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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brP-0630
         (700 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

01_06_0786 - 31992357-31992441,31992632-31992752,31993371-319934...   222   2e-58
06_03_0398 - 20379748-20379820,20379930-20380024,20380127-203802...   194   6e-50
02_02_0198 + 7705868-7706065,7706955-7707052,7707269-7707374,770...   105   3e-23
05_04_0355 - 20577189-20577275,20578001-20578129,20578252-205783...    30   2.0  
03_06_0707 - 35655084-35655215,35656088-35656229,35656358-356564...    30   2.0  
01_06_1021 - 33883594-33884583                                         29   3.5  
10_01_0307 + 3382432-3382608,3382690-3382863,3383600-3383695,338...    29   4.7  
03_05_0337 - 23272845-23273271,23273318-23273526,23275615-23276298     29   4.7  
03_02_0195 - 6325907-6326173,6326996-6327149,6327245-6327336,632...    29   4.7  
01_06_0332 + 28522797-28523536,28525035-28525067,28525956-285269...    29   4.7  
01_06_0324 - 28485196-28486098                                         29   4.7  
06_02_0148 - 12280794-12280962,12281102-12281210,12281283-122813...    28   6.2  
02_01_0393 - 2863335-2864534                                           28   6.2  
06_03_0700 + 23650275-23650299,23650381-23652350                       28   8.2  
02_01_0759 - 5628913-5630870,5631023-5631047                           28   8.2  

>01_06_0786 -
           31992357-31992441,31992632-31992752,31993371-31993465,
           31993595-31993716,31994217-31994354,31994564-31994727,
           31994835-31994955,31995049-31995148,31995329-31995412,
           31996082-31996143,31996246-31996317,31996447-31996506
          Length = 407

 Score =  222 bits (542), Expect = 2e-58
 Identities = 107/215 (49%), Positives = 140/215 (65%), Gaps = 1/215 (0%)
 Frame = +3

Query: 15  ISSSTWWNNVXMGPPDVILXITEAYKKDTHPKKVNLGVGAYRDDEGKPFVLPSVRKAEEI 194
           ++SS+ +  +   P D IL +T AY KD  P KVNLGVGAYR +EGKP VL  VR+AE++
Sbjct: 1   MASSSVFAGLAQAPEDPILGVTVAYNKDPSPVKVNLGVGAYRTEEGKPLVLNVVRRAEQM 60

Query: 195 L-HSRGLNHEYAPISGEATYTDAVAKLAFGEDSPVIKNRSNCTVQTLSGTGALRLGLEFI 371
           L ++     EY PI+G A +    AKL FG DSP I+     TVQ LSGTG+LR+G EF+
Sbjct: 61  LINNPSRVKEYLPITGLADFNKLSAKLIFGADSPAIQENRVATVQCLSGTGSLRVGGEFL 120

Query: 372 TKHYAKAKEIWLPTPTWGNHPQICNTLNLPHKKYRYFDPKTNGFDLQGALEDISKIPEGS 551
            +HY + + I++P PTWGNHP++     L  + YRY+DP T G D QG LED+   P G+
Sbjct: 121 ARHYHE-RTIYIPQPTWGNHPKVFTLAGLTVRSYRYYDPATRGLDFQGLLEDLGSAPSGA 179

Query: 552 IILLHACAHNPTGVDPKPSDWGTTFQGDQRKEIIP 656
           I+LLHACAHNPTGVDP    W    Q  + K ++P
Sbjct: 180 IVLLHACAHNPTGVDPTLDQWEQIRQLMRSKALLP 214



 Score = 39.5 bits (88), Expect = 0.003
 Identities = 18/41 (43%), Positives = 27/41 (65%)
 Frame = +1

Query: 571 AHTTPPVLTPSPATGEQLSKVIKERKLFPFFDMAYQGFATG 693
           AH  P  + P+    EQ+ ++++ + L PFFD AYQGFA+G
Sbjct: 187 AHN-PTGVDPTLDQWEQIRQLMRSKALLPFFDSAYQGFASG 226


>06_03_0398 -
           20379748-20379820,20379930-20380024,20380127-20380222,
           20380342-20380501,20380844-20381016,20381102-20381206,
           20381460-20381565,20381741-20381947,20383478-20383563,
           20383655-20383846
          Length = 430

