BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= brP-0630 (700 letters) Database: celegans 27,780 sequences; 12,740,198 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value U39645-9|AAM51511.1| 297|Caenorhabditis elegans Hypothetical pr... 255 3e-68 U39645-8|AAA80361.1| 414|Caenorhabditis elegans Hypothetical pr... 255 3e-68 AF003140-10|AAD47121.2| 419|Caenorhabditis elegans Hypothetical... 237 7e-63 U58726-4|AAB00578.1| 408|Caenorhabditis elegans Hypothetical pr... 162 2e-40 U58726-3|AAB00577.1| 357|Caenorhabditis elegans Hypothetical pr... 88 7e-18 U46671-1|AAA85747.1| 364|Caenorhabditis elegans Hypothetical pr... 47 1e-05 U80846-5|AAP82647.1| 825|Caenorhabditis elegans Hypothetical pr... 38 0.009 U80846-4|AAC70889.1| 1032|Caenorhabditis elegans Hypothetical pr... 38 0.009 U80846-3|AAC70890.1| 2232|Caenorhabditis elegans Hypothetical pr... 38 0.009 U23486-8|AAC46779.3| 1025|Caenorhabditis elegans Nmda class glut... 30 1.4 AF318613-1|AAK01101.2| 1025|Caenorhabditis elegans NMDA-type ion... 30 1.4 U80453-9|AAT81206.1| 432|Caenorhabditis elegans Hypothetical pr... 29 2.4 U64835-5|AAG24196.1| 592|Caenorhabditis elegans Hypothetical pr... 29 3.2 Z70756-10|CAI46587.1| 228|Caenorhabditis elegans Hypothetical p... 27 9.8 U40948-1|AAA81727.1| 730|Caenorhabditis elegans Gliotactin (dro... 27 9.8 >U39645-9|AAM51511.1| 297|Caenorhabditis elegans Hypothetical protein C14F11.1b protein. Length = 297 Score = 255 bits (624), Expect = 3e-68 Identities = 118/200 (59%), Positives = 148/200 (74%) Frame = +3 Query: 15 ISSSTWWNNVXMGPPDVILXITEAYKKDTHPKKVNLGVGAYRDDEGKPFVLPSVRKAEEI 194 + +WW++V MGPPD IL +TEA+K D++PKK+NLGVGAYRDD+GKPFVLPSV++AE Sbjct: 12 VRGKSWWSHVEMGPPDAILGVTEAFKADSNPKKINLGVGAYRDDQGKPFVLPSVKEAERQ 71 Query: 195 LHSRGLNHEYAPISGEATYTDAVAKLAFGEDSPVIKNRSNCTVQTLSGTGALRLGLEFIT 374 + + L+ EYA I G +T A+LA GE+S VIKN+ T Q++SGTGALR+G EF++ Sbjct: 72 VIAANLDKEYAGIVGLPEFTKLSAQLALGENSDVIKNKRIFTTQSISGTGALRIGSEFLS 131 Query: 375 KHYAKAKEIWLPTPTWGNHPQICNTLNLPHKKYRYFDPKTNGFDLQGALEDISKIPEGSI 554 K YAK K I+ PTPTWGNH I + K+YRY+D T GFD GAL DI++IPEGS Sbjct: 132 K-YAKTKVIYQPTPTWGNHVPIFKFAGVDVKQYRYYDKSTCGFDETGALADIAQIPEGST 190 Query: 555 ILLHACAHNPTGVDPKPSDW 614 ILLHACAHNPTGVDP W Sbjct: 191 ILLHACAHNPTGVDPSRDQW 210 >U39645-8|AAA80361.1| 414|Caenorhabditis elegans Hypothetical protein C14F11.1a protein. Length = 414 Score = 255 bits (624), Expect = 3e-68 Identities = 118/200 (59%), Positives = 148/200 (74%) Frame = +3 Query: 15 ISSSTWWNNVXMGPPDVILXITEAYKKDTHPKKVNLGVGAYRDDEGKPFVLPSVRKAEEI 194 + +WW++V MGPPD IL +TEA+K D++PKK+NLGVGAYRDD+GKPFVLPSV++AE Sbjct: 12 VRGKSWWSHVEMGPPDAILGVTEAFKADSNPKKINLGVGAYRDDQGKPFVLPSVKEAERQ 71 Query: 195 LHSRGLNHEYAPISGEATYTDAVAKLAFGEDSPVIKNRSNCTVQTLSGTGALRLGLEFIT 374 + + L+ EYA I G +T A+LA GE+S VIKN+ T Q++SGTGALR+G EF++ Sbjct: 72 VIAANLDKEYAGIVGLPEFTKLSAQLALGENSDVIKNKRIFTTQSISGTGALRIGSEFLS 131 Query: 375 KHYAKAKEIWLPTPTWGNHPQICNTLNLPHKKYRYFDPKTNGFDLQGALEDISKIPEGSI 554 K YAK K I+ PTPTWGNH I + K+YRY+D T GFD GAL DI++IPEGS Sbjct: 132 K-YAKTKVIYQPTPTWGNHVPIFKFAGVDVKQYRYYDKSTCGFDETGALADIAQIPEGST 190 Query: 555 ILLHACAHNPTGVDPKPSDW 614 ILLHACAHNPTGVDP W Sbjct: 191 ILLHACAHNPTGVDPSRDQW 210 Score = 45.2 bits (102), Expect = 5e-05 Identities = 21/41 (51%), Positives = 29/41 (70%) Frame = +1 Query: 571 AHTTPPVLTPSPATGEQLSKVIKERKLFPFFDMAYQGFATG 693 AH P + PS +++S ++K+R LF FFDMAYQGFA+G Sbjct: 197 AHN-PTGVDPSRDQWKKISDIVKKRNLFVFFDMAYQGFASG 236 >AF003140-10|AAD47121.2| 419|Caenorhabditis elegans Hypothetical protein C44E4.3 protein. Length = 419 Score = 237 bits (579), Expect = 7e-63 Identities = 108/209 (51%), Positives = 150/209 (71%) Frame = +3 Query: 30 WWNNVXMGPPDVILXITEAYKKDTHPKKVNLGVGAYRDDEGKPFVLPSVRKAEEILHSRG 209 W+ NV + P D IL +TEA+KKDT+P K+NLGVGAYRDD+GKPFVL +VR+AE+ + Sbjct: 22 WFRNVPLAPADPILGVTEAFKKDTNPNKINLGVGAYRDDQGKPFVLRAVREAEQQIIDAK 81 Query: 210 LNHEYAPISGEATYTDAVAKLAFGEDSPVIKNRSNCTVQTLSGTGALRLGLEFITKHYAK 389 ++ EY+ I+G + AKLAFG++S VI++ T Q++SGTGALR+G +F+ K + Sbjct: 82 MDKEYSTITGVPEFAPLAAKLAFGDNSEVIRDGRVFTTQSISGTGALRIGGQFVEK-FIP 140 Query: 390 AKEIWLPTPTWGNHPQICNTLNLPHKKYRYFDPKTNGFDLQGALEDISKIPEGSIILLHA 569 +K ++ PTPTW NH + L + YRY++ +T GFD++GALEDISK+PEGS+ILLHA Sbjct: 141 SKTLFYPTPTWANHLPVFRNSGLSIQPYRYYNQETLGFDVEGALEDISKMPEGSVILLHA 200 Query: 570 CAHNPTGVDPKPSDWGTTFQGDQRKEIIP 656 CAHNPTGVDP W Q + ++I+P Sbjct: 201 CAHNPTGVDPTKEQWKKLSQVLKERKILP 229 Score = 50.4 bits (115), Expect = 1e-06 Identities = 23/41 (56%), Positives = 31/41 (75%) Frame = +1 Query: 571 AHTTPPVLTPSPATGEQLSKVIKERKLFPFFDMAYQGFATG 693 AH P + P+ ++LS+V+KERK+ PFFDMAYQGFA+G Sbjct: 202 AHN-PTGVDPTKEQWKKLSQVLKERKILPFFDMAYQGFASG 241 >U58726-4|AAB00578.1| 408|Caenorhabditis elegans Hypothetical protein