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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brP-0630
         (700 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ667195-1|ABG75747.1|  469|Apis mellifera cys-loop ligand-gated...    24   1.6  
AY647436-1|AAU81605.1|  567|Apis mellifera juvenile hormone este...    23   3.7  
AY526235-1|AAS20468.1|  169|Apis mellifera esterase protein.           23   3.7  
AB083009-1|BAC54130.1|  567|Apis mellifera esterase protein.           23   3.7  
AY569717-1|AAS86670.1|  397|Apis mellifera complementary sex det...    21   8.5  
AY569712-1|AAS86665.1|  408|Apis mellifera complementary sex det...    21   8.5  
AY569703-1|AAS86656.1|  396|Apis mellifera complementary sex det...    21   8.5  
AY569701-1|AAS86654.1|  407|Apis mellifera complementary sex det...    21   8.5  
AY569700-1|AAS86653.1|  407|Apis mellifera complementary sex det...    21   8.5  
AY569699-1|AAS86652.1|  396|Apis mellifera complementary sex det...    21   8.5  
AY569697-1|AAS86650.1|  413|Apis mellifera complementary sex det...    21   8.5  
AB207270-1|BAE72137.1|  429|Apis mellifera broad-complex protein.      21   8.5  

>DQ667195-1|ABG75747.1|  469|Apis mellifera cys-loop ligand-gated
           ion channel subunit protein.
          Length = 469

 Score = 23.8 bits (49), Expect = 1.6
 Identities = 11/29 (37%), Positives = 15/29 (51%)
 Frame = -1

Query: 160 NGFPSSSLYAPTPRFTFLGCVSFLYASVM 74
           N  P  S Y       FLGC  FL+A+++
Sbjct: 283 NSLPKVS-YIKASEIWFLGCTIFLFAAMV 310


>AY647436-1|AAU81605.1|  567|Apis mellifera juvenile hormone
           esterase protein.
          Length = 567

 Score = 22.6 bits (46), Expect = 3.7
 Identities = 11/28 (39%), Positives = 17/28 (60%)
 Frame = -1

Query: 661 RTGIISFL*SPWKVVPQSLGLGSTPVGL 578
           R GI+ FL +  +VVP ++GL    + L
Sbjct: 159 RLGILGFLSTEDEVVPGNMGLKDQSMAL 186


>AY526235-1|AAS20468.1|  169|Apis mellifera esterase protein.
          Length = 169

 Score = 22.6 bits (46), Expect = 3.7
 Identities = 11/28 (39%), Positives = 17/28 (60%)
 Frame = -1

Query: 661 RTGIISFL*SPWKVVPQSLGLGSTPVGL 578
           R GI+ FL +  +VVP ++GL    + L
Sbjct: 30  RLGILGFLSTEDEVVPGNMGLKDQSMAL 57


>AB083009-1|BAC54130.1|  567|Apis mellifera esterase protein.
          Length = 567

 Score = 22.6 bits (46), Expect = 3.7
 Identities = 11/28 (39%), Positives = 17/28 (60%)
 Frame = -1

Query: 661 RTGIISFL*SPWKVVPQSLGLGSTPVGL 578
           R GI+ FL +  +VVP ++GL    + L
Sbjct: 159 RLGILGFLSTEDEVVPGNMGLKDQSMAL 186


>AY569717-1|AAS86670.1|  397|Apis mellifera complementary sex
           determiner protein.
          Length = 397

 Score = 21.4 bits (43), Expect = 8.5
 Identities = 12/48 (25%), Positives = 20/48 (41%)
 Frame = -3

Query: 431 VVSPSRRREPDLLCLSVVFRYELESESECASAGQCLYSTVAPIFDDRT 288
           ++   R RE + L   ++  YEL    E    G     + +P   DR+
Sbjct: 44  LIQQEREREHERLMKKMILEYELRRIREIEKLGSERSKSRSPDSRDRS 91


>AY569712-1|AAS86665.1|  408|Apis mellifera complementary sex
           determiner protein.
          Length = 408

 Score = 21.4 bits (43), Expect = 8.5
 Identities = 12/48 (25%), Positives = 20/48 (41%)
 Frame = -3