 Score =  194 bits (473), Expect = 6e-50
 Identities = 91/199 (45%), Positives = 121/199 (60%)
 Frame = +3

Query: 18  SSSTWWNNVXMGPPDVILXITEAYKKDTHPKKVNLGVGAYRDDEGKPFVLPSVRKAEEIL 197
           S ++W+ +V     D IL +TEA+  D  P KVN+GVGAYRDD GKP VL  VR+AE  +
Sbjct: 28  SMASWFGHVEPAAKDPILGVTEAFLADPSPDKVNVGVGAYRDDSGKPVVLECVREAERRI 87

Query: 198 HSRGLNHEYAPISGEATYTDAVAKLAFGEDSPVIKNRSNCTVQTLSGTGALRLGLEFITK 377
            +  +N EY P+ G     +   KLA+GE+   IK++    VQ LSGTGA RL  +F  K
Sbjct: 88  -AGSMNMEYLPMGGSIKMIEESLKLAYGENCEFIKDKRIAAVQALSGTGACRLFADF-QK 145

Query: 378 HYAKAKEIWLPTPTWGNHPQICNTLNLPHKKYRYFDPKTNGFDLQGALEDISKIPEGSII 557
            +    +I++PTPTW NH  I     +P K + Y+ P++ G D  G ++DI   P+GS  
Sbjct: 146 RFLPDSQIYIPTPTWANHHNIWRDAQVPQKTFTYYHPESRGLDFAGLMDDIKNAPDGSFF 205

Query: 558 LLHACAHNPTGVDPKPSDW 614
           LLHACAHNPTGVDP    W
Sbjct: 206 LLHACAHNPTGVDPSEEQW 224



 Score = 43.2 bits (97), Expect = 2e-04
 Identities = 21/41 (51%), Positives = 26/41 (63%)
 Frame = +1

Query: 571 AHTTPPVLTPSPATGEQLSKVIKERKLFPFFDMAYQGFATG 693
           AH  P  + PS     ++S   K +K FPFFDMAYQGFA+G
Sbjct: 211 AHN-PTGVDPSEEQWREISHQFKVKKHFPFFDMAYQGFASG 250


>02_02_0198 +
           7705868-7706065,7706955-7707052,7707269-7707374,
           7707636-7707740,7707823-7707995,7708435-7708594,
           7708683-7708778,7709349-7709417,7709434-7709528,
           7709615-7709687
          Length = 390

 Score =  105 bits (253), Expect = 3e-23
 Identities = 44/95 (46%), Positives = 58/95 (61%)
 Frame = +3

Query: 330 LSGTGALRLGLEFITKHYAKAKEIWLPTPTWGNHPQICNTLNLPHKKYRYFDPKTNGFDL 509
           LSGTGA RL  +F  + +    +I++PTPTW NH  I     +P + + Y+ P++ G D 
Sbjct: 68  LSGTGACRLFADF-QRRFLPNSQIYIPTPTWSNHHNIWRDAQVPQRTFTYYHPESRGLDF 126

Query: 510 QGALEDISKIPEGSIILLHACAHNPTGVDPKPSDW 614
            G ++DI   P GS  LLHACAHNPTGVDP    W
Sbjct: 127 AGLMDDIKNAPNGSFFLLHACAHNPTGVDPTEEQW 161



 Score = 39.1 bits (87), Expect = 0.003
 Identities = 19/41 (46%), Positives = 25/41 (60%)
 Frame = +1

Query: 571 AHTTPPVLTPSPATGEQLSKVIKERKLFPFFDMAYQGFATG 693
           AH  P  + P+     ++S   K +  FPFFDMAYQGFA+G
Sbjct: 148 AHN-PTGVDPTEEQWREISYQFKIKNHFPFFDMAYQGFASG 187



 Score = 30.3 bits (65), Expect = 1.5
 Identities = 14/32 (43%), Positives = 19/32 (59%)
 Frame = +3

Query: 33  WNNVXMGPPDVILXITEAYKKDTHPKKVNLGV 128
           + +V     D IL +TEA+  D  P KVN+GV
Sbjct: 35  FGHVEPASKDPILGVTEAFLADPSPDKVNVGV 66


