BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= brP-0633 (750 letters) Database: nematostella 59,808 sequences; 16,821,457 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value SB_14682| Best HMM Match : No HMM Matches (HMM E-Value=.) 239 2e-63 SB_37200| Best HMM Match : No HMM Matches (HMM E-Value=.) 202 3e-52 SB_48561| Best HMM Match : AAA (HMM E-Value=0) 177 1e-44 SB_45627| Best HMM Match : AAA (HMM E-Value=0) 173 1e-43 SB_7424| Best HMM Match : AAA (HMM E-Value=0) 167 6e-42 SB_55690| Best HMM Match : AAA (HMM E-Value=0) 165 3e-41 SB_49367| Best HMM Match : AAA (HMM E-Value=0) 165 3e-41 SB_40956| Best HMM Match : No HMM Matches (HMM E-Value=.) 156 2e-38 SB_3115| Best HMM Match : AAA (HMM E-Value=0) 155 3e-38 SB_33442| Best HMM Match : AAA (HMM E-Value=0) 151 6e-37 SB_732| Best HMM Match : AAA (HMM E-Value=0) 145 3e-35 SB_9909| Best HMM Match : AAA (HMM E-Value=0) 135 4e-32 SB_17703| Best HMM Match : Mito_carr (HMM E-Value=0) 124 8e-29 SB_56202| Best HMM Match : No HMM Matches (HMM E-Value=.) 116 3e-26 SB_28977| Best HMM Match : AAA (HMM E-Value=0) 114 8e-26 SB_5903| Best HMM Match : No HMM Matches (HMM E-Value=.) 109 2e-24 SB_3919| Best HMM Match : No HMM Matches (HMM E-Value=.) 107 7e-24 SB_19460| Best HMM Match : AAA (HMM E-Value=0) 93 3e-19 SB_35704| Best HMM Match : No HMM Matches (HMM E-Value=.) 81 1e-15 SB_33584| Best HMM Match : No HMM Matches (HMM E-Value=.) 65 7e-11 SB_31892| Best HMM Match : AAA (HMM E-Value=6.2e-25) 63 3e-10 SB_33907| Best HMM Match : No HMM Matches (HMM E-Value=.) 58 1e-08 SB_30385| Best HMM Match : No HMM Matches (HMM E-Value=.) 57 1e-08 SB_46732| Best HMM Match : AAA (HMM E-Value=0.044) 57 2e-08 SB_6656| Best HMM Match : No HMM Matches (HMM E-Value=.) 53 2e-07 SB_32582| Best HMM Match : No HMM Matches (HMM E-Value=.) 40 0.002 SB_25516| Best HMM Match : AAA_2 (HMM E-Value=0) 39 0.004 SB_3478| Best HMM Match : No HMM Matches (HMM E-Value=.) 39 0.004 SB_11032| Best HMM Match : AAA (HMM E-Value=3.5) 38 0.007 SB_21493| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.19 SB_26897| Best HMM Match : AAA (HMM E-Value=4.2e-12) 33 0.33 SB_59437| Best HMM Match : AAA (HMM E-Value=7.4e-08) 33 0.33 SB_54124| Best HMM Match : AAA (HMM E-Value=7.8e-08) 32 0.43 SB_43853| Best HMM Match : AAA_5 (HMM E-Value=0) 32 0.43 SB_380| Best HMM Match : AAA (HMM E-Value=0.14) 31 0.76 SB_35973| Best HMM Match : zf-CCHC (HMM E-Value=0.0026) 31 1.00 SB_379| Best HMM Match : ADK (HMM E-Value=3.2e-05) 31 1.00 SB_58910| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.7 SB_34154| Best HMM Match : UvrD-helicase (HMM E-Value=0.064) 30 1.7 SB_58663| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.3 SB_8371| Best HMM Match : Vicilin_N (HMM E-Value=0.11) 30 2.3 SB_57268| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.0 SB_51808| Best HMM Match : OmpA (HMM E-Value=0.72) 29 3.0 SB_46519| Best HMM Match : DUF720 (HMM E-Value=0.49) 29 3.0 SB_44158| Best HMM Match : OmpA (HMM E-Value=0.72) 29 3.0 SB_42682| Best HMM Match : OmpA (HMM E-Value=0.72) 29 3.0 SB_25694| Best HMM Match : RVT_1 (HMM E-Value=1.9e-22) 29 3.0 SB_10656| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.0 SB_4259| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.0 SB_42068| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.0 SB_36695| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.0 SB_19755| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.0 SB_16760| Best HMM Match : OmpA (HMM E-Value=0.72) 29 3.0 SB_15796| Best HMM Match : RVT_1 (HMM E-Value=0.00082) 29 3.0 SB_10418| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.0 SB_23422| Best HMM Match : Propeptide_C1 (HMM E-Value=7.2) 29 4.0 SB_27721| Best HMM Match : CRPA (HMM E-Value=2.4) 28 7.0 SB_16306| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.0 SB_13937| Best HMM Match : zf-CCCH (HMM E-Value=0.0017) 28 7.0 SB_3294| Best HMM Match : DUF755 (HMM E-Value=0.22) 28 7.0 SB_38518| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.3 SB_26376| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.3 SB_10624| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.3 SB_8559| Best HMM Match : Dpy-30 (HMM E-Value=3.7e-11) 28 9.3 >SB_14682| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 802 Score = 239 bits (584), Expect = 2e-63 Identities = 128/255 (50%), Positives = 168/255 (65%), Gaps = 7/255 (2%) Frame = +3 Query: 6 GVKPPRGILMYGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEA 185 GV PPRGIL+YGP GTGKT+IARAVANETG FF INGPE++S+ GE+E+ LR+ F EA Sbjct: 286 GVPPPRGILLYGPSGTGKTMIARAVANETGVHFFCINGPEVLSRYYGETEARLREIFTEA 345 Query: 186 DKNSPAIIFIDELDAIAPKREKTHGEVERRIVSQLLTLMDGMKKSS---HVIVMAATNRP 356 SP+I+FIDELDA+ P+R+K E ERR+V+ LLTLMDGM S +V+V+AATNRP Sbjct: 346 QNKSPSIVFIDELDALCPRRDKVQNEFERRVVATLLTLMDGMHMKSTDTYVMVLAATNRP 405 Query: 357 NSIDPALRRFGRFDREIDIGIPDATGRLEILRIHTKNMKLG-DDVDLXQIAAESHGHVGA 533 +++DPALRR GRFDREI+IGIP T R +IL KN+ D D+ +A +HG+VGA Sbjct: 406 DALDPALRRPGRFDREIEIGIPSVTDRRDILVTLLKNVPHSLHDEDISSLAESAHGYVGA 465 Query: 534 DLASLCSEAALQQIREKMDLIDLEDDQ-IDARGSQFS-GCLHG*LPVRND-EIVXVGVT* 704 DLA+ C