ++ ++ EVN++ L N + L+ Q E+S +T
Sbjct: 145 DMWQFININRRLGATETAIEKLTSLLDNMMAEVNDVKELANGIDD-LKKQISEVSLELTA 203
Query: 515 RLCCDL 498
C L
Sbjct: 204 CTKCIL 209
>SB_10624| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2193
Score = 27.9 bits (59), Expect = 9.3
Identities = 15/33 (45%), Positives = 20/33 (60%), Gaps = 1/33 (3%)
Frame = +3
Query: 396 DREID-IGIPDATGRLEILRIHTKNMKLGDDVD 491
+RE+D G DA R E++ + TKN L DVD
Sbjct: 111 NRELDGKGTSDADLRKEVIELRTKNKTLERDVD 143
>SB_8559| Best HMM Match : Dpy-30 (HMM E-Value=3.7e-11)
Length = 806
Score = 27.9 bits (59), Expect = 9.3
Identities = 19/94 (20%), Positives = 43/94 (45%), Gaps = 2/94 (2%)
Frame = +3
Query: 6 GVKPPRGILMYGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEA 185
G+ P R ++ GPP +GKTL+ + + I ++ + + + + +A ++
Sbjct: 355 GLLPVRACIL-GPPASGKTLVVKQLCTHYKLHHIRIQ--SVIDEAIEKLQQSAARADQDN 411
Query: 186 DKNSPAIIFIDE--LDAIAPKREKTHGEVERRIV 281
D D+ L+A+ +E+ +G E + +
Sbjct: 412 DDEDDMKAQEDQELLEALLESKEQNNGRYEDQYI 445
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,997,476
Number of Sequences: 59808
Number of extensions: 426076
Number of successful extensions: 1494
Number of sequences better than 10.0: 64
Number of HSP's better than 10.0 without gapping: 1309
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1464
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 2034222073
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -