Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brP-0630
(700 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U39645-9|AAM51511.1| 297|Caenorhabditis elegans Hypothetical pr... 255 3e-68
U39645-8|AAA80361.1| 414|Caenorhabditis elegans Hypothetical pr... 255 3e-68
AF003140-10|AAD47121.2| 419|Caenorhabditis elegans Hypothetical... 237 7e-63
U58726-4|AAB00578.1| 408|Caenorhabditis elegans Hypothetical pr... 162 2e-40
U58726-3|AAB00577.1| 357|Caenorhabditis elegans Hypothetical pr... 88 7e-18
U46671-1|AAA85747.1| 364|Caenorhabditis elegans Hypothetical pr... 47 1e-05
U80846-5|AAP82647.1| 825|Caenorhabditis elegans Hypothetical pr... 38 0.009
U80846-4|AAC70889.1| 1032|Caenorhabditis elegans Hypothetical pr... 38 0.009
U80846-3|AAC70890.1| 2232|Caenorhabditis elegans Hypothetical pr... 38 0.009
U23486-8|AAC46779.3| 1025|Caenorhabditis elegans Nmda class glut... 30 1.4
AF318613-1|AAK01101.2| 1025|Caenorhabditis elegans NMDA-type ion... 30 1.4
U80453-9|AAT81206.1| 432|Caenorhabditis elegans Hypothetical pr... 29 2.4
U64835-5|AAG24196.1| 592|Caenorhabditis elegans Hypothetical pr... 29 3.2
Z70756-10|CAI46587.1| 228|Caenorhabditis elegans Hypothetical p... 27 9.8
U40948-1|AAA81727.1| 730|Caenorhabditis elegans Gliotactin (dro... 27 9.8
>U39645-9|AAM51511.1| 297|Caenorhabditis elegans Hypothetical
protein C14F11.1b protein.
Length = 297
Score = 255 bits (624), Expect = 3e-68
Identities = 118/200 (59%), Positives = 148/200 (74%)
Frame = +3
Query: 15 ISSSTWWNNVXMGPPDVILXITEAYKKDTHPKKVNLGVGAYRDDEGKPFVLPSVRKAEEI 194
+ +WW++V MGPPD IL +TEA+K D++PKK+NLGVGAYRDD+GKPFVLPSV++AE
Sbjct: 12 VRGKSWWSHVEMGPPDAILGVTEAFKADSNPKKINLGVGAYRDDQGKPFVLPSVKEAERQ 71
Query: 195 LHSRGLNHEYAPISGEATYTDAVAKLAFGEDSPVIKNRSNCTVQTLSGTGALRLGLEFIT 374
+ + L+ EYA I G +T A+LA GE+S VIKN+ T Q++SGTGALR+G EF++
Sbjct: 72 VIAANLDKEYAGIVGLPEFTKLSAQLALGENSDVIKNKRIFTTQSISGTGALRIGSEFLS 131
Query: 375 KHYAKAKEIWLPTPTWGNHPQICNTLNLPHKKYRYFDPKTNGFDLQGALEDISKIPEGSI 554
K YAK K I+ PTPTWGNH I + K+YRY+D T GFD GAL DI++IPEGS
Sbjct: 132 K-YAKTKVIYQPTPTWGNHVPIFKFAGVDVKQYRYYDKSTCGFDETGALADIAQIPEGST 190
Query: 555 ILLHACAHNPTGVDPKPSDW 614
ILLHACAHNPTGVDP W
Sbjct: 191 ILLHACAHNPTGVDPSRDQW 210
>U39645-8|AAA80361.1| 414|Caenorhabditis elegans Hypothetical
protein C14F11.1a protein.