EA+L + + D Q ++ R ++ L +R V Sbjct: 466 DLAAACKEASLYAFKRSLHNHDNGSSQSLEQRDARIKRELLVSSEDMRAAFRCVRPSAMR 525 Query: 705 DSGGEVPNVTWTDIG 749 + EVP V W+D+G Sbjct: 526 EVALEVPKVHWSDVG 540 Score = 186 bits (454), Expect = 1e-47 Identities = 95/202 (47%), Positives = 131/202 (64%), Gaps = 1/202 (0%) Frame = +3 Query: 3 IGVKPPRGILMYGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEE 182 +G++PPRGILMYGPPG KTLIARA+A E+G F I GPE+ SK GESE +R+ F + Sbjct: 566 LGIRPPRGILMYGPPGCSKTLIARALATESGLNFIAIKGPELFSKWVGESEKAVREVFLK 625 Query: 183 ADKNSPAIIFIDELDAIAPKREKTHG-EVERRIVSQLLTLMDGMKKSSHVIVMAATNRPN 359 A +P+I+F DELDAIA +R T G +V R+++QLLT +DG++ VI +AATNRP+ Sbjct: 626 ARATAPSIVFFDELDAIAGQRNSTGGSDVNDRVLTQLLTELDGVETLKDVIFIAATNRPD 685 Query: 360 SIDPALRRFGRFDREIDIGIPDATGRLEILRIHTKNMKLGDDVDLXQIAAESHGHVGADL 539 ID AL R GR DR I + +P R IL IH +DL + + G+ GA++ Sbjct: 686 MIDKALMRPGRVDRLIYVPLPCWDTRRHILEIHLARTPCEGSLDLEDLVERTEGYSGAEI 745 Query: 540 ASLCSEAALQQIREKMDLIDLE 605 A++C EAAL ++E + +E Sbjct: 746 AAVCREAALAALQENIQAESVE 767 >SB_37200| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 908 Score = 202 bits (492), Expect = 3e-52 Identities = 99/198 (50%), Positives = 131/198 (66%), Gaps = 3/198 (1%) Frame = +3 Query: 3 IGVKPPRGILMYGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEE 182 +G+ P+GIL+ G PG GKTL+ + G NG ++ AGESE NLR+ F + Sbjct: 240 LGINGPKGILLVGAPGVGKTLLVHKATVDCGIKLVSTNGTDVFGPHAGESEENLRRVFNK 299 Query: 183 A---DKNSPAIIFIDELDAIAPKREKTHGEVERRIVSQLLTLMDGMKKSSHVIVMAATNR 353 A + P ++FIDELDA+ PKR + E E RIV+QLLTLMDG++ VIV+ ATNR Sbjct: 300 ARYASRFGPCVLFIDELDALCPKRGSSGNEEENRIVAQLLTLMDGLESRGRVIVIGATNR 359 Query: 354 PNSIDPALRRFGRFDREIDIGIPDATGRLEILRIHTKNMKLGDDVDLXQIAAESHGHVGA 533 PN++DPALRR GRFDRE+ IG+P A RL+ILR H K + L DVDL +A + G+VGA Sbjct: 360 PNALDPALRRPGRFDREVVIGVPSAGQRLDILRAHCKPINLSVDVDLTHLAEITVGYVGA 419 Query: 534 DLASLCSEAALQQIREKM 587 DLASLC +AA ++ + Sbjct: 420 DLASLCQQAAFAALKRSL 437 Score = 79.4 bits (187), Expect = 3e-15 Identities = 41/109 (37%), Positives = 67/109 (61%) Frame = +3 Query: 3 IGVKPPRGILMYGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEE 182 +G++ PRG+L+YGPPG KT + RA A+ T F ++ ++ S G++E LR E Sbjct: 513 MGLRRPRGVLLYGPPGCCKTTLVRAAASSTHCTFMSLSCAQLFSSYVGDAERTLR----E 568 Query: 183 ADKNSPAIIFIDELDAIAPKREKTHGEVERRIVSQLLTLMDGMKKSSHV 329 P ++F+DELD++A KR G +E R+++ LL MDG+ S+++ Sbjct: 569 LVLQLPLLLFLDELDSLAGKRGNNLG-METRLLATLLNEMDGVGVSANI 616 Score = 74.5 bits (175), Expect = 8e-14 Identities = 40/77 (51%), Positives = 50/77 (64%) Frame = +3 Query: 327 VIVMAATNRPNSIDPALRRFGRFDREIDIGIPDATGRLEILRIHTKNMKLGDDVDLXQIA 506 +I++AATNRP +ID AL R GR D I + PD RLEILR+HT+ L DVDL IA Sbjct: 699 LILVAATNRPEAIDGALLRPGRIDCMIYVPPPDMKARLEILRVHTRFSPLAPDVDLSVIA 758 Query: 507 AESHGHVGADLASLCSE 557 + + GADL +LC E Sbjct: 759 EGTELYSGADLENLCRE 775 >SB_48561| Best HMM Match : AAA (HMM E-Value=0) Length = 2021 Score = 177 bits (430), Expect = 1e-44 Identities = 90/198 (45%), Positives = 123/198 (62%), Gaps = 6/198 (3%) Frame = +3 Query: 9 VKPPRGILMYGPPGTGKTLIARAVANETG-----AFFFLINGPEIMSKLAGESESNLRKA 173 + PPRG+L +GPPGTGKTL+ARA+ANE FF+ G + +SK GESE LR Sbjct: 915 ITPPRGVLFFGPPGTGKTLVARALANECSQGDKKVSFFMRKGADCLSKWVGESERQLRLL 974 Query: 174 FEEADKNSPAIIFIDELDAIAPKREKTHGEVERRIVSQLLTLMDGMKKSSHVIVMAATNR 353 F++A P+IIF DE+D +AP R ++ IVS LL LMDG+ V+++ ATNR Sbjct: 975 FDQAYAMRPSIIFFDEIDGLAPVRSSRQDQIHSSIVSTLLALMDGLDSRGEVVIIGATNR 1034 Query: 354 PNSIDPALRRFGRFDREIDIGIPDATGRLEILRIHTKNMKLG-DDVDLXQIAAESHGHVG 530 ++IDPALRR GRFDRE +PD R IL IHT+ + + ++A G+ G Sbjct: 1035 IDAIDPALRRPGRFDREFQFALPDRDARRSILSIHTREWEPRLSQRFISELADYCVGYCG 1094 Query: 531 ADLASLCSEAALQQIREK 584 AD+ +LC+EAAL +R + Sbjct: 1095 ADIKALCTEAALCALRRR 1112 >SB_45627| Best HMM Match : AAA (HMM E-Value=0) Length = 628 Score = 173 bits (422), Expect = 1e-43 Identities = 105/173 (60%), Positives = 116/173 (67%), Gaps = 5/173 (2%) Frame = +3 Query: 246 EKTHGEVERRIVSQLLTLMDGMKKSSHVIVMAATNRPNSIDPALRRFGRFDREIDIGIPD 425 ++THGEVERRIVSQLLTLMDG+K+ SHVIVMAATNRPNS+D ALRRFGRFDRE+DIGIPD Sbjct: 171 KETHGEVERRIVSQLLTLMDGLKQRSHVIVMAATNRPNSVDVALRRFGRFDREVDIGIPD 230 Query: 426 ATGRLEILRIHTKNMKLGDDVDLXQIAAESHGHVGADLASLCSEAALQQIREKMDLIDLE 605 ATGRLEILRIHTKNMKLGDDVDL Q IREKMDLIDLE Sbjct: 231 ATGRLEILRIHTKNMKLGDDVDLEQ------------------------IREKMDLIDLE 266 Query: 606 DDQIDARGSQFSGCLHG*LPVRNDEIVXVGVT*DSG-----GEVPNVTWTDIG 749 D+ IDA L +D +GV+ S EVPNV+W DIG Sbjct: 267 DETIDAE------VLDSLAVSMDDFRYAMGVSNPSALRETVVEVPNVSWDDIG 313 Score = 158 bits (384), Expect = 4e-39 Identities = 87/209 (41%), Positives = 124/209 (59%), Gaps = 4/209 (1%) Frame = +3 Query: 6 GVKPPRGILMYGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEA 185 G+ P +G+L YGPPG GKTL+A+A+ANE A F I GPE+++ GESE+N+R F++A Sbjct: 340 GMTPSKGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELLTMWFGESEANVRDVFDKA 399 Query: 186 DKNSPAIIFIDELDAIAPKREKTHGE---VERRIVSQLLTLMDGMKKSSHVIVMAATNRP 356 +P ++F DELD+IA R G+ R+++Q+LT MDGM +V ++ ATNRP Sbjct: 400 RSAAPCVLFFDELDSIAKSRGGNVGDGGGAADRVINQVLTEMDGMNVKKNVFIIGATNRP 459 Query: 357 NSIDPALRRFGRFDREIDIGIPDATGRLEILRIHTKNMKLGDDVDLXQIAAESHGHVGAD 536 + IDPA+ R GR D+ I I +PD DVDL +A +HG