Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brP-0631
         (700 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_UPI00015B5D9C Cluster: PREDICTED: similar to conserved ...    36   0.72 
UniRef50_Q9VVJ6 Cluster: CG32179-PA; n=2; Sophophora|Rep: CG3217...    36   1.3  
UniRef50_Q5RGN7 Cluster: Novel EGF domain containing protein; n=...    35   1.7  
UniRef50_Q248I7 Cluster: Putative uncharacterized protein; n=1; ...    35   2.2  
UniRef50_Q01083 Cluster: Protein spitz precursor; n=8; melanogas...    35   2.2  
UniRef50_UPI000023E8F3 Cluster: hypothetical protein FG03200.1; ...    33   8.9  
UniRef50_Q0UN20 Cluster: Putative uncharacterized protein; n=1; ...    33   8.9  

>UniRef50_UPI00015B5D9C Cluster: PREDICTED: similar to conserved
           hypothetical protein, partial; n=1; Nasonia
           vitripennis|Rep: PREDICTED: similar to conserved
           hypothetical protein, partial - Nasonia vitripennis
          Length = 205

 Score = 36.3 bits (80), Expect = 0.72
 Identities = 11/21 (52%), Positives = 17/21 (80%)
 Frame = +1

Query: 568 NVTFPTFKCEPEYSQYYCLNG 630
           N+TF  + C P+Y+++YCLNG
Sbjct: 23  NITFHMYTCPPDYAEWYCLNG 43


>UniRef50_Q9VVJ6 Cluster: CG32179-PA; n=2; Sophophora|Rep:
           CG32179-PA - Drosophila melanogaster (Fruit fly)
          Length = 217

 Score = 35.5 bits (78), Expect = 1.3
 Identities = 13/20 (65%), Positives = 14/20 (70%)
 Frame = +1

Query: 568 NVTFPTFKCEPEYSQYYCLN 627
           NVTFP F C P Y  +YCLN
Sbjct: 54  NVTFPIFACPPTYVAWYCLN 73


>UniRef50_Q5RGN7 Cluster: Novel EGF domain containing protein; n=8;
            cellular organisms|Rep: Novel EGF domain containing
            protein - Danio rerio (Zebrafish) (Brachydanio rerio)
          Length = 8327

 Score = 35.1 bits (77), Expect = 1.7
 Identities = 20/56 (35%), Positives = 29/56 (51%), Gaps = 1/56 (1%)
 Frame = +2

Query: 29   CSVLSILSQLHFVYNFS-NGTLSVCVLNDRHTQFTKFEGVFDFSLSTCSSRDRCDI 193
            CS L   +  +  ++ S N T  VC LN+   Q  K EG+F +   TC + D CD+
Sbjct: 1508 CSCLDGFTAANSSFSVSINNTCEVCSLNETRYQ-CKCEGLFVWPNDTCHAYDACDV 1562



 Score = 33.5 bits (73), Expect = 5.1
 Identities = 16/38 (42%), Positives = 21/38 (55%)
 Frame = +2

Query: 80   NGTLSVCVLNDRHTQFTKFEGVFDFSLSTCSSRDRCDI 193
            N T  VC LN+   Q  K EG+F +   TC + D CD+
Sbjct: 968  NNTCEVCSLNETRYQ-CKCEGLFVWPNDTCHAYDACDV 1004



 Score = 32.7 bits (71), Expect = 8.9
 Identities = 20/56 (35%), Positives = 27/56 (48%), Gaps = 1/56 (1%)
 Frame = +2

Query: 29   CSVLSILSQLHFVYNFSNGT-LSVCVLNDRHTQFTKFEGVFDFSLSTCSSRDRCDI 193
            CS LS  +        SN    +VC LN+   Q  K EG+F +   TC + D CD+
Sbjct: 4775 CSCLSAFTVTDRNQRVSNSNPCNVCSLNETRYQ-CKCEGLFAWPNDTCHAYDACDV 4829


>UniRef50_Q248I7 Cluster: Putative uncharacterized protein; n=1;
           Tetrahymena thermophila SB210|Rep: Putative
           uncharacterized protein - Tetrahymena thermophila SB210
          Length = 834

 Score = 34.7 bits (76), Expect = 2.2
 Identities = 15/27 (55%), Positives = 20/27 (74%), Gaps = 1/27 (3%)
 Frame = +2

Query: 56  LHFVYNFSNGTLSVCVLNDRH-TQFTK 133
           L F YNFS G++S+CV+N+ H  QF K
Sbjct: 77  LQFRYNFSIGSISICVINNEHQKQFKK 103


>UniRef50_Q01083 Cluster: Protein spitz precursor; n=8; melanogaster
           subgroup|Rep: Protein spitz precursor - Drosophila
           melanogaster (Fruit fly)
          Length = 234

 Score = 34.7 bits (76), Expect = 2.2
 Identities = 11/20 (55%), Positives = 15/20 (75%)
 Frame = +1

Query: 568 NVTFPTFKCEPEYSQYYCLN 627
           N+TFPT+KC   +  +YCLN
Sbjct: 74  NITFPTYKCPETFDAWYCLN 93


>UniRef50_UPI000023E8F3 Cluster: hypothetical protein FG03200.1;
           n=1; Gibberella zeae PH-1|Rep: hypothetical protein
           FG03200.1 - Gibberella zeae PH-1
          Length = 713

 Score = 32.7 bits (71), Expect = 8.9
 Identities = 17/52 (32%), Positives = 30/52 (57%), Gaps = 1/52 (1%)
 Frame = -1

Query: 331 DRIRISNRNPLLASALTI-RPDMFPVFTFLHRRSLAHDGGAVSTGARDIASI 179
           D    +N + +L S  T+ RP+M PVF ++H  S A   G+ ++G  D+ ++
Sbjct: 479 DEFSCANLDVVLPSPDTLNRPEMLPVFVWIHGGSQAVTFGSAASGICDMTTV 530


>UniRef50_Q0UN20 Cluster: Putative uncharacterized protein; n=1;
           Phaeosphaeria nodorum|Rep: Putative uncharacterized
           protein - Phaeosphaeria nodorum (Septoria nodorum)
          Length = 672

 Score = 32.7 bits (71), Expect = 8.9
 Identities = 19/52 (36%), Positives = 26/52 (50%), Gaps = 3/52 (5%)
 Frame = -2

Query: 267 CFLCSLFYIDDHSLMTEARFLRAPEISHR---SLDEHVESEKSNTPSNFVNC 121
           CF  +  +++    MT+A     P +SH    SL+    SE S  PSNF NC
Sbjct: 250 CFSNTHGFMNSSDTMTQASSAPTPVLSHSNYTSLESAFTSEPSPGPSNFSNC 301


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 574,793,839
Number of Sequences: 1657284
Number of extensions: 10230519
Number of successful extensions: 26594
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 25838
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 26592
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 55371905986
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)