T01C8.5 protein. Length = 408 Score = 162 bits (393), Expect = 2e-40 Identities = 79/210 (37%), Positives = 115/210 (54%), Gaps = 2/210 (0%) Frame = +3 Query: 27 TWWNNVXMGPPDVILXITEAYKKDTHPKKVNLGVGAYRDDEGKPFVLPSVRKAE-EILHS 203 ++++ + + PP + + Y +T P KVNL +GAYR +EG+P+VLP V + E EI + Sbjct: 2 SFFDGIPVAPPIEVFHKNKMYLDETAPVKVNLTIGAYRTEEGQPWVLPVVHETEVEIAND 61 Query: 204 RGLNHEYAPISGEATYTDAVAKLAFGEDSPVIKNRSNCTVQTLSGTGALRLGLEFITKHY 383 LNHEY P+ G + A +L G +SP IK + VQ LSGTGALR G EF+ Sbjct: 62 TSLNHEYLPVLGHEGFRKAATELVLGAESPAIKEERSFGVQCLSGTGALRAGAEFLAS-V 120 Query: 384 AKAKEIWLPTPTWGNHPQICNTLNLPH-KKYRYFDPKTNGFDLQGALEDISKIPEGSIIL 560 K +++ PTWGNH + Y ++D ++ L D+ PE S+I+ Sbjct: 121 CNMKTVYVSNPTWGNHKLVFKKAGFTTVADYTFWDYDNKRVHIEKFLSDLESAPEKSVII 180 Query: 561 LHACAHNPTGVDPKPSDWGTTFQGDQRKEI 650 LH CAHNPTG+DP W + +RK + Sbjct: 181 LHGCAHNPTGMDPTQEQWKLVAEVIKRKNL 210 Score = 41.1 bits (92), Expect = 7e-04 Identities = 19/41 (46%), Positives = 28/41 (68%) Frame = +1 Query: 571 AHTTPPVLTPSPATGEQLSKVIKERKLFPFFDMAYQGFATG 693 AH P + P+ + +++VIK + LF FFD+AYQGFA+G Sbjct: 185 AHN-PTGMDPTQEQWKLVAEVIKRKNLFTFFDIAYQGFASG 224 >U58726-3|AAB00577.1| 357|Caenorhabditis elegans Hypothetical protein T01C8.4 protein. Length = 357 Score = 87.8 bits (208), Expect = 7e-18 Identities = 46/131 (35%), Positives = 75/131 (57%), Gaps = 1/131 (0%) Frame = +3 Query: 27 TWWNNVXMGPPDVILXITEAYKKDTHPKKVNLGVGAYRDDEGKPFVLPSVRKAE-EILHS 203 ++++ + + P L +E ++K+ P K+NL + AYR ++G+P+VLP VR+ E + H Sbjct: 4 SFFDGIHVASPIKELHTSELFQKEICPVKINLAIEAYRTEDGEPWVLPVVREIELKFPHE 63 Query: 204 RGLNHEYAPISGEATYTDAVAKLAFGEDSPVIKNRSNCTVQTLSGTGALRLGLEFITKHY 383 NHEY PI G + + L G DS IK + +VQ +SGTGA+ +G EF+ + Sbjct: 64 PHHNHEYLPILGHDGFCKSATALLLGNDSLAIKEGRSFSVQCISGTGAICVGAEFLAQ-V 122 Query: 384 AKAKEIWLPTP 416 K I++ P Sbjct: 123 LSMKTIYVSNP 133 >U46671-1|AAA85747.1| 364|Caenorhabditis elegans Hypothetical protein C14E2.2 protein. Length = 364 Score = 47.2 bits (107), Expect = 1e-05 Identities = 23/78 (29%), Positives = 40/78 (51%), Gaps = 1/78 (1%) Frame = +3 Query: 426 NHPQICNTLNLPH-KKYRYFDPKTNGFDLQGALEDISKIPEGSIILLHACAHNPTGVDPK 602 +H IC +Y +++ + D++ L D+ P S+I+L ACA+NPTG+D Sbjct: 91 SHHLICKKAGFTTVAEYTFWNYEEKCVDIEKLLSDLEFAPAKSVIILPACAYNPTGMDLS 150 Query: 603 PSDWGTTFQGDQRKEIIP 656 + W + +RK + P Sbjct: 151 ENQWKQIARVIKRKRLFP 168 Score = 41.1 bits (92), Expect = 7e-04 