GAD Sbjct: 460 DIIDPAILRPGRLDQLIYIPLPD-----------------DGDVDLDYVAKVTHGFSGAD 502 Query: 537 LASLCSEAALQQIREKMDL-IDLEDDQID 620 L +C A IRE ++ I+ E ++D Sbjct: 503 LTEICQRACKLAIREAIETDINREKQRVD 531 Score = 46.4 bits (105), Expect = 2e-05 Identities = 27/41 (65%), Positives = 30/41 (73%) Frame = +1 Query: 589 ISLTSRTIRLTPEVLNSLAVSMDNFRYAMTKSSXSALRETV 711 I L TI EVL+SLAVSMD+FRYAM S+ SALRETV Sbjct: 263 IDLEDETI--DAEVLDSLAVSMDDFRYAMGVSNPSALRETV 301 >SB_7424| Best HMM Match : AAA (HMM E-Value=0) Length = 294 Score = 167 bits (407), Expect = 6e-42 Identities = 87/194 (44%), Positives = 124/194 (63%), Gaps = 6/194 (3%) Frame = +3 Query: 3 IGVKPPRGILMYGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEE 182 +G K P+G ++ GPPGTGKTL+A+AVA E G F I+G E + G + +R F + Sbjct: 76 LGAKIPKGAILSGPPGTGKTLLAKAVAGEAGVPFLSISGSEFLEMFVGVGPARVRDLFAQ 135 Query: 183 ADKNSPAIIFIDELDAIAPKREK---THGEVER-RIVSQLLTLMDGMKKSSHVIVMAATN 350 A KN+P IIFIDE+DA+ R + G ER ++QLL MDG S++V+V++ TN Sbjct: 136 ARKNAPCIIFIDEIDAVGRARGRGGQFGGHDERENTLNQLLVEMDGFSSSTNVVVLSGTN 195 Query: 351 RPNSIDPALRRFGRFDREIDIGIPDATGRLEILRIHTKNMKLGDDVD--LXQIAAESHGH 524 RP+ +DPAL R GRFDR+I + PD GR I ++H K +K D + ++AA + G Sbjct: 196 RPDVLDPALLRPGRFDRQIHLPAPDIKGRCSIFKVHLKPIKKNVDEEKLARKMAALTPGF 255 Query: 525 VGADLASLCSEAAL 566 GAD+A++C+EAAL Sbjct: 256 TGADIANVCNEAAL 269 >SB_55690| Best HMM Match : AAA (HMM E-Value=0) Length = 1031 Score = 165 bits (402), Expect = 3e-41 Identities = 85/199 (42%), Positives = 117/199 (58%) Frame = +3 Query: 24 GILMYGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEADKNSPA 203 G+L+YGPPGTGKTL+A VA E G F I GPE++SK G SE +R F A P Sbjct: 703 GLLLYGPPGTGKTLLAGVVAKECGLNFISIKGPELLSKYIGASEQAVRDMFTRAQSAKPC 762 Query: 204 IIFIDELDAIAPKREKTHGEVERRIVSQLLTLMDGMKKSSHVIVMAATNRPNSIDPALRR 383 I+F DE D++AP+R V R+V+QLLT +DG++ V ++AAT+RP+ IDPAL R Sbjct: 763 ILFFDEFDSLAPRRGHDSTGVTDRVVNQLLTQLDGVEGLKGVYILAATSRPDLIDPALLR 822 Query: 384 FGRFDREIDIGIPDATGRLEILRIHTKNMKLGDDVDLXQIAAESHGHVGADLASLCSEAA 563 GR D+ + IPD R E+ R + ++ L DD+DL I+ H GAD+ +L + Sbjct: 823 PGRLDKCVYCPIPDQGDRREVFRALSHDLPLADDIDLDSISDSCHHFTGADIKALLYNSQ 882 Query: 564 LQQIREKMDLIDLEDDQID 620 L+ I I L +D Sbjct: 883 LEAIHRTTSKIKLYGGVLD 901 >SB_49367| Best HMM Match : AAA (HMM E-Value=0) Length = 976 Score = 165 bits (401), Expect = 3e-41 Identities = 79/151 (52%), Positives = 107/151 (70%), Gaps = 2/151 (1%) Frame = +3 Query: 3 IGVKPPRGILMYGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEE 182 +GV P G L++GPPG GKTL+A A+A E F + EI+S ++GESE +R+ F Sbjct: 705 LGVTPTTGFLLHGPPGCGKTLLAHAIAGELEMPFLKLAATEIVSGVSGESEEKVRELFTS 764 Query: 183 ADKNSPAIIFIDELDAIAPKREKTHGEVERRIVSQLLTLMDGMKKS--SHVIVMAATNRP 356 A +P I+F+DE+DAI PKRE ++ERRIVSQLL+ MD + + +HV+V+ ATNRP Sbjct: 765 AVAQAPCILFLDEIDAITPKRENASKDMERRIVSQLLSCMDDLNNNPDAHVLVIGATNRP 824 Query: 357 NSIDPALRRFGRFDREIDIGIPDATGRLEIL 449 +S+DPALRR GRFDREI +GIPD + R I+ Sbjct: 825 DSLDPALRRAGRFDREISMGIPDESARARIV 855 >SB_40956| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 1086 Score = 156 bits (379), Expect = 2e-38 Identities = 81/189 (42%), Positives = 121/189 (64%), Gaps = 4/189 (2%) Frame = +3 Query: 24 GILMYGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEADKNSPA 203 G+L+YGPPGTGKTL+A+AVA E F + GPE+++ G+SE N+R+ F A SP Sbjct: 846 GVLLYGPPGTGKTLMAKAVATECSLNFLSVKGPELINMYVGQSEQNVREVFSRAQAASPC 905 Query: 204 IIFIDELDAIAPKREKT--HGEVERRIVSQLLTLMDGMKKSSHVIVMAATNRPNSIDPAL 377 +IF DELD++AP R ++ G V R+V+QLL +DG+ + V V+ ATNRP+ +DPAL Sbjct: 906 VIFFDELDSLAPNRGRSGDSGGVMDRVVAQLLAELDGLHSTCDVFVIGATNRPDLLDPAL 965 Query: 378 RRFGRFDREIDIGI-PDATGRLEILRIHTKNMKLGDDVDLXQIAAESHGHV-GADLASLC 551 R GRFD+ + +G+ D +L +L+ T+ D L + A + ++ GADL ++ Sbjct: 966 LRPGRFDKLLYLGVSEDHHAQLSVLKALTRKFTFSADFRLEEFANKLPLNLTGADLYAMA 1025 Query: 552 SEAALQQIR 578 S+A LQ +R Sbjct: 1026 SDALLQAMR 1034 >SB_3115| Best HMM Match : AAA (HMM E-Value=0) Length = 913 Score = 155 bits (377), Expect = 3e-38 Identities = 85/209 (40%), Positives = 123/209 (58%), Gaps = 7/209 (3%) Frame = +3 Query: 3 IGVKPPRGILMYGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEE 182 +G K P+G L+ GPPGTGKTL+A+AVA E F + G + + AG + +R F Sbjct: 153 LGAKIPKGALLVGPPGTGKTLLAKAVATEADVPFLSMAGSDFVEMFAGVGSARVRDLFTR 212 Query: 183 ADKNSPAIIFIDELDAIAPKREKT-----HGEVERRIVSQLLTLMDGMKKSSHVIVMAAT 347 A K +P I++IDE+DAI R+ + H E E + +QLL MDGM VI++A+T Sbjct: 213 ARKLAPCIVYIDEVDAIGRSRKSSRSMGGHNEQENTL-NQLLVEMDGMNTLDGVIMLAST 271 Query: 348 NRPNSIDPALRRFGRFDREIDIGIPDATGRLEILRIHTKNMKLGDDVD--LXQIAAESHG 521 NR + +D AL R GRFDR I I +P R+EI +H K + L +D ++A + G Sbjct: 272 NRADILDNALLRPGRFDRHIAIDLPTLPERMEIFEVHLKKLTLKRSIDQYTKRLAELTPG 331 Query: 522 HVGADLASLCSEAALQQIREKMDLIDLED 608 H GAD+A++C+EAAL R +D ++ Sbjct: 332 HSGADIANICNEAALHAARLNKKNVDTKN 360 >SB_33442| Best HMM Match : AAA (HMM E-Value=0) Length = 369 Score = 151 bits (366), Expect = 6e-37 Identities = 79/167 (47%), Positives = 110/167 (65%), Gaps = 3/167 (1%) Frame = +3 Query: 3 IGVKPPRGILMYGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEE 182 IG+ PPRG+L+YGPPG GKT++A+AVA+ T A F + G E + K GE +R F Sbjct: 193 IGIDPPRGVLLYGPPGCGKTMLAKAVAHHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRL 