BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= brP-0630 (700 letters) Database: rice 37,544 sequences; 14,793,348 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value 01_06_0786 - 31992357-31992441,31992632-31992752,31993371-319934... 222 2e-58 06_03_0398 - 20379748-20379820,20379930-20380024,20380127-203802... 194 6e-50 02_02_0198 + 7705868-7706065,7706955-7707052,7707269-7707374,770... 105 3e-23 05_04_0355 - 20577189-20577275,20578001-20578129,20578252-205783... 30 2.0 03_06_0707 - 35655084-35655215,35656088-35656229,35656358-356564... 30 2.0 01_06_1021 - 33883594-33884583 29 3.5 10_01_0307 + 3382432-3382608,3382690-3382863,3383600-3383695,338... 29 4.7 03_05_0337 - 23272845-23273271,23273318-23273526,23275615-23276298 29 4.7 03_02_0195 - 6325907-6326173,6326996-6327149,6327245-6327336,632... 29 4.7 01_06_0332 + 28522797-28523536,28525035-28525067,28525956-285269... 29 4.7 01_06_0324 - 28485196-28486098 29 4.7 06_02_0148 - 12280794-12280962,12281102-12281210,12281283-122813... 28 6.2 02_01_0393 - 2863335-2864534 28 6.2 06_03_0700 + 23650275-23650299,23650381-23652350 28 8.2 02_01_0759 - 5628913-5630870,5631023-5631047 28 8.2 >01_06_0786 - 31992357-31992441,31992632-31992752,31993371-31993465, 31993595-31993716,31994217-31994354,31994564-31994727, 31994835-31994955,31995049-31995148,31995329-31995412, 31996082-31996143,31996246-31996317,31996447-31996506 Length = 407 Score = 222 bits (542), Expect = 2e-58 Identities = 107/215 (49%), Positives = 140/215 (65%), Gaps = 1/215 (0%) Frame = +3 Query: 15 ISSSTWWNNVXMGPPDVILXITEAYKKDTHPKKVNLGVGAYRDDEGKPFVLPSVRKAEEI 194 ++SS+ + + P D IL +T AY KD P KVNLGVGAYR +EGKP VL VR+AE++ Sbjct: 1 MASSSVFAGLAQAPEDPILGVTVAYNKDPSPVKVNLGVGAYRTEEGKPLVLNVVRRAEQM 60 Query: 195 L-HSRGLNHEYAPISGEATYTDAVAKLAFGEDSPVIKNRSNCTVQTLSGTGALRLGLEFI 371 L ++ EY PI+G A + AKL FG DSP I+ TVQ LSGTG+LR+G EF+ Sbjct: 61 LINNPSRVKEYLPITGLADFNKLSAKLIFGADSPAIQENRVATVQCLSGTGSLRVGGEFL 120 Query: 372 TKHYAKAKEIWLPTPTWGNHPQICNTLNLPHKKYRYFDPKTNGFDLQGALEDISKIPEGS 551 +HY + + I++P PTWGNHP++ L + YRY+DP T G D QG LED+ P G+ Sbjct: 121 ARHYHE-RTIYIPQPTWGNHPKVFTLAGLTVRSYRYYDPATRGLDFQGLLEDLGSAPSGA 179 Query: 552 IILLHACAHNPTGVDPKPSDWGTTFQGDQRKEIIP 656 I+LLHACAHNPTGVDP W Q + K ++P Sbjct: 180 IVLLHACAHNPTGVDPTLDQWEQIRQLMRSKALLP 214 Score = 39.5 bits (88), Expect = 0.003 Identities = 18/41 (43%), Positives = 27/41 (65%) Frame = +1 Query: 571 AHTTPPVLTPSPATGEQLSKVIKERKLFPFFDMAYQGFATG 693 AH P + P+ EQ+ ++++ + L PFFD AYQGFA+G Sbjct: 187 AHN-PTGVDPTLDQWEQIRQLMRSKALLPFFDSAYQGFASG 226 >06_03_0398 - 20379748-20379820,20379930-20380024,20380127-20380222, 20380342-20380501,20380844-20381016,20381102-20381206, 20381460-20381565,20381741-20381947,20383478-20383563, 20383655-20383846 Length = 430 Score = 194 bits (473), Expect = 6e-50 Identities = 91/199 (45%), Positives = 121/199 (60%) Frame = +3 Query: 18 SSSTWWNNVXMGPPDVILXITEAYKKDTHPKKVNLGVGAYRDDEGKPFVLPSVRKAEEIL 197 S ++W+ +V D IL +TEA+ D P KVN+GVGAYRDD GKP VL VR+AE + Sbjct: 28 SMASWFGHVEPAAKDPILGVTEAFLADPSPDKVNVGVGAYRDDSGKPVVLECVREAERRI 87 Query: 198 HSRGLNHEYAPISGEATYTDAVAKLAFGEDSPVIKNRSNCTVQTLSGTGALRLGLEFITK 377 + +N EY P+ G + KLA+GE+ IK++ VQ LSGTGA RL +F K Sbjct: 88 -AGSMNMEYLPMGGSIKMIEESLKLAYGENCEFIKDKRIAAVQALSGTGACRLFADF-QK 145 Query: 378 HYAKAKEIWLPTPTWGNHPQICNTLNLPHKKYRYFDPKTNGFDLQGALEDISKIPEGSII 557 + +I++PTPTW NH I +P K + Y+ P++ G D G ++DI P+GS Sbjct: 146 RFLPDSQIYIPTPTWANHHNIWRDAQVPQKTFTYYHPESRGLDFAGLMDDIKNAPDGSFF 205 Query: 558 LLHACAHNPTGVDPKPSDW 614 LLHACAHNPTGVDP W Sbjct: 206 LLHACAHNPTGVDPSEEQW 224 Score = 43.2 bits (97), Expect = 2e-04 Identities = 21/41 (51%), Positives = 26/41 (63%) Frame = +1 Query: 571 AHTTPPVLTPSPATGEQLSKVIKERKLFPFFDMAYQGFATG 693 AH P + PS ++S K +K FPFFDMAYQGFA+G Sbjct: 211 AHN-PTGVDPSEEQWREISHQFKVKKHFPFFDMAYQGFASG 250 >02_02_0198 + 7705868-7706065,7706955-7707052,7707269-7707374, 7707636-7707740,7707823-7707995,7708435-7708594, 7708683-7708778,7709349-7709417,7709434-7709528, 7709615-7709687 Length = 390 Score = 105 bits (253), Expect = 3e-23 Identities = 44/95 (46%), Positives = 58/95 (61%) Frame = +3 Query: 330 LSGTGALRLGLEFITKHYAKAKEIWLPTPTWGNHPQICNTLNLPHKKYRYFDPKTNGFDL 509 LSGTGA RL +F + + +I++PTPTW NH I +P + + Y+ P++ G D Sbjct: 68 LSGTGACRLFADF-QRRFLPNSQIYIPTPTWSNHHNIWRDAQVPQRTFTYYHPESRGLDF 126 Query: 510 QGALEDISKIPEGSIILLHACAHNPTGVDPKPSDW 614 G ++DI P GS LLHACAHNPTGVDP W Sbjct: 127 AGLMDDIKNAPNGSFFLLHACAHNPTGVDPTEEQW 161 Score = 39.1 bits (87), Expect = 0.003 Identities = 19/41 (46%), Positives = 25/41 (60%) Frame = +1 Query: 571 AHTTPPVLTPSPATGEQLSKVIKERKLFPFFDMAYQGFATG 693 AH P + P+ ++S K + FPFFDMAYQGFA+G Sbjct: 148 AHN-PTGVDPTEEQWREISYQFKIKNHFPFFDMAYQGFASG 187 Score = 30.3 bits (65), Expect = 1.5 Identities = 14/32 (43%), Positives = 19/32 (59%) Frame = +3 Query: 33 WNNVXMGPPDVILXITEAYKKDTHPKKVNLGV 128 + +V D IL +TEA+ D P KVN+GV Sbjct: 35 FGHVEPASKDPILGVTEAFLADPSPDKVNVGV 66 >05_04_0355 - 20577189-20577275,20578001-20578129,20578252-20578371, 20578505-20578741,20578983-20579258,20579375-20579508, 20580006-20581632 Length = 869 Score = 29.9 bits (64), Expect = 2.0 Identities = 16/56 (28%), Positives = 27/56 (48%) Frame = +1 Query: 448 PSTCRTRNTVTSIPRPMVSICREHSRIYQKFPKVPLFCCTRAHTTPPVLTPSPATG 615 P+ R+R + P P V + +HSR+ +F L + P+ +P+PA G Sbjct: 96 