Identities = 15/26 (57%), Positives = 24/26 (92%) Frame = +1 Query: 616 EQLSKVIKERKLFPFFDMAYQGFATG 693 +Q+++VIK ++LFPFFD++YQG A+G Sbjct: 155 KQIARVIKRKRLFPFFDISYQGCASG 180 >U80846-5|AAP82647.1| 825|Caenorhabditis elegans Hypothetical protein K06A9.1c protein. Length = 825 Score = 37.5 bits (83), Expect = 0.009 Identities = 25/79 (31%), Positives = 43/79 (54%) Frame = -1 Query: 367 NSSPSRSAPVPDNVCTVQLLLFLMTGLSSPKASLATASVYVASPLMGAYSWLSPLL*RIS 188 +S + S+P+P ++ T L + + SSP A+ +T V ++S + + S P ++ Sbjct: 27 SSLGTSSSPLPSSISTSALPIASSSASSSPSAASSTTPVVLSSSTIQSSSGTFPS--SVA 84 Query: 187 SAFLTEGKTNGFPSSSLYA 131 S+ T G T+G SSS YA Sbjct: 85 SSPSTVGSTSGAASSSSYA 103 >U80846-4|AAC70889.1| 1032|Caenorhabditis elegans Hypothetical protein K06A9.1a protein. Length = 1032 Score = 37.5 bits (83), Expect = 0.009 Identities = 25/79 (31%), Positives = 43/79 (54%) Frame = -1 Query: 367 NSSPSRSAPVPDNVCTVQLLLFLMTGLSSPKASLATASVYVASPLMGAYSWLSPLL*RIS 188 +S + S+P+P ++ T L + + SSP A+ +T V ++S + + S P ++ Sbjct: 234 SSLGTSSSPLPSSISTSALPIASSSASSSPSAASSTTPVVLSSSTIQSSSGTFPS--SVA 291 Query: 187 SAFLTEGKTNGFPSSSLYA 131 S+ T G T+G SSS YA Sbjct: 292 SSPSTVGSTSGAASSSSYA 310 >U80846-3|AAC70890.1| 2232|Caenorhabditis elegans Hypothetical protein K06A9.1b protein. Length = 2232 Score = 37.5 bits (83), Expect = 0.009 Identities = 25/79 (31%), Positives = 43/79 (54%) Frame = -1 Query: 367 NSSPSRSAPVPDNVCTVQLLLFLMTGLSSPKASLATASVYVASPLMGAYSWLSPLL*RIS 188 +S + S+P+P ++ T L + + SSP A+ +T V ++S + + S P ++ Sbjct: 234 SSLGTSSSPLPSSISTSALPIASSSASSSPSAASSTTPVVLSSSTIQSSSGTFPS--SVA 291 Query: 187 SAFLTEGKTNGFPSSSLYA 131 S+ T G T+G SSS YA Sbjct: 292 SSPSTVGSTSGAASSSSYA 310 >U23486-8|AAC46779.3| 1025|Caenorhabditis elegans Nmda class glutamate receptor protein1 protein. Length = 1025 Score = 30.3 bits (65), Expect = 1.4 Identities = 22/54 (40%), Positives = 28/54 (51%), Gaps = 4/54 (7%) Frame = -1 Query: 595 STPVGL---CAHACNRIMEPSGIFD-ISSSAPCKSKPLVLGSK*RYFLCGKLRV 446 +TP+G CA N ++E S IFD I S P S PL L + YF C L + Sbjct: 410 TTPIGSPSQCAELGNTVVEWS-IFDKIVVSGPWYSCPLTLENSTEYFCCAGLAI 462 >AF318613-1|AAK01101.2| 1025|Caenorhabditis elegans NMDA-type ionotropic glutamatereceptor NMR-1 protein. Length = 1025 Score = 30.3 bits (65), Expect = 1.4 Identities = 22/54 (40%), Positives = 28/54 (51%), Gaps = 4/54 (7%) Frame = -1 Query: 595 STPVGL---CAHACNRIMEPSGIFD-ISSSAPCKSKPLVLGSK*RYFLCGKLRV 