Length = 414
Score = 255 bits (624), Expect = 3e-68
Identities = 118/200 (59%), Positives = 148/200 (74%)
Frame = +3
Query: 15 ISSSTWWNNVXMGPPDVILXITEAYKKDTHPKKVNLGVGAYRDDEGKPFVLPSVRKAEEI 194
+ +WW++V MGPPD IL +TEA+K D++PKK+NLGVGAYRDD+GKPFVLPSV++AE
Sbjct: 12 VRGKSWWSHVEMGPPDAILGVTEAFKADSNPKKINLGVGAYRDDQGKPFVLPSVKEAERQ 71
Query: 195 LHSRGLNHEYAPISGEATYTDAVAKLAFGEDSPVIKNRSNCTVQTLSGTGALRLGLEFIT 374
+ + L+ EYA I G +T A+LA GE+S VIKN+ T Q++SGTGALR+G EF++
Sbjct: 72 VIAANLDKEYAGIVGLPEFTKLSAQLALGENSDVIKNKRIFTTQSISGTGALRIGSEFLS 131
Query: 375 KHYAKAKEIWLPTPTWGNHPQICNTLNLPHKKYRYFDPKTNGFDLQGALEDISKIPEGSI 554
K YAK K I+ PTPTWGNH I + K+YRY+D T GFD GAL DI++IPEGS
Sbjct: 132 K-YAKTKVIYQPTPTWGNHVPIFKFAGVDVKQYRYYDKSTCGFDETGALADIAQIPEGST 190
Query: 555 ILLHACAHNPTGVDPKPSDW 614
ILLHACAHNPTGVDP W
Sbjct: 191 ILLHACAHNPTGVDPSRDQW 210
Score = 45.2 bits (102), Expect = 5e-05
Identities = 21/41 (51%), Positives = 29/41 (70%)
Frame = +1
Query: 571 AHTTPPVLTPSPATGEQLSKVIKERKLFPFFDMAYQGFATG 693
AH P + PS +++S ++K+R LF FFDMAYQGFA+G
Sbjct: 197 AHN-PTGVDPSRDQWKKISDIVKKRNLFVFFDMAYQGFASG 236
>AF003140-10|AAD47121.2| 419|Caenorhabditis elegans Hypothetical
protein C44E4.3 protein.
Length = 419
Score = 237 bits (579), Expect = 7e-63
Identities = 108/209 (51%), Positives = 150/209 (71%)
Frame = +3
Query: 30 WWNNVXMGPPDVILXITEAYKKDTHPKKVNLGVGAYRDDEGKPFVLPSVRKAEEILHSRG 209
W+ NV + P D IL +TEA+KKDT+P K+NLGVGAYRDD+GKPFVL +VR+AE+ +
Sbjct: 22 WFRNVPLAPADPILGVTEAFKKDTNPNKINLGVGAYRDDQGKPFVLRAVREAEQQIIDAK 81
Query: 210 LNHEYAPISGEATYTDAVAKLAFGEDSPVIKNRSNCTVQTLSGTGALRLGLEFITKHYAK 389
++ EY+ I+G + AKLAFG++S VI++ T Q++SGTGALR+G +F+ K +
Sbjct: 82 MDKEYSTITGVPEFAPLAAKLAFGDNSEVIRDGRVFTTQSISGTGALRIGGQFVEK-FIP 140
Query: 390 AKEIWLPTPTWGNHPQICNTLNLPHKKYRYFDPKTNGFDLQGALEDISKIPEGSIILLHA 569
+K ++ PTPTW NH + L + YRY++ +T GFD++GALEDISK+PEGS+ILLHA
Sbjct: 141 SKTLFYPTPTWANHLPVFRNSGLSIQPYRYYNQETLGFDVEGALEDISKMPEGSVILLHA 200
Query: 570 CAHNPTGVDPKPSDWGTTFQGDQRKEIIP 656
CAHNPTGVDP W Q + ++I+P
Sbjct: 201 CAHNPTGVDPTKEQWKKLSQVLKERKILP 229
Score = 50.4 bits (115), Expect = 1e-06
Identities = 23/41 (56%), Positives = 31/41 (75%)
Frame = +1
Query: 571 AHTTPPVLTPSPATGEQLSKVIKERKLFPFFDMAYQGFATG 693
AH P + P+ ++LS+V+KERK+ PFFDMAYQGFA+G
Sbjct: 202 AHN-PTGVDPTKEQWKKLSQVLKERKILPFFDMAYQGFASG 241
>U58726-4|AAB00578.1| 408|Caenorhabditis elegans Hypothetical
protein T01C8.5 protein.