Query: 431 VVSPSRRREPDLLCLSVVFRYELESESECASAGQCLYSTVAPIFDDRT 288
           ++   R RE + L   ++  YEL    E    G     + +P   DR+
Sbjct: 44  LIQQEREREHERLMKKMILEYELRRIREIEKLGSERSKSRSPDSRDRS 91


>AY569703-1|AAS86656.1|  396|Apis mellifera complementary sex
           determiner protein.
          Length = 396

 Score = 21.4 bits (43), Expect = 8.5
 Identities = 12/48 (25%), Positives = 20/48 (41%)
 Frame = -3

Query: 431 VVSPSRRREPDLLCLSVVFRYELESESECASAGQCLYSTVAPIFDDRT 288
           ++   R RE + L   ++  YEL    E    G     + +P   DR+
Sbjct: 44  LIQQEREREHERLMKKMILEYELRRIREIEKLGSERSKSRSPDSRDRS 91


>AY569701-1|AAS86654.1|  407|Apis mellifera complementary sex
           determiner protein.
          Length = 407

 Score = 21.4 bits (43), Expect = 8.5
 Identities = 12/48 (25%), Positives = 20/48 (41%)
 Frame = -3

Query: 431 VVSPSRRREPDLLCLSVVFRYELESESECASAGQCLYSTVAPIFDDRT 288
           ++   R RE + L   ++  YEL    E    G     + +P   DR+
Sbjct: 44  LIQQEREREHERLMKKMILEYELRRIREIEKLGSERSKSRSPDSRDRS 91


>AY569700-1|AAS86653.1|  407|Apis mellifera complementary sex
           determiner protein.
          Length = 407

 Score = 21.4 bits (43), Expect = 8.5
 Identities = 12/48 (25%), Positives = 20/48 (41%)
 Frame = -3

Query: 431 VVSPSRRREPDLLCLSVVFRYELESESECASAGQCLYSTVAPIFDDRT 288
           ++   R RE + L   ++  YEL    E    G     + +P   DR+
Sbjct: 44  LIQQEREREHERLMKKMILEYELRRIREIEKLGSERSKSRSPDSRDRS 91


>AY569699-1|AAS86652.1|  396|Apis mellifera complementary sex
           determiner protein.
          Length = 396

 Score = 21.4 bits (43), Expect = 8.5
 Identities = 12/48 (25%), Positives = 20/48 (41%)
 Frame = -3

Query: 431 VVSPSRRREPDLLCLSVVFRYELESESECASAGQCLYSTVAPIFDDRT 288
           ++   R RE + L   ++  YEL    E    G     + +P   DR+
Sbjct: 44  LIQQEREREHERLMKKMILEYELRRIREIEKLGSERSKSRSPDSRDRS 91


>AY569697-1|AAS86650.1|  413|Apis mellifera complementary sex
           determiner protein.
          Length = 413

 Score = 21.4 bits (43), Expect = 8.5
 Identities = 12/48 (25%), Positives = 20/48 (41%)
 Frame = -3

Query: 431 VVSPSRRREPDLLCLSVVFRYELESESECASAGQCLYSTVAPIFDDRT 288
           ++   R RE + L   ++  YEL    E    G     + +P   DR+
Sbjct: 44  LIQQEREREHERLMKKMILEYELRRIREIEKLGSERSKSRSPDSRDRS 91


>AB207270-1|BAE72137.1|  429|Apis mellifera broad-complex protein.
          Length = 429

 Score = 21.4 bits (43), Expect = 8.5
 Identities = 12/44 (27%), Positives = 22/44 (50%)
 Frame = +1

Query: 517 HSRIYQKFPKVPLFCCTRAHTTPPVLTPSPATGEQLSKVIKERK 648
           H ++ + FP        R  + P  +TP+P T +QL +  + R+
Sbjct: 143 HEKLVESFP--------RGGSLPTPVTPTPTTVQQLLRRAQIRR 178


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 227,080
Number of Sequences: 438
Number of extensions: 5363
Number of successful extensions: 33
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 33
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 33
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 21439440
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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