>05_04_0355 -
           20577189-20577275,20578001-20578129,20578252-20578371,
           20578505-20578741,20578983-20579258,20579375-20579508,
           20580006-20581632
          Length = 869

 Score = 29.9 bits (64), Expect = 2.0
 Identities = 16/56 (28%), Positives = 27/56 (48%)
 Frame = +1

Query: 448 PSTCRTRNTVTSIPRPMVSICREHSRIYQKFPKVPLFCCTRAHTTPPVLTPSPATG 615
           P+  R+R    + P P V +  +HSR+  +F    L       +  P+ +P+PA G
Sbjct: 96  PNPSRSRTAAAAPPPPHVPLHADHSRLLSRFRHAVL-----PESASPLHSPAPAAG 146


>03_06_0707 -
           35655084-35655215,35656088-35656229,35656358-35656485,
           35656852-35656944,35657183-35657252,35657324-35657445,
           35658143-35658265,35659453-35659710,35659995-35660074,
           35660244-35660389,35660773-35660906,35661001-35661137,
           35663013-35663135,35663521-35663590,35663925-35664050,
           35664166-35664393
          Length = 703

 Score = 29.9 bits (64), Expect = 2.0
 Identities = 12/27 (44%), Positives = 16/27 (59%)
 Frame = +2

Query: 506 FAGSTRGYIKNSRRFHYSVARVRTQPH 586
           F G+T G IK+ RRFH+  A +    H
Sbjct: 330 FYGATEGLIKHRRRFHFHEAMLEIHDH 356


>01_06_1021 - 33883594-33884583
          Length = 329

 Score = 29.1 bits (62), Expect = 3.5
 Identities = 17/48 (35%), Positives = 27/48 (56%), Gaps = 2/48 (4%)
 Frame = -1

Query: 313 LLLFLMTGLSSPKASLATASVYVASP--LMGAYSWLSPLL*RISSAFL 176
           +LLF ++ LS+  A    AS+Y A P  +  + + L P+L R+   FL
Sbjct: 87  ILLFTLSLLSTAAAVFTVASLYAAKPASIASSLAALPPILPRLLRTFL 134


>10_01_0307 + 3382432-3382608,3382690-3382863,3383600-3383695,
            3384640-3384709,3385878-3386002,3387128-3387268,
            3387362-3387519,3387644-3387803,3390136-3390213,
            3390326-3390385,3390473-3390528,3391886-3392090,
            3394107-3394192,3394296-3394406,3394536-3394607,
            3395453-3395538,3395730-3395878,3396107-3396250,
            3396335-3396442,3396997-3397027,3397609-3397713,
            3398283-3398407,3398807-3398950,3399073-3399177,
            3400748-3400799,3401549-3401696,3401936-3402130,
            3402404-3402647,3403152-3403259,3403887-3404034,
            3405467-3405525,3405876-3405945,3407008-3407333,
            3407666-3409204,3410526-3410733,3410870-3410906,
            3411024-3411072,3411143-3411271
          Length = 2025

 Score = 28.7 bits (61), Expect = 4.7
 Identities = 15/32 (46%), Positives = 20/32 (62%)
 Frame = +2

Query: 422  GKPPANLQHPQLAAQEIPLLRSQDQWFRFAGS 517
            G PP   +  +L  +E PL+RS+  WFRFA S
Sbjct: 1765 GCPPIIKEEMKLN-EEPPLIRSKYGWFRFAAS 1795


>03_05_0337 - 23272845-23273271,23273318-23273526,23275615-23276298
          Length = 439

 Score = 28.7 bits (61), Expect = 4.7
 Identities = 16/48 (33%), Positives = 19/48 (39%)
 Frame = +1

Query: 457 CRTRNTVTSIPRPMVSICREHSRIYQKFPKVPLFCCTRAHTTPPVLTP 600
           C   N  TS PR     CR +  +      VP+   TR    PPV  P
Sbjct: 46  CYYNNYNTSQPRHFCRACRRYWTLGGSLRNVPIGGSTRKRPRPPVRRP 93