446 +TP+G CA N ++E S IFD I S P S PL L + YF C L + Sbjct: 410 TTPIGSPSQCAELGNTVVEWS-IFDKIVVSGPWYSCPLTLENSTEYFCCAGLAI 462 >U80453-9|AAT81206.1| 432|Caenorhabditis elegans Hypothetical protein C23H3.9d protein. Length = 432 Score = 29.5 bits (63), Expect = 2.4 Identities = 20/71 (28%), Positives = 29/71 (40%) Frame = +1 Query: 454 TCRTRNTVTSIPRPMVSICREHSRIYQKFPKVPLFCCTRAHTTPPVLTPSPATGEQLSKV 633 T T T+ P S R HSR + ++PL T T P AT + Sbjct: 55 TTEATTTETTPEAPTTSEPRSHSRDARPTQRLPLTWSTVTPTAAPSQPIPTATSRKAPWY 114 Query: 634 IKERKLFPFFD 666 IK+R +P ++ Sbjct: 115 IKDRTAWPTYN 125 >U64835-5|AAG24196.1| 592|Caenorhabditis elegans Hypothetical protein T09D3.3 protein. Length = 592 Score = 29.1 bits (62), Expect = 3.2 Identities = 18/59 (30%), Positives = 27/59 (45%) Frame = +1 Query: 427 TTRKSATPSTCRTRNTVTSIPRPMVSICREHSRIYQKFPKVPLFCCTRAHTTPPVLTPS 603 T S + ST T TS P+ +V++ + + K KVP+ T PP + PS Sbjct: 488 TYTTSTSTSTTTTLPPTTSTPKIVVNLTPIYPDMLMKANKVPMIPAYGIWTIPPHVPPS 546 >Z70756-10|CAI46587.1| 228|Caenorhabditis elegans Hypothetical protein T06E4.12 protein. Length = 228 Score = 27.5 bits (58), Expect = 9.8 Identities = 13/34 (38%), Positives = 20/34 (58%) Frame = -1 Query: 322 TVQLLLFLMTGLSSPKASLATASVYVASPLMGAY 221 ++Q L+FL + L +L++A V V P MG Y Sbjct: 3 SLQYLIFLFSSLLFAGLALSSAQVAVNGPFMGRY 36 >U40948-1|AAA81727.1| 730|Caenorhabditis elegans Gliotactin (drosophila neuroligin-like) homolog protein 1 protein. Length = 730 Score = 27.5 bits (58), Expect = 9.8 Identities = 11/24 (45%), Positives = 14/24 (58%) Frame = -2 Query: 630 LGKLFPSRWAWGQHRWGCVRTRAT 559 LG+ A QHRW C+ TR+T Sbjct: 325 LGRYAGCTQAVAQHRWDCILTRST 348 Database: celegans Posted date: Oct 23, 2007 1:18 PM Number of letters in database: 12,740,198 Number of sequences in database: 27,780 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 18,758,420 Number of Sequences: 27780 Number of extensions: 452839 Number of successful extensions: 1321 Number of sequences better than 10.0: 15 Number of HSP's better than 10.0 without gapping: 1247 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1311 length of database: 12,740,198 effective HSP length: 79 effective length of database: 10,545,578 effective search space used: 1613473434 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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