Length = 408
Score = 162 bits (393), Expect = 2e-40
Identities = 79/210 (37%), Positives = 115/210 (54%), Gaps = 2/210 (0%)
Frame = +3
Query: 27 TWWNNVXMGPPDVILXITEAYKKDTHPKKVNLGVGAYRDDEGKPFVLPSVRKAE-EILHS 203
++++ + + PP + + Y +T P KVNL +GAYR +EG+P+VLP V + E EI +
Sbjct: 2 SFFDGIPVAPPIEVFHKNKMYLDETAPVKVNLTIGAYRTEEGQPWVLPVVHETEVEIAND 61
Query: 204 RGLNHEYAPISGEATYTDAVAKLAFGEDSPVIKNRSNCTVQTLSGTGALRLGLEFITKHY 383
LNHEY P+ G + A +L G +SP IK + VQ LSGTGALR G EF+
Sbjct: 62 TSLNHEYLPVLGHEGFRKAATELVLGAESPAIKEERSFGVQCLSGTGALRAGAEFLAS-V 120
Query: 384 AKAKEIWLPTPTWGNHPQICNTLNLPH-KKYRYFDPKTNGFDLQGALEDISKIPEGSIIL 560
K +++ PTWGNH + Y ++D ++ L D+ PE S+I+
Sbjct: 121 CNMKTVYVSNPTWGNHKLVFKKAGFTTVADYTFWDYDNKRVHIEKFLSDLESAPEKSVII 180
Query: 561 LHACAHNPTGVDPKPSDWGTTFQGDQRKEI 650
LH CAHNPTG+DP W + +RK +
Sbjct: 181 LHGCAHNPTGMDPTQEQWKLVAEVIKRKNL 210
Score = 41.1 bits (92), Expect = 7e-04
Identities = 19/41 (46%), Positives = 28/41 (68%)
Frame = +1
Query: 571 AHTTPPVLTPSPATGEQLSKVIKERKLFPFFDMAYQGFATG 693
AH P + P+ + +++VIK + LF FFD+AYQGFA+G
Sbjct: 185 AHN-PTGMDPTQEQWKLVAEVIKRKNLFTFFDIAYQGFASG 224
>U58726-3|AAB00577.1| 357|Caenorhabditis elegans Hypothetical
protein T01C8.4 protein.
Length = 357
Score = 87.8 bits (208), Expect = 7e-18
Identities = 46/131 (35%), Positives = 75/131 (57%), Gaps = 1/131 (0%)
Frame = +3
Query: 27 TWWNNVXMGPPDVILXITEAYKKDTHPKKVNLGVGAYRDDEGKPFVLPSVRKAE-EILHS 203
++++ + + P L +E ++K+ P K+NL + AYR ++G+P+VLP VR+ E + H
Sbjct: 4 SFFDGIHVASPIKELHTSELFQKEICPVKINLAIEAYRTEDGEPWVLPVVREIELKFPHE 63
Query: 204 RGLNHEYAPISGEATYTDAVAKLAFGEDSPVIKNRSNCTVQTLSGTGALRLGLEFITKHY 383
NHEY PI G + + L G DS IK + +VQ +SGTGA+ +G EF+ +
Sbjct: 64 PHHNHEYLPILGHDGFCKSATALLLGNDSLAIKEGRSFSVQCISGTGAICVGAEFLAQ-V 122
Query: 384 AKAKEIWLPTP 416
K I++ P
Sbjct: 123 LSMKTIYVSNP 133
>U46671-1|AAA85747.1| 364|Caenorhabditis elegans Hypothetical
protein C14E2.2 protein.