252 Query: 183 ADKNSPAIIFIDELDAIAPKR--EKTHGEVE-RRIVSQLLTLMDGMKKSSHVIVMAATNR 353 A +N+PAIIFIDE+DAIA KR +T + E +RI+ +LL MDG ++ +V V+ ATNR Sbjct: 253 AKENAPAIIFIDEIDAIATKRFDAQTGADREVQRILLELLNQMDGFDQNVNVKVIMATNR 312 Query: 354 PNSIDPALRRFGRFDREIDIGIPDATGRLEILRIHTKNMKLGDDVDL 494 +++DPAL R GR DR+I+ +PD + I T M L ++VDL Sbjct: 313 QDTLDPALLRPGRLDRKIEFPLPDRRQKRLIFSTITNKMNLSEEVDL 359 >SB_732| Best HMM Match : AAA (HMM E-Value=0) Length = 388 Score = 145 bits (352), Expect = 3e-35 Identities = 81/202 (40%), Positives = 127/202 (62%), Gaps = 16/202 (7%) Frame = +3 Query: 3 IGVKPPRGILMYGPPGTGKTLIARAVANETGAFF-FLINGPEIMSKLAGESESNLRKAFE 179 +G+K +GIL++GPPGTGKTL+AR + +I+GPE+++K GESE+N+RK F Sbjct: 177 MGLKHVKGILLFGPPGTGKTLMARQIGTMLNTREPKIISGPEVLNKFVGESEANIRKLFA 236 Query: 180 EA--------DKNSPAIIFIDELDAIAPKREK--THGE-VERRIVSQLLTLMDGMKKSSH 326 EA D ++ +I DE DA+ R T G V+ +V+QLL +DG+++ ++ Sbjct: 237 EAEEEQKRFGDNSALHLIIFDEFDAVCKSRYSYNTGGTGVQDSVVNQLLAKIDGVEQLNN 296 Query: 327 VIVMAATNRPNSIDPALRRFGRFDREIDIGIPDATGRLEILRIHTKNMK----LGDDVDL 494 V+++ TNR + ID AL R GR + +++IG+PD GR++IL+IHT M+ L DDVDL Sbjct: 297 VLLIGMTNRRDLIDDALLRPGRLEVQVEIGLPDEEGRVQILKIHTAKMRENKVLADDVDL 356 Query: 495 XQIAAESHGHVGADLASLCSEA 560 ++A ++ GA++ L A Sbjct: 357 AELATQTKNFTGAEIEGLVRAA 378 >SB_9909| Best HMM Match : AAA (HMM E-Value=0) Length = 400 Score = 135 bits (326), Expect = 4e-32 Identities = 64/144 (44%), Positives = 95/144 (65%), Gaps = 3/144 (2%) Frame = +3 Query: 3 IGVKPPRGILMYGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEE 182 +G++PP+G+L++GPPGTGKTL ARAVAN T A F + G E++ K GE +R+ FE Sbjct: 113 LGIEPPKGVLLFGPPGTGKTLCARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFEM 172 Query: 183 ADKNSPAIIFIDELDAIAPKR--EKTHGEVE-RRIVSQLLTLMDGMKKSSHVIVMAATNR 353 A I+F DE+DAI R + G+ E +R + +L+ +DG ++ V+ ATNR Sbjct: 173 ARTKKACIVFFDEIDAIGGARFDDGAGGDNEVQRTMLELINQLDGFDPRGNIKVLMATNR 232 Query: 354 PNSIDPALRRFGRFDREIDIGIPD 425 P+++DPAL R GR DR+++ G+PD Sbjct: 233 PDTLDPALMRPGRLDRKVEFGLPD 256 >SB_17703| Best HMM Match : Mito_carr (HMM E-Value=0) Length = 611 Score = 124 bits (299), Expect = 8e-29 Identities = 56/123 (45%), Positives = 83/123 (67%), Gaps = 1/123 (0%) Frame = +3 Query: 3 IGVKPPRGILMYGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEE 182 +G+ P GIL+ GPPG GKTL+A+A+ANE+G F + GPE+++ GESE +R+ F+ Sbjct: 12 LGLTHPPGILLAGPPGCGKTLLAKAIANESGINFISVKGPELLNMYVGESERAVRQVFQR 71 Query: 183 ADKNSPAIIFIDELDAIAPKRE-KTHGEVERRIVSQLLTLMDGMKKSSHVIVMAATNRPN 359 A ++P +IF DELD++ P+R + R+V+QLLT MDG++ HV +M ATN+P Sbjct: 72 ARNSAPCVIFFDELDSLCPRRSGSSESGSSVRVVNQLLTEMDGLQARKHVFIMGATNKPG 131 Query: 360 SID 368 D Sbjct: 132 IRD 134 >SB_56202| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 518 Score = 116 bits (278), Expect = 3e-26 Identities = 66/144 (45%), Positives = 91/144 (63%), Gaps = 7/144 (4%) Frame = +3 Query: 12 KPPRGILMYGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEADK 191 +P RG+LM GPPGTGKT++A+AVA E G FF ++ + SK GESE +R FE A Sbjct: 281 RPWRGVLMVGPPGTGKTMLAKAVATECGTTFFNVSSSTLTSKYRGESEKLVRILFEMARF 340 Query: 192 NSPAIIFIDELDAIAPKR-EKTHGEVERRIVSQLLTLMDGMKKSS------HVIVMAATN 350 +P+ IF+DE+D+I +R + E RR+ S+LL MDG+ SS V+V+AATN Sbjct: 341 YAPSTIFVDEIDSICSRRGSDSEHEASRRVKSELLVQMDGVGGSSDDGETKQVMVLAATN 400 Query: 351 RPNSIDPALRRFGRFDREIDIGIP 422 P +D ALRR R ++ I I +P Sbjct: 401 FPWDLDEALRR--RLEKRIYIPLP 422 >SB_28977| Best HMM Match : AAA (HMM E-Value=0) Length = 442 Score = 114 bits (274), Expect = 8e-26 Identities = 63/181 (34%), Positives = 109/181 (60%), Gaps = 3/181 (1%) Frame = +3 Query: 48 GTGKTLIARAVANETG-AFFFLINGPEIMSKLAGESESNLRKAFEEADKNSPAIIFIDEL 224 GTGK+ +A+AVA E + F ++ +++SK GESE +++ FE A +N P+IIFIDE+ Sbjct: 175 GTGKSYLAKAVATEANNSTFISVSSSDLVSKWLGESERLVKQLFELARENKPSIIFIDEV 234 Query: 225 DAIAPKREKTHGEVERRIVSQLLTLMDGM-KKSSHVIVMAATNRPNSIDPALRRFGRFDR 401 D++ R + E RRI ++ L M G+ + V+V+ ATN P ++D A+RR RF++ Sbjct: 235 DSLCGSRSENESESARRIKTEFLVQMQGVGVDNDQVLVLGATNIPWTLDSAIRR--RFEK 292 Query: 402 EIDIGIPDATGRLEILRIHTKNMK-LGDDVDLXQIAAESHGHVGADLASLCSEAALQQIR 578 I I +P+ R ++ +H K L ++ Q+ ++ G+ GAD++ + EA + +R Sbjct: 293 RIYIPLPEQAARSKMFELHLGGSKTLLGAQEIKQLGQKTDGYSGADISVVVREALMMPVR 352 Query: 579 E 581 + Sbjct: 353 K 353 >SB_5903| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 346 Score = 109 bits (262), Expect = 2e-24 Identities = 62/165 (37%), Positives = 92/165 (55%), Gaps = 3/165 (1%) Frame = +3 Query: 123 EIMSKLAGESESNLRKAFEEADKNSPAIIFIDELDAIAPKR---EKTHGEVERRIVSQLL 293 +I G+ +R AF A + +PAIIFIDELDAI KR EK +R + +LL Sbjct: 162 QIQEMFIGDGAKLVRDAFALAKEKAPAIIFIDELDAIGTKRFDSEKAGDREVQRTMLELL 221 Query: 294 TLMDGMKKSSHVIVMAATNRPNSIDPALRRFGRFDREIDIGIPDATGRLEILRIHTKNMK 473 +DG + V+AATNR + +DPAL R GR DR+I+ PD R IL+IH++ M Sbjct: 222 NQLDGFSSHHDIKVIAATNRVDILDPALLRSGRLDRKIEFPNPDQEARARILQIHSRKMN 281 Query: 474 LGDDVDLXQIAAESHGHVGADLASLCSEAALQQIREKMDLIDLED 608 + DV+ +++ + GA L ++C EA + +R + + ED Sbjct: 282 VSGDVNFDELSRCTDDFNGAMLKAVCVEAGMIALRREATEVCHED 326 >SB_3919| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 442 Score = 107 bits (258), Expect = 7e-24 Identities = 60/161 (37%), Positives = 99/161 (61%), Gaps = 17/161 (10%) Frame = +3 Query: 3 IGVKPPRGILMYGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKA--- 173 +G+ P+G+L+YGPPGTGKTL+ARAVA+ T F ++G E++ K GE +R+ Sbjct: 206 LGIDQPKGVLLYGPPGTGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGARMVRELFVM 265 Query: 174 -----------FEEADKNSPAIIFIDELDAIAPKREK--THGEVE-RRIVSQLLTLMDGM 311 F ++ +++P+IIF+DE+D+I R + + G+ E +R + +LL +DG Sbjct: 266 ARHGENLQAMYFVDSREHAPSIIFMDEIDSIGSSRLEGGSGGDSEVQRTMLELLNQLDGF 325 Query: 312 KKSSHVIVMAATNRPNSIDPALRRFGRFDREIDIGIPDATG 434 + + ++ V+ ATNR + +D AL R GR DR+I+ P+ G Sbjct: 326 EATKNIKVIMATNRIDILDSALLRPGRIDRKIEFPPPNEEG 366 >SB_19460| Best HMM Match : AAA (HMM E-Value=0) Length = 340 Score = 92.7 bits (220), Expect = 3e-19 Identities = 44/109 (40%), Positives = 72/109 (66%) Frame = +3 Query: 3 IGVKPPRGILMYGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEE 182 +G++ PRG+L+YGPPG KT + RA A+ T F ++ ++ S G++E LR+ F + Sbjct: 42 MGLRRPRGVLLYGPPGCCKTTLVRAAASSTHCTFMSLSCAQLFSSYVGDAERTLRELFLK 101 Query: 183 ADKNSPAIIFIDELDAIAPKREKTHGEVERRIVSQLLTLMDGMKKSSHV 329 A +PAI+F+DELD++A KR G +E R+++ LL MDG+ S+++ Sbjct: 102 ARATAPAILFLDELDSLAGKRGNNLG-METRLLATLLNEMDGVGVSANI 149 Score = 74.5 bits (175), Expect = 8e-14 Identities = 40/77 (51%), Positives = 50/77 (64%) Frame = +3 Query: 327 VIVMAATNRPNSIDPALRRFGRFDREIDIGIPDATGRLEILRIHTKNMKLGDDVDLXQIA 506 +I++AATNRP +ID AL R GR D I + PD RLEILR+HT+ L DVDL IA Sbjct: 232 LILVAATNRPEAIDGALLRPGRIDCMIYVPPPDMKARLEILRVHTRFSPLAPDVDLSVIA 291 Query: 507 AESHGHVGADLASLCSE 557 + + GADL +LC E Sbjct: 292 EGTELYSGADLENLCRE 308 >SB_35704| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 256 Score = 80.6 bits (190), Expect = 1e-15 Identities = 41/98 (41%), Positives = 56/98 (57%), Gaps = 1/98 (1%) Frame = +3 Query: 3 IGVKPPRGILMYGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEE 182 +G K P G+L+ G PGTGKTL+A+AVA E G FF +G E G + +R F Sbjct: 159 LGGKLPTGVLLIGSPGTGKTLLAKAVAGEAGVPFFFCSGSEFDEMFVGVGAARVRNLFAA 218 Query: 183 ADKNSPAIIFIDELDAIAPKR-EKTHGEVERRIVSQLL 293 A +++P I+F+DELDAI R H ++QLL Sbjct: 219 AKEHAPCIVFVDELDAIGGSRVVHDHQPYSSMTLNQLL 256 >SB_33584| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 455 Score = 64.9 bits (151), Expect = 7e-11 Identities = 25/45 (55%), Positives = 37/45 (82%) Frame = +3 Query: 3 IGVKPPRGILMYGPPGTGKTLIARAVANETGAFFFLINGPEIMSK 137 +G+KPP+G+++YG PGTGKTL+A+AVAN+T A F + G E++ K Sbjct: 409 MGIKPPKGVILYGQPGTGKTLLAKAVANQTSATFLRVVGSELIQK 453 >SB_31892| Best HMM Match : AAA (HMM E-Value=6.2e-25) Length = 420 Score = 62.9 bits (146), Expect = 3e-10 Identities = 48/160 (30%), Positives = 79/160 (49%), Gaps = 7/160 (4%) Frame = +3 Query: 6 GVKPPRGILMYGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEA 185 G+ RG L+YGPPG GK+ +A+A E ++N + ++ L A Sbjct: 218 GIPYRRGYLLYGPPGCGKSSFIQALAGELDYSICVMNLSD-----RSLTDDRLNHLMSVA 272 Query: 186 DKNSPAIIFIDELDAIAPKREKTH------GEVERRIV-SQLLTLMDGMKKSSHVIVMAA 344 + S II ++++DA KR++T+ G + R+ S LL +DG+ S +V Sbjct: 273 PQQS--IILLEDIDAAFVKRDETNAANKGGGMYQNRVTFSGLLNTLDGVASSEERVVFMT 330 Query: 345 TNRPNSIDPALRRFGRFDREIDIGIPDATGRLEILRIHTK 464 TN +DPAL R GR D + +I D R +++R+ + Sbjct: 331 TNHLKRLDPALIRPGRVDFKQEI---DWASRSQLVRMFAR 367 >SB_33907| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 56 Score = 57.6 bits (133), Expect = 1e-08 Identities = 23/44 (52%), Positives = 34/44 (77%) Frame = +3 Query: 3 IGVKPPRGILMYGPPGTGKTLIARAVANETGAFFFLINGPEIMS 134 +G+ P GIL+ GPPG GKTL+A+A+ANE+G F + GPE+++ Sbjct: 12 LGLTHPPGILLAGPPGCGKTLLAKAIANESGINFISVKGPELLN 55 >SB_30385| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 131 Score = 57.2 bits (132), Expect = 1e-08 Identities = 25/61 (40%), Positives = 35/61 (57%) Frame = +3 Query: 3 IGVKPPRGILMYGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEE 182 +G+ P+GIL+ G PG GKTL+ + G NG ++ AGESE NLR+ F + Sbjct: 70 LGINGPKGILLVGAPGVGKTLLVHKATVDCGIKLVSTNGTDVFGPHAGESEENLRRVFNK 129 Query: 183 A 185 A Sbjct: 130 A 130 >SB_46732| Best HMM Match : AAA (HMM E-Value=0.044) Length = 430 Score = 56.8 bits (131), Expect = 2e-08 Identities = 26/78 (33%), Positives = 48/78 (61%), Gaps = 1/78 (1%) Frame = +3 Query: 21 RGILMYGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEADKNSP 200 R +L YGPPGTGKT+ A+++A +G + ++ G +++ + E + + K F+ A+ + Sbjct: 330 RNLLFYGPPGTGKTMFAKSLARHSGMDYAVMTGGDVV-PMGKEGVTAMHKVFDWAETSRR 388 Query: 201 AI-IFIDELDAIAPKREK 251 + +F+DE DA KR + Sbjct: 389 GVLLFVDEADAFLRKRSQ 406 >SB_6656| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 461 Score = 53.2 bits (122), Expect = 2e-07 Identities = 31/118 (26%), Positives = 55/118 (46%), Gaps = 3/118 (2%) Frame = +3 Query: 21 RGILMYGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGES--ESNLRKAFEEADKN 194 + +L+ GP G GK ++ + ETGA F + I K G++ L F+ A + Sbjct: 208 KSVLITGPRGVGKKMLVHCICTETGANLFDLTAANIAGKYPGKAGLAMLLHMVFKVARQL 267 Query: 195 SPAIIFIDELD-AIAPKREKTHGEVERRIVSQLLTLMDGMKKSSHVIVMAATNRPNSI 365 P+++FI + + K KT +R+ L L+ +K VI++ + +P I Sbjct: 268 QPSVVFIGDAERTFVKKVPKTDKSDPKRLKKDLPKLLKTLKPEDRVIIIGTSRQPFDI 325 >SB_32582| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 1151 Score = 40.3 bits (90), Expect = 0.002 Identities = 23/99 (23%), Positives = 47/99 (47%) Frame = +3 Query: 195 SPAIIFIDELDAIAPKREKTHGEVERRIVSQLLTLMDGMKKSSHVIVMAATNRPNSIDPA 374 +PA + ID ++ + K +T E + +S + +L+D S + + T+R N + + Sbjct: 195 TPAFLLIDNVEQLLGKETETEQETQNEFISLIKSLLDSPPAKSGSLKIILTSRANVEEQS 254 Query: 375 LRRFGRFDREIDIGIPDATGRLEILRIHTKNMKLGDDVD 491 LRR G ++ ++ + + I R K D++D Sbjct: 255 LRRSGFSEKVVEKWDTETSKSFMIERSRYPIQKAEDEMD 293 >SB_25516| Best HMM Match : AAA_2 (HMM E-Value=0) Length = 609 Score = 39.1 bits (87), Expect = 0.004 Identities = 26/75 (34%), Positives = 41/75 (54%), Gaps = 6/75 (8%) Frame = +3 Query: 27 ILMYGPPGTGKTLIARAVANETGAFFFLINGPEI-MSKLAGES-ESNLRKAFEEA----D 188 IL+ GP G+GKTL+A+ +A F + + + + GE ES + K +EA + Sbjct: 273 ILLLGPTGSGKTLLAQTIARCLDVPFAICDCTALTQAGYVGEDIESVIAKLLQEAGGNVE 332 Query: 189 KNSPAIIFIDELDAI 233 K I+F+DE+D I Sbjct: 333 KAQQGIVFLDEVDKI 347 >SB_3478| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 62 Score = 39.1 bits (87), Expect = 0.004 Identities = 18/50 (36%), Positives = 27/50 (54%) Frame = +3 Query: 390 RFDREIDIGIPDATGRLEILRIHTKNMKLGDDVDLXQIAAESHGHVGADL 539 R DR+I+ +PD + I IHT+ M L +DV+L + GAD+ Sbjct: 2 RIDRKIEFPMPDEKTKRRIFNIHTQRMTLAEDVNLEEFIMAKDDLSGADI 51 >SB_11032| Best HMM Match : AAA (HMM E-Value=3.5) Length = 111 Score = 38.3 bits (85), Expect = 0.007 Identities = 19/50 (38%), Positives = 28/50 (56%) Frame = +3 Query: 144 GESESNLRKAFEEADKNSPAIIFIDELDAIAPKREKTHGEVERRIVSQLL 293 GE E +R F A PA+IF+DE+D++ +R E RRI ++ L Sbjct: 2 GEGEKMVRAMFAVARCYLPAVIFMDEIDSLLTQRTDGEHEASRRIKTEFL 51 >SB_21493| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 306 Score = 33.5 bits (73), Expect = 0.19 Identities = 20/48 (41%), Positives = 26/48 (54%), Gaps = 2/48 (4%) Frame = +3 Query: 21 RGILMYGPPGTGKTLIARAVANETG--AFFFLINGPEIMSKLAGESES 158 R +L+ G PGTGKT IA +A G F I G EI S ++E+ Sbjct: 170 RAVLIAGQPGTGKTAIAMGMAQSLGPDTPFTSIAGSEIFSLEMSKTEA 217 >SB_26897| Best HMM Match : AAA (HMM E-Value=4.2e-12) Length = 230 Score = 32.7 bits (71), Expect = 0.33 Identities = 43/191 (22%), Positives = 80/191 (41%), Gaps = 15/191 (7%) Frame = +3 Query: 27 ILMYGPPGTGKTLIARAVANET------GAFFFLINGPEI--MSKLAGE--SESNLRKAF 176 +L YGPPGTGKT AVA + G+ +N + + + G+ S ++ R F Sbjct: 13 LLFYGPPGTGKTSTILAVAKQLYPDKQFGSMVLELNASDDRGIGIVRGDILSFASTRTIF 72 Query: 177 EEADKNSPAIIFIDELDAIAPKREKTHGEVERRIV--SQLLTLMDGMKKSSHVIVMAATN 350 + K ++ +DE DA+ + V + ++ + + + K + T Sbjct: 73 KSGFK----LVILDEADAMTQDAQNALRRVMEKFTENTRFCLICNYLTKIIPALQSRCTR 128 Query: 351 ---RPNSIDPALRRFGRFDREIDIGIPDATGRLEILRIHTKNMKLGDDVDLXQIAAESHG 521 P S+D L R + + D GR +LR+ +M+ +++ Q + ++ Sbjct: 129 FRFGPLSVDQMLPRLEHVIESERVNVTD-DGRKSLLRLAQGDMR--KVLNILQSTSMAYS 185 Query: 522 HVGADLASLCS 554 V D LC+ Sbjct: 186 VVNEDHVYLCT 196 >SB_59437| Best HMM Match : AAA (HMM E-Value=7.4e-08) Length = 568 Score = 32.7 bits (71), Expect = 0.33 Identities = 15/39 (38%), Positives = 20/39 (51%) Frame = +3 Query: 21 RGILMYGPPGTGKTLIARAVANETGAFFFLINGPEIMSK 137 + L+ GPPG GKT A V E G + +N + SK Sbjct: 272 KAALLSGPPGVGKTTTATLVCQELGYSYVEMNASDARSK 310 >SB_54124| Best HMM Match : AAA (HMM E-Value=7.8e-08) Length = 251 Score = 32.3 bits (70), Expect = 0.43 Identities = 23/85 (27%), Positives = 43/85 (50%), Gaps = 7/85 (8%) Frame = +3 Query: 27 ILMYGPPGTGKTLIARAVA---NETGAF----FFLINGPEIMSKLAGESESNLRKAFEEA 185 ++ G PGTGKT +AR +A +E G + ++ + GE+ + + A + A Sbjct: 16 VMFVGNPGTGKTTMARMMAGILHEAGVIKRNKVIEVQRTALVGRYIGETGTKTKGAIDRA 75 Query: 186 DKNSPAIIFIDELDAIAPKREKTHG 260 K S ++ IDE ++ + +K +G Sbjct: 76 -KGS--VLLIDEAYRLSSESDKNYG 97 >SB_43853| Best HMM Match : AAA_5 (HMM E-Value=0) Length = 2065 Score = 32.3 bits (70), Expect = 0.43 Identities = 15/33 (45%), Positives = 19/33 (57%) Frame = +3 Query: 18 PRGILMYGPPGTGKTLIARAVANETGAFFFLIN 116 PR IL+ G PG GKT + A+A +G IN Sbjct: 1617 PRPILLEGSPGVGKTSLVSAIAKASGHELVRIN 1649 Score = 28.7 bits (61), Expect = 5.3 Identities = 17/49 (34%), Positives = 24/49 (48%) Frame = +3 Query: 3 IGVKPPRGILMYGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGE 149 + V G+L+ GP G+GKT + VA+ G PEIM G+ Sbjct: 113 LAVAAGSGVLLEGPVGSGKTCLVEHVASMCGR----STPPEIMKVQLGD 157 >SB_380| Best HMM Match : AAA (HMM E-Value=0.14) Length = 508 Score = 31.5 bits (68), Expect = 0.76 Identities = 13/29 (44%), Positives = 18/29 (62%) Frame = +3 Query: 15 PPRGILMYGPPGTGKTLIARAVANETGAF 101 PP +++ GP G GKTL R +A + G F Sbjct: 118 PPIRLMIVGPKGAGKTLHGRELARKLGLF 146 >SB_35973| Best HMM Match : zf-CCHC (HMM E-Value=0.0026) Length = 779 Score = 31.1 bits (67), Expect = 1.00 Identities = 9/16 (56%), Positives = 14/16 (87%) Frame = +3 Query: 3 IGVKPPRGILMYGPPG 50 +G+ PP+G L++GPPG Sbjct: 164 VGIAPPKGCLLFGPPG 179 >SB_379| Best HMM Match : ADK (HMM E-Value=3.2e-05) Length = 991 Score = 31.1 bits (67), Expect = 1.00 Identities = 12/29 (41%), Positives = 19/29 (65%) Frame = +3 Query: 12 KPPRGILMYGPPGTGKTLIARAVANETGA 98 +PP + + GPP +GKTL+A+ +A A Sbjct: 317 RPPCKVCVLGPPHSGKTLVAKQLAERYNA 345 >SB_58910| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 177 Score = 30.3 bits (65), Expect = 1.7 Identities = 15/40 (37%), Positives = 22/40 (55%) Frame = +3 Query: 489 DLXQIAAESHGHVGADLASLCSEAALQQIREKMDLIDLED 608 D + S G GADL ++C+EA + IR + D + ED Sbjct: 115 DYEAVVKLSDGFNGADLRNVCTEAGMFAIRGERDYVIEED 154 >SB_34154| Best HMM Match : UvrD-helicase (HMM E-Value=0.064) Length = 1064 Score = 30.3 bits (65), Expect = 1.7 Identities = 11/20 (55%), Positives = 14/20 (70%) Frame = +3 Query: 6 GVKPPRGILMYGPPGTGKTL 65 G P L++GPPGTGKT+ Sbjct: 547 GTSRPHPYLIFGPPGTGKTI 566 >SB_58663| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 1008 Score = 29.9 bits (64), Expect = 2.3 Identities = 27/128 (21%), Positives = 52/128 (40%) Frame = +3 Query: 300 MDGMKKSSHVIVMAATNRPNSIDPALRRFGRFDREIDIGIPDATGRLEILRIHTKNMKLG 479 ++GM K + + ++ S+D + +GR RE+ ++L+I + K+ Sbjct: 105 IEGMTKINEELKAKLCSQKQSLDEVTQNYGRLQREM------CATEDKLLQITRERNKIE 158 Query: 480 DDVDLXQIAAESHGHVGADLASLCSEAALQQIREKMDLIDLEDDQIDARGSQFSGCLHG* 659 + + Q E A+ + ++E DL++ E D A+ + G Sbjct: 159 EQLLAEQQGGEERAARQAEEMDHIKADHAKAMQEATDLLNRERDAFKAQSLELERACQG- 217 Query: 660 LPVRNDEI 683 L V DEI Sbjct: 218 LKVAGDEI 225 >SB_8371| Best HMM Match : Vicilin_N (HMM E-Value=0.11) Length = 323 Score = 29.9 bits (64), Expect = 2.3 Identities = 18/55 (32%), Positives = 27/55 (49%), Gaps = 1/55 (1%) Frame = -1 Query: 675 HCVPEVIHGDSQRIENLWRQSDRPRGQ*DPSSHESAA-RLPPSTETRDQRPRDRE 514 H + + QRIE L + D RG+ + +S E RLP STE +++E Sbjct: 218 HQLSHKVQRQQQRIEELTCELDLARGELEKNSMEEVTDRLPQSTEIHQLLDKNQE 272 >SB_57268| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 912 Score = 29.5 bits (63), Expect = 3.0 Identities = 18/54 (33%), Positives = 30/54 (55%), Gaps = 5/54 (9%) Frame = +3 Query: 342 ATNRPNSIDPALRRFGRFDREIDIGIP----DATGRLEIL-RIHTKNMKLGDDV 488 +T R N +DP +RR R + +I IP T + ++L +IHTK +G+ + Sbjct: 348 STKRKNPMDPVIRRRKRRGQGGEISIPCEPDKKTLKAQLLQKIHTKEYSIGERI 401 >SB_51808| Best HMM Match : OmpA (HMM E-Value=0.72) Length = 516 Score = 29.5 bits (63), Expect = 3.0 Identities = 18/54 (33%), Positives = 30/54 (55%), Gaps = 5/54 (9%) Frame = +3 Query: 342 ATNRPNSIDPALRRFGRFDREIDIGIP----DATGRLEIL-RIHTKNMKLGDDV 488 +T R N +DP +RR R + +I IP T + ++L +IHTK +G+ + Sbjct: 355 STKRKNPMDPVIRRRKRRGQGGEISIPCEPDKKTLKAQLLQKIHTKEYSIGERI 408 >SB_46519| Best HMM Match : DUF720 (HMM E-Value=0.49) Length = 1205 Score = 29.5 bits (63), Expect = 3.0 Identities = 18/54 (33%), Positives = 30/54 (55%), Gaps = 5/54 (9%) Frame = +3 Query: 342 ATNRPNSIDPALRRFGRFDREIDIGIP----DATGRLEIL-RIHTKNMKLGDDV 488 +T R N +DP +RR R + +I IP T + ++L +IHTK +G+ + Sbjct: 273 STKRKNPMDPVIRRRKRRGQGGEISIPCEPDKKTLKAQLLQKIHTKEYSIGERI 326 >SB_44158| Best HMM Match : OmpA (HMM E-Value=0.72) Length = 406 Score = 29.5 bits (63), Expect = 3.0 Identities = 18/54 (33%), Positives = 30/54 (55%), Gaps = 5/54 (9%) Frame = +3 Query: 342 ATNRPNSIDPALRRFGRFDREIDIGIP----DATGRLEIL-RIHTKNMKLGDDV 488 +T R N +DP +RR R + +I IP T + ++L +IHTK +G+ + Sbjct: 349 STKRKNPMDPVIRRRKRRGQGGEISIPCEPDKKTLKAQLLQKIHTKEYSIGERI 402 >SB_42682| Best HMM Match : OmpA (HMM E-Value=0.72) Length = 296 Score = 29.5 bits (63), Expect = 3.0 Identities = 18/54 (33%), Positives = 30/54 (55%), Gaps = 5/54 (9%) Frame = +3 Query: 342 ATNRPNSIDPALRRFGRFDREIDIGIP----DATGRLEIL-RIHTKNMKLGDDV 488 +T R N +DP +RR R + +I IP T + ++L +IHTK +G+ + Sbjct: 65 STKRKNPMDPVIRRRKRRGQGGEISIPCEPDKKTLKAQLLQKIHTKEYSIGERI 118 >SB_25694| Best HMM Match : RVT_1 (HMM E-Value=1.9e-22) Length = 1797 Score = 29.5 bits (63), Expect = 3.0 Identities = 18/54 (33%), Positives = 30/54 (55%), Gaps = 5/54 (9%) Frame = +3 Query: 342 ATNRPNSIDPALRRFGRFDREIDIGIP----DATGRLEIL-RIHTKNMKLGDDV 488 +T R N +DP +RR R + +I IP T + ++L +IHTK +G+ + Sbjct: 283 STKRKNPMDPVIRRRERRGQGGEISIPCEPDKKTLKAQLLQKIHTKEYSIGERI 336 >SB_10656| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 1931 Score = 29.5 bits (63), Expect = 3.0 Identities = 20/57 (35%), Positives = 29/57 (50%) Frame = +3 Query: 51 TGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEADKNSPAIIFIDE 221 +GKTLIARA NE A E+M K A E + KA + A ++ + ++E Sbjct: 1655 SGKTLIARAGENEGNA--------EVMGKTADELKEKATKAAQNATESKTKALKLEE 1703 >SB_4259| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 540 Score = 29.5 bits (63), Expect = 3.0 Identities = 18/54 (33%), Positives = 30/54 (55%), Gaps = 5/54 (9%) Frame = +3 Query: 342 ATNRPNSIDPALRRFGRFDREIDIGIP----DATGRLEIL-RIHTKNMKLGDDV 488 +T R N +DP +RR R + +I IP T + ++L +IHTK +G+ + Sbjct: 413 STKRKNPMDPVIRRRKRRGQGGEISIPCEPDKKTLKAQLLQKIHTKEYSIGERI 466 >SB_42068| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 3367 Score = 29.5 bits (63), Expect = 3.0 Identities = 12/30 (40%), Positives = 17/30 (56%) Frame = +3 Query: 36 YGPPGTGKTLIARAVANETGAFFFLINGPE 125 +GP GTGKT +A+ + G F + N E Sbjct: 1854 FGPAGTGKTESVKALGQQLGRFVLVFNCDE 1883 >SB_36695| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 412 Score = 29.5 bits (63), Expect = 3.0 Identities = 18/54 (33%), Positives = 30/54 (55%), Gaps = 5/54 (9%) Frame = +3 Query: 342 ATNRPNSIDPALRRFGRFDREIDIGIP----DATGRLEIL-RIHTKNMKLGDDV 488 +T R N +DP +RR R + +I IP T + ++L +IHTK +G+ + Sbjct: 355 STKRKNPMDPVIRRRKRRGQGGEISIPCEPDKKTLKAQLLQKIHTKEYSIGERI 408 >SB_19755| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 621 Score = 29.5 bits (63), Expect = 3.0 Identities = 18/54 (33%), Positives = 30/54 (55%), Gaps = 