PNPSRSRTAAAAPPPPHVPLHADHSRLLSRFRHAVL-----PESASPLHSPAPAAG 146 >03_06_0707 - 35655084-35655215,35656088-35656229,35656358-35656485, 35656852-35656944,35657183-35657252,35657324-35657445, 35658143-35658265,35659453-35659710,35659995-35660074, 35660244-35660389,35660773-35660906,35661001-35661137, 35663013-35663135,35663521-35663590,35663925-35664050, 35664166-35664393 Length = 703 Score = 29.9 bits (64), Expect = 2.0 Identities = 12/27 (44%), Positives = 16/27 (59%) Frame = +2 Query: 506 FAGSTRGYIKNSRRFHYSVARVRTQPH 586 F G+T G IK+ RRFH+ A + H Sbjct: 330 FYGATEGLIKHRRRFHFHEAMLEIHDH 356 >01_06_1021 - 33883594-33884583 Length = 329 Score = 29.1 bits (62), Expect = 3.5 Identities = 17/48 (35%), Positives = 27/48 (56%), Gaps = 2/48 (4%) Frame = -1 Query: 313 LLLFLMTGLSSPKASLATASVYVASP--LMGAYSWLSPLL*RISSAFL 176 +LLF ++ LS+ A AS+Y A P + + + L P+L R+ FL Sbjct: 87 ILLFTLSLLSTAAAVFTVASLYAAKPASIASSLAALPPILPRLLRTFL 134 >10_01_0307 + 3382432-3382608,3382690-3382863,3383600-3383695, 3384640-3384709,3385878-3386002,3387128-3387268, 3387362-3387519,3387644-3387803,3390136-3390213, 3390326-3390385,3390473-3390528,3391886-3392090, 3394107-3394192,3394296-3394406,3394536-3394607, 3395453-3395538,3395730-3395878,3396107-3396250, 3396335-3396442,3396997-3397027,3397609-3397713, 3398283-3398407,3398807-3398950,3399073-3399177, 3400748-3400799,3401549-3401696,3401936-3402130, 3402404-3402647,3403152-3403259,3403887-3404034, 3405467-3405525,3405876-3405945,3407008-3407333, 3407666-3409204,3410526-3410733,3410870-3410906, 3411024-3411072,3411143-3411271 Length = 2025 Score = 28.7 bits (61), Expect = 4.7 Identities = 15/32 (46%), Positives = 20/32 (62%) Frame = +2 Query: 422 GKPPANLQHPQLAAQEIPLLRSQDQWFRFAGS 517 G PP + +L +E PL+RS+ WFRFA S Sbjct: 1765 GCPPIIKEEMKLN-EEPPLIRSKYGWFRFAAS 1795 >03_05_0337 - 23272845-23273271,23273318-23273526,23275615-23276298 Length = 439 Score = 28.7 bits (61), Expect = 4.7 Identities = 16/48 (33%), Positives = 19/48 (39%) Frame = +1 Query: 457 CRTRNTVTSIPRPMVSICREHSRIYQKFPKVPLFCCTRAHTTPPVLTP 600 C N TS PR CR + + VP+ TR PPV P Sbjct: 46 CYYNNYNTSQPRHFCRACRRYWTLGGSLRNVPIGGSTRKRPRPPVRRP 93 >03_02_0195 - 6325907-6326173,6326996-6327149,6327245-6327336, 6327433-6327534,6328406-6328528,6328635-6328683, 6328759-6328854,6328937-6329276,6329428-6329643, 6329759-6329864,6330144-6330192,6330519-6330792, 6330870-6330960,6331663-6331994,6332084-6332261, 6332815-6332872,6332956-6333089 Length = 886 Score = 28.7 bits (61), Expect = 4.7 Identities = 13/43 (30%), Positives = 26/43 (60%) Frame = -1 Query: 520 SAPCKSKPLVLGSK*RYFLCGKLRVLQICGWFPQVGVGSQISF 392 +A +++PL++G G+ RVL+ GW P G+G+ +++ Sbjct: 789 