Length = 364
Score = 47.2 bits (107), Expect = 1e-05
Identities = 23/78 (29%), Positives = 40/78 (51%), Gaps = 1/78 (1%)
Frame = +3
Query: 426 NHPQICNTLNLPH-KKYRYFDPKTNGFDLQGALEDISKIPEGSIILLHACAHNPTGVDPK 602
+H IC +Y +++ + D++ L D+ P S+I+L ACA+NPTG+D
Sbjct: 91 SHHLICKKAGFTTVAEYTFWNYEEKCVDIEKLLSDLEFAPAKSVIILPACAYNPTGMDLS 150
Query: 603 PSDWGTTFQGDQRKEIIP 656
+ W + +RK + P
Sbjct: 151 ENQWKQIARVIKRKRLFP 168
Score = 41.1 bits (92), Expect = 7e-04
Identities = 15/26 (57%), Positives = 24/26 (92%)
Frame = +1
Query: 616 EQLSKVIKERKLFPFFDMAYQGFATG 693
+Q+++VIK ++LFPFFD++YQG A+G
Sbjct: 155 KQIARVIKRKRLFPFFDISYQGCASG 180
>U80846-5|AAP82647.1| 825|Caenorhabditis elegans Hypothetical
protein K06A9.1c protein.
Length = 825
Score = 37.5 bits (83), Expect = 0.009
Identities = 25/79 (31%), Positives = 43/79 (54%)
Frame = -1
Query: 367 NSSPSRSAPVPDNVCTVQLLLFLMTGLSSPKASLATASVYVASPLMGAYSWLSPLL*RIS 188
+S + S+P+P ++ T L + + SSP A+ +T V ++S + + S P ++
Sbjct: 27 SSLGTSSSPLPSSISTSALPIASSSASSSPSAASSTTPVVLSSSTIQSSSGTFPS--SVA 84
Query: 187 SAFLTEGKTNGFPSSSLYA 131
S+ T G T+G SSS YA
Sbjct: 85 SSPSTVGSTSGAASSSSYA 103
>U80846-4|AAC70889.1| 1032|Caenorhabditis elegans Hypothetical
protein K06A9.1a protein.
Length = 1032
Score = 37.5 bits (83), Expect = 0.009
Identities = 25/79 (31%), Positives = 43/79 (54%)
Frame = -1
Query: 367 NSSPSRSAPVPDNVCTVQLLLFLMTGLSSPKASLATASVYVASPLMGAYSWLSPLL*RIS 188
+S + S+P+P ++ T L + + SSP A+ +T V ++S + + S P ++
Sbjct: 234 SSLGTSSSPLPSSISTSALPIASSSASSSPSAASSTTPVVLSSSTIQSSSGTFPS--SVA 291
Query: 187 SAFLTEGKTNGFPSSSLYA 131
S+ T G T+G SSS YA
Sbjct: 292 SSPSTVGSTSGAASSSSYA 310
>U80846-3|AAC70890.1| 2232|Caenorhabditis elegans Hypothetical
protein K06A9.1b protein.
Length = 2232
Score = 37.5 bits (83), Expect = 0.009
Identities = 25/79 (31%), Positives = 43/79 (54%)
Frame = -1
Query: 367 NSSPSRSAPVPDNVCTVQLLLFLMTGLSSPKASLATASVYVASPLMGAYSWLSPLL*RIS 188
+S + S+P+P ++ T L + + SSP A+ +T V ++S + + S P ++
Sbjct: 234 SSLGTSSSPLPSSISTSALPIASSSASSSPSAASSTTPVVLSSSTIQSSSGTFPS--SVA 291
Query: 187 SAFLTEGKTNGFPSSSLYA 131
S+ T G T+G SSS YA
Sbjct: 292 SSPSTVGSTSGAASSSSYA 310
>U23486-8|AAC46779.3| 1025|Caenorhabditis elegans Nmda class
glutamate receptor protein1 protein.