5/54 (9%) Frame = +3 Query: 342 ATNRPNSIDPALRRFGRFDREIDIGIP----DATGRLEIL-RIHTKNMKLGDDV 488 +T R N +DP +RR R + +I IP T + ++L +IHTK +G+ + Sbjct: 283 STKRKNPMDPVIRRRKRRGQGGEISIPCEPDKKTLKAQLLQKIHTKEYSIGERI 336 >SB_16760| Best HMM Match : OmpA (HMM E-Value=0.72) Length = 933 Score = 29.5 bits (63), Expect = 3.0 Identities = 18/54 (33%), Positives = 30/54 (55%), Gaps = 5/54 (9%) Frame = +3 Query: 342 ATNRPNSIDPALRRFGRFDREIDIGIP----DATGRLEIL-RIHTKNMKLGDDV 488 +T R N +DP +RR R + +I IP T + ++L +IHTK +G+ + Sbjct: 355 STKRKNPMDPVIRRRKRRGQGGEISIPCEPDKKTLKAQLLQKIHTKEYSIGERI 408 >SB_15796| Best HMM Match : RVT_1 (HMM E-Value=0.00082) Length = 1304 Score = 29.5 bits (63), Expect = 3.0 Identities = 18/54 (33%), Positives = 30/54 (55%), Gaps = 5/54 (9%) Frame = +3 Query: 342 ATNRPNSIDPALRRFGRFDREIDIGIP----DATGRLEIL-RIHTKNMKLGDDV 488 +T R N +DP +RR R + +I IP T + ++L +IHTK +G+ + Sbjct: 702 STKRKNPMDPVIRRRERRGQGGEISIPCEPDKKTLKAQLLQKIHTKEYSIGERI 755 >SB_10418| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 477 Score = 29.5 bits (63), Expect = 3.0 Identities = 11/22 (50%), Positives = 14/22 (63%) Frame = +3 Query: 30 LMYGPPGTGKTLIARAVANETG 95 L+ GPPG GKT +A +A G Sbjct: 384 LLCGPPGLGKTTLAHVIAQHAG 405 >SB_23422| Best HMM Match : Propeptide_C1 (HMM E-Value=7.2) Length = 628 Score = 29.1 bits (62), Expect = 4.0 Identities = 11/20 (55%), Positives = 14/20 (70%) Frame = +3 Query: 6 GVKPPRGILMYGPPGTGKTL 65 G P L++GPPGTGKT+ Sbjct: 587 GQSRPTPYLLFGPPGTGKTV 606 >SB_27721| Best HMM Match : CRPA (HMM E-Value=2.4) Length = 161 Score = 28.3 bits (60), Expect = 7.0 Identities = 12/25 (48%), Positives = 19/25 (76%) Frame = +3 Query: 528 GADLASLCSEAALQQIREKMDLIDL 602 GADLA+L EA++ +RE+++L L Sbjct: 2 GADLAALVREASMAALRERINLTSL 26 >SB_16306| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 958 Score = 28.3 bits (60), Expect = 7.0 Identities = 16/46 (34%), Positives = 23/46 (50%), Gaps = 2/46 (4%) Frame = +3 Query: 9 VKPPRGILMYGPPGTGKTLIARAVANETG--AFFFLINGPEIMSKL 140 V+P + + GP G+GKT + +A A LING + KL Sbjct: 32 VRPGEMLALMGPSGSGKTTLLNVLAGRMAKDAGDVLINGKHMNKKL 77 >SB_13937| Best HMM Match : zf-CCCH (HMM E-Value=0.0017) Length = 1495 Score = 28.3 bits (60), Expect = 7.0 Identities = 11/28 (39%), Positives = 21/28 (75%), Gaps = 1/28 (3%) Frame = +3 Query: 9 VKPPR-GILMYGPPGTGKTLIARAVANE 89 ++P R I++ GPPG+GKT +A+ + ++ Sbjct: 1245 IRPDRIVIILRGPPGSGKTHVAKLIKDK 1272 >SB_3294| Best HMM Match : DUF755 (HMM E-Value=0.22) Length = 884 Score = 28.3 bits (60), Expect = 7.0 Identities = 16/54 (29%), Positives = 26/54 (48%) Frame = +3 Query: 474 LGDDVDLXQIAAESHGHVGADLASLCSEAALQQIREKMDLIDLEDDQIDARGSQ 635 L D +L AE H HVG + ++C A ++ ++DL A+GS+ Sbjct: 678 LPSDENLASTGAE-HIHVGREQPAICGTAPTNGAQQSQGILDLNHVIKKAKGSE 730 >SB_38518| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 1399 Score = 27.9 bits (59), Expect = 9.3 Identities = 16/65 (24%), Positives = 28/65 (43%) Frame = +3 Query: 216 DELDAIAPKREKTHGEVERRIVSQLLTLMDGMKKSSHVIVMAATNRPNSIDPALRRFGRF 395 D+++ +PK K G +R +S+ + ++ R S D + G+F Sbjct: 1215 DDVEVTSPKTAKNTGTSQRPSLSRNSASSHSREDRGKESSRTSSTRRTSSDKYAKTTGKF 1274 Query: 396 DREID 410 REID Sbjct: 1275 SREID 1279 >SB_26376| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 1018 Score = 27.9 bits (59), Expect = 9.3 Identities = 22/66 (33%), Positives = 35/66 (53%), Gaps = 1/66 (1%) Frame = -2 Query: 692 DXDDFVIAYRKL-SMETARELRTSGVNLIVLEVNEIHLLTNLLQGCLRAQRREISAHVTV 516 D F+ R+L + ETA E TS ++ ++ EVN++ L N + L+ Q E+S +T Sbjct: 145 DMWQFININRRLGATETAIEKLTSLLDNMMAEVNDVKELANGIDD-LKKQISEVSLELTA 203 Query: 515 RLCCDL 498 C L Sbjct: 204 CTKCIL 209 >SB_10624| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 2193 Score = 27.9 bits (59), Expect = 9.3 Identities = 15/33 (45%), Positives = 20/33 (60%), Gaps = 1/33 (3%) Frame = +3 Query: 396 DREID-IGIPDATGRLEILRIHTKNMKLGDDVD 491 +RE+D G DA R E++ + TKN L DVD Sbjct: 111 NRELDGKGTSDADLRKEVIELRTKNKTLERDVD 143 >SB_8559| Best HMM Match : Dpy-30 (HMM E-Value=3.7e-11) Length = 806 Score = 27.9 bits (59), Expect = 9.3 Identities = 19/94 (20%), Positives = 43/94 (45%), Gaps = 2/94 (2%) Frame = +3 Query: 6 GVKPPRGILMYGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEA 185 G+ P R ++ GPP +GKTL+ + + I ++ + + + + +A ++ Sbjct: 355 GLLPVRACIL-GPPASGKTLVVKQLCTHYKLHHIRIQ--SVIDEAIEKLQQSAARADQDN 411 Query: 186 DKNSPAIIFIDE--LDAIAPKREKTHGEVERRIV 281 D D+ L+A+ +E+ +G E + + Sbjct: 412 DDEDDMKAQEDQELLEALLESKEQNNGRYEDQYI 445 Database: nematostella Posted date: Oct 22, 2007 1:22 PM Number of letters in database: 16,821,457 Number of sequences in database: 59,808 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 21,997,476 Number of Sequences: 59808 Number of extensions: 426076 Number of successful extensions: 1494 Number of sequences better than 10.0: 64 Number of HSP's better than 10.0 without gapping: 1309 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1464 length of database: 16,821,457 effective HSP length: 80 effective length of database: 12,036,817 effective search space used: 2034222073 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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