TALIENRPLLIGED---LTEGEARVLEEYGWVPNSGLGTMLNY 828 >01_06_0332 + 28522797-28523536,28525035-28525067,28525956-28526942, 28527153-28527282 Length = 629 Score = 28.7 bits (61), Expect = 4.7 Identities = 11/23 (47%), Positives = 13/23 (56%) Frame = +3 Query: 423 GNHPQICNTLNLPHKKYRYFDPK 491 GN Q C T +P KY+ DPK Sbjct: 186 GNWSQFCKTFEVPVVKYQQMDPK 208 >01_06_0324 - 28485196-28486098 Length = 300 Score = 28.7 bits (61), Expect = 4.7 Identities = 11/23 (47%), Positives = 13/23 (56%) Frame = +3 Query: 423 GNHPQICNTLNLPHKKYRYFDPK 491 GN Q C T +P KY+ DPK Sbjct: 189 GNWSQFCKTFEVPVVKYQQMDPK 211 >06_02_0148 - 12280794-12280962,12281102-12281210,12281283-12281385, 12281587-12281618,12281709-12281926,12282035-12282150, 12282428-12282683,12282912-12282999,12283393-12283468, 12283562-12283620,12285236-12285305,12285399-12285539 Length = 478 Score = 28.3 bits (60), Expect = 6.2 Identities = 16/47 (34%), Positives = 22/47 (46%) Frame = +3 Query: 60 DVILXITEAYKKDTHPKKVNLGVGAYRDDEGKPFVLPSVRKAEEILH 200 D+ + YK+D K LG+ AYR P +LPSV + H Sbjct: 80 DIAIDSYHRYKEDVGIMK-GLGLNAYRFSVSWPRILPSVEPFVTLFH 125 >02_01_0393 - 2863335-2864534 Length = 399 Score = 28.3 bits (60), Expect = 6.2 Identities = 15/39 (38%), Positives = 21/39 (53%), Gaps = 1/39 (2%) Frame = +1 Query: 532 QKFPKVPLFCC-TRAHTTPPVLTPSPATGEQLSKVIKER 645 QK P VP TRA+++ L PSPA + +K+R Sbjct: 110 QKQPPVPASAAATRAYSSSAALVPSPAPASATTPPMKQR 148 >06_03_0700 + 23650275-23650299,23650381-23652350 Length = 664 Score = 27.9 bits (59), Expect = 8.2 Identities = 12/31 (38%), Positives = 19/31 (61%) Frame = -3 Query: 644 LSLITLESCSPVAGLGVNTGGVVCARVQQNN 552 L ++T+E+C VA G+ G CA++Q N Sbjct: 265 LKVVTVEACPGVADEGLKAIGRCCAKLQSVN 295 >02_01_0759 - 5628913-5630870,5631023-5631047 Length = 660 Score = 27.9 bits (59), Expect = 8.2 Identities = 15/33 (45%), Positives = 20/33 (60%) Frame = -3 Query: 650 NFLSLITLESCSPVAGLGVNTGGVVCARVQQNN 552 N LSL T+ESCS V G+ G C+++Q N Sbjct: 259 NLLSL-TVESCSGVGNDGLRAIGRSCSKIQALN 290 Database: rice Posted date: Oct 4, 2007 10:57 AM Number of letters in database: 14,793,348 Number of sequences in database: 37,544 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 22,653,612 Number of Sequences: 37544 Number of extensions: 548041 Number of successful extensions: 1457 Number of sequences better than 10.0: 15 Number of HSP's better than 10.0 without gapping: 1389 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1452 length of database: 14,793,348 effective HSP length: 80 effective length of database: 11,789,828 effective search space used: 1792053856 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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