Length = 1025
Score = 30.3 bits (65), Expect = 1.4
Identities = 22/54 (40%), Positives = 28/54 (51%), Gaps = 4/54 (7%)
Frame = -1
Query: 595 STPVGL---CAHACNRIMEPSGIFD-ISSSAPCKSKPLVLGSK*RYFLCGKLRV 446
+TP+G CA N ++E S IFD I S P S PL L + YF C L +
Sbjct: 410 TTPIGSPSQCAELGNTVVEWS-IFDKIVVSGPWYSCPLTLENSTEYFCCAGLAI 462
>AF318613-1|AAK01101.2| 1025|Caenorhabditis elegans NMDA-type
ionotropic glutamatereceptor NMR-1 protein.
Length = 1025
Score = 30.3 bits (65), Expect = 1.4
Identities = 22/54 (40%), Positives = 28/54 (51%), Gaps = 4/54 (7%)
Frame = -1
Query: 595 STPVGL---CAHACNRIMEPSGIFD-ISSSAPCKSKPLVLGSK*RYFLCGKLRV 446
+TP+G CA N ++E S IFD I S P S PL L + YF C L +
Sbjct: 410 TTPIGSPSQCAELGNTVVEWS-IFDKIVVSGPWYSCPLTLENSTEYFCCAGLAI 462
>U80453-9|AAT81206.1| 432|Caenorhabditis elegans Hypothetical
protein C23H3.9d protein.
Length = 432
Score = 29.5 bits (63), Expect = 2.4
Identities = 20/71 (28%), Positives = 29/71 (40%)
Frame = +1
Query: 454 TCRTRNTVTSIPRPMVSICREHSRIYQKFPKVPLFCCTRAHTTPPVLTPSPATGEQLSKV 633
T T T+ P S R HSR + ++PL T T P AT +
Sbjct: 55 TTEATTTETTPEAPTTSEPRSHSRDARPTQRLPLTWSTVTPTAAPSQPIPTATSRKAPWY 114
Query: 634 IKERKLFPFFD 666
IK+R +P ++
Sbjct: 115 IKDRTAWPTYN 125
>U64835-5|AAG24196.1| 592|Caenorhabditis elegans Hypothetical
protein T09D3.3 protein.
Length = 592
Score = 29.1 bits (62), Expect = 3.2
Identities = 18/59 (30%), Positives = 27/59 (45%)
Frame = +1
Query: 427 TTRKSATPSTCRTRNTVTSIPRPMVSICREHSRIYQKFPKVPLFCCTRAHTTPPVLTPS 603
T S + ST T TS P+ +V++ + + K KVP+ T PP + PS
Sbjct: 488 TYTTSTSTSTTTTLPPTTSTPKIVVNLTPIYPDMLMKANKVPMIPAYGIWTIPPHVPPS 546
>Z70756-10|CAI46587.1| 228|Caenorhabditis elegans Hypothetical
protein T06E4.12 protein.
Length = 228
Score = 27.5 bits (58), Expect = 9.8
Identities = 13/34 (38%), Positives = 20/34 (58%)
Frame = -1
Query: 322 TVQLLLFLMTGLSSPKASLATASVYVASPLMGAY 221
++Q L+FL + L +L++A V V P MG Y
Sbjct: 3 SLQYLIFLFSSLLFAGLALSSAQVAVNGPFMGRY 36
>U40948-1|AAA81727.1| 730|Caenorhabditis elegans Gliotactin
(drosophila neuroligin-like) homolog protein 1 protein.
Length = 730
Score = 27.5 bits (58), Expect = 9.8
Identities = 11/24 (45%), Positives = 14/24 (58%)
Frame = -2
Query: 630 LGKLFPSRWAWGQHRWGCVRTRAT 559
LG+ A QHRW C+ TR+T
Sbjct: 325 LGRYAGCTQAVAQHRWDCILTRST 348
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,758,420
Number of Sequences: 27780
Number of extensions: 452839
Number of successful extensions: 1321
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 1247
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1311
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1613473434
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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