>03_02_0195 -
           6325907-6326173,6326996-6327149,6327245-6327336,
           6327433-6327534,6328406-6328528,6328635-6328683,
           6328759-6328854,6328937-6329276,6329428-6329643,
           6329759-6329864,6330144-6330192,6330519-6330792,
           6330870-6330960,6331663-6331994,6332084-6332261,
           6332815-6332872,6332956-6333089
          Length = 886

 Score = 28.7 bits (61), Expect = 4.7
 Identities = 13/43 (30%), Positives = 26/43 (60%)
 Frame = -1

Query: 520 SAPCKSKPLVLGSK*RYFLCGKLRVLQICGWFPQVGVGSQISF 392
           +A  +++PL++G        G+ RVL+  GW P  G+G+ +++
Sbjct: 789 TALIENRPLLIGED---LTEGEARVLEEYGWVPNSGLGTMLNY 828


>01_06_0332 +
           28522797-28523536,28525035-28525067,28525956-28526942,
           28527153-28527282
          Length = 629

 Score = 28.7 bits (61), Expect = 4.7
 Identities = 11/23 (47%), Positives = 13/23 (56%)
 Frame = +3

Query: 423 GNHPQICNTLNLPHKKYRYFDPK 491
           GN  Q C T  +P  KY+  DPK
Sbjct: 186 GNWSQFCKTFEVPVVKYQQMDPK 208


>01_06_0324 - 28485196-28486098
          Length = 300

 Score = 28.7 bits (61), Expect = 4.7
 Identities = 11/23 (47%), Positives = 13/23 (56%)
 Frame = +3

Query: 423 GNHPQICNTLNLPHKKYRYFDPK 491
           GN  Q C T  +P  KY+  DPK
Sbjct: 189 GNWSQFCKTFEVPVVKYQQMDPK 211


>06_02_0148 -
           12280794-12280962,12281102-12281210,12281283-12281385,
           12281587-12281618,12281709-12281926,12282035-12282150,
           12282428-12282683,12282912-12282999,12283393-12283468,
           12283562-12283620,12285236-12285305,12285399-12285539
          Length = 478

 Score = 28.3 bits (60), Expect = 6.2
 Identities = 16/47 (34%), Positives = 22/47 (46%)
 Frame = +3

Query: 60  DVILXITEAYKKDTHPKKVNLGVGAYRDDEGKPFVLPSVRKAEEILH 200
           D+ +     YK+D    K  LG+ AYR     P +LPSV     + H
Sbjct: 80  DIAIDSYHRYKEDVGIMK-GLGLNAYRFSVSWPRILPSVEPFVTLFH 125


>02_01_0393 - 2863335-2864534
          Length = 399

 Score = 28.3 bits (60), Expect = 6.2
 Identities = 15/39 (38%), Positives = 21/39 (53%), Gaps = 1/39 (2%)
 Frame = +1

Query: 532 QKFPKVPLFCC-TRAHTTPPVLTPSPATGEQLSKVIKER 645
           QK P VP     TRA+++   L PSPA     +  +K+R
Sbjct: 110 QKQPPVPASAAATRAYSSSAALVPSPAPASATTPPMKQR 148


>06_03_0700 + 23650275-23650299,23650381-23652350
          Length = 664

 Score = 27.9 bits (59), Expect = 8.2
 Identities = 12/31 (38%), Positives = 19/31 (61%)
 Frame = -3

Query: 644 LSLITLESCSPVAGLGVNTGGVVCARVQQNN 552
           L ++T+E+C  VA  G+   G  CA++Q  N
Sbjct: 265 LKVVTVEACPGVADEGLKAIGRCCAKLQSVN 295


>02_01_0759 - 5628913-5630870,5631023-5631047
          Length = 660

 Score = 27.9 bits (59), Expect = 8.2
 Identities = 15/33 (45%), Positives = 20/33 (60%)
 Frame = -3

Query: 650 NFLSLITLESCSPVAGLGVNTGGVVCARVQQNN 552
           N LSL T+ESCS V   G+   G  C+++Q  N
Sbjct: 259 NLLSL-TVESCSGVGNDGLRAIGRSCSKIQALN 290


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,653,612
Number of Sequences: 37544
Number of extensions: 548041
Number of successful extensions: 1457
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 1389
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1452
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1792053856
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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