Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brP-0630
         (700 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF510719-1|AAP47148.1|  591|Anopheles gambiae ammonium transport...    27   0.75 
AB090819-2|BAC57914.1| 1022|Anopheles gambiae reverse transcript...    26   0.99 
DQ370045-1|ABD18606.1|  285|Anopheles gambiae putative TIL domai...    24   5.3  

>AF510719-1|AAP47148.1|  591|Anopheles gambiae ammonium
           transport-like protein protein.
          Length = 591

 Score = 26.6 bits (56), Expect = 0.75
 Identities = 8/20 (40%), Positives = 12/20 (60%)
 Frame = -2

Query: 648 FPFFDHLGKLFPSRWAWGQH 589
           F FF+ +    P+ W WG+H
Sbjct: 164 FSFFNTIVYCIPAGWVWGEH 183


>AB090819-2|BAC57914.1| 1022|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1022

 Score = 26.2 bits (55), Expect = 0.99
 Identities = 12/39 (30%), Positives = 20/39 (51%)
 Frame = +3

Query: 573 AHNPTGVDPKPSDWGTTFQGDQRKEIIPVLRHGVSRFRH 689
           A  P  V+    +W TT  G   + +IP ++  ++R RH
Sbjct: 850 AERPYSVEAWQREWSTTTSGSWTRRLIPNIQPWITR-RH 887


>DQ370045-1|ABD18606.1|  285|Anopheles gambiae putative TIL domain
           protein protein.
          Length = 285

 Score = 23.8 bits (49), Expect = 5.3
 Identities = 14/38 (36%), Positives = 18/38 (47%), Gaps = 1/38 (2%)
 Frame = -1

Query: 526 SSSAPCKSK-PLVLGSK*RYFLCGKLRVLQICGWFPQV 416
           SS  P K   P+  G+K     CG+   LQ CG   Q+
Sbjct: 188 SSVRPSKGLIPVAPGAKCPITTCGRNEALQACGTCNQI 225


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 859,406
Number of Sequences: 2352
Number of extensions: 20827
Number of successful extensions: 61
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 61
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 61
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 71086350
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)