Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brP-0630
(700 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ667195-1|ABG75747.1| 469|Apis mellifera cys-loop ligand-gated... 24 1.6
AY647436-1|AAU81605.1| 567|Apis mellifera juvenile hormone este... 23 3.7
AY526235-1|AAS20468.1| 169|Apis mellifera esterase protein. 23 3.7
AB083009-1|BAC54130.1| 567|Apis mellifera esterase protein. 23 3.7
AY569717-1|AAS86670.1| 397|Apis mellifera complementary sex det... 21 8.5
AY569712-1|AAS86665.1| 408|Apis mellifera complementary sex det... 21 8.5
AY569703-1|AAS86656.1| 396|Apis mellifera complementary sex det... 21 8.5
AY569701-1|AAS86654.1| 407|Apis mellifera complementary sex det... 21 8.5
AY569700-1|AAS86653.1| 407|Apis mellifera complementary sex det... 21 8.5
AY569699-1|AAS86652.1| 396|Apis mellifera complementary sex det... 21 8.5
AY569697-1|AAS86650.1| 413|Apis mellifera complementary sex det... 21 8.5
AB207270-1|BAE72137.1| 429|Apis mellifera broad-complex protein. 21 8.5
>DQ667195-1|ABG75747.1| 469|Apis mellifera cys-loop ligand-gated
ion channel subunit protein.
Length = 469
Score = 23.8 bits (49), Expect = 1.6
Identities = 11/29 (37%), Positives = 15/29 (51%)
Frame = -1
Query: 160 NGFPSSSLYAPTPRFTFLGCVSFLYASVM 74
N P S Y FLGC FL+A+++
Sbjct: 283 NSLPKVS-YIKASEIWFLGCTIFLFAAMV 310
>AY647436-1|AAU81605.1| 567|Apis mellifera juvenile hormone
esterase protein.
Length = 567
Score = 22.6 bits (46), Expect = 3.7
Identities = 11/28 (39%), Positives = 17/28 (60%)
Frame = -1
Query: 661 RTGIISFL*SPWKVVPQSLGLGSTPVGL 578
R GI+ FL + +VVP ++GL + L
Sbjct: 159 RLGILGFLSTEDEVVPGNMGLKDQSMAL 186
>AY526235-1|AAS20468.1| 169|Apis mellifera esterase protein.
Length = 169
Score = 22.6 bits (46), Expect = 3.7
Identities = 11/28 (39%), Positives = 17/28 (60%)
Frame = -1
Query: 661 RTGIISFL*SPWKVVPQSLGLGSTPVGL 578
R GI+ FL + +VVP ++GL + L
Sbjct: 30 RLGILGFLSTEDEVVPGNMGLKDQSMAL 57
>AB083009-1|BAC54130.1| 567|Apis mellifera esterase protein.
Length = 567
Score = 22.6 bits (46), Expect = 3.7
Identities = 11/28 (39%), Positives = 17/28 (60%)
Frame = -1
Query: 661 RTGIISFL*SPWKVVPQSLGLGSTPVGL 578
R GI+ FL + +VVP ++GL + L
Sbjct: 159 RLGILGFLSTEDEVVPGNMGLKDQSMAL 186
>AY569717-1|AAS86670.1| 397|Apis mellifera complementary sex
determiner protein.
Length = 397
Score = 21.4 bits (43), Expect = 8.5
Identities = 12/48 (25%), Positives = 20/48 (41%)
Frame = -3
Query: 431 VVSPSRRREPDLLCLSVVFRYELESESECASAGQCLYSTVAPIFDDRT 288
++ R RE + L ++ YEL E G + +P DR+
Sbjct: 44 LIQQEREREHERLMKKMILEYELRRIREIEKLGSERSKSRSPDSRDRS 91
>AY569712-1|AAS86665.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 21.4 bits (43), Expect = 8.5
Identities = 12/48 (25%), Positives = 20/48 (41%)
Frame = -3
Query: 431 VVSPSRRREPDLLCLSVVFRYELESESECASAGQCLYSTVAPIFDDRT 288
++ R RE + L ++ YEL E G + +P DR+
Sbjct: 44 LIQQEREREHERLMKKMILEYELRRIREIEKLGSERSKSRSPDSRDRS 91
>AY569703-1|AAS86656.1| 396|Apis mellifera complementary sex
determiner protein.
Length = 396
Score = 21.4 bits (43), Expect = 8.5
Identities = 12/48 (25%), Positives = 20/48 (41%)
Frame = -3
Query: 431 VVSPSRRREPDLLCLSVVFRYELESESECASAGQCLYSTVAPIFDDRT 288
++ R RE + L ++ YEL E G + +P DR+
Sbjct: 44 LIQQEREREHERLMKKMILEYELRRIREIEKLGSERSKSRSPDSRDRS 91
>AY569701-1|AAS86654.1| 407|Apis mellifera complementary sex
determiner protein.
Length = 407
Score = 21.4 bits (43), Expect = 8.5
Identities = 12/48 (25%), Positives = 20/48 (41%)
Frame = -3
Query: 431 VVSPSRRREPDLLCLSVVFRYELESESECASAGQCLYSTVAPIFDDRT 288
++ R RE + L ++ YEL E G + +P DR+
Sbjct: 44 LIQQEREREHERLMKKMILEYELRRIREIEKLGSERSKSRSPDSRDRS 91
>AY569700-1|AAS86653.1| 407|Apis mellifera complementary sex
determiner protein.
Length = 407
Score = 21.4 bits (43), Expect = 8.5
Identities = 12/48 (25%), Positives = 20/48 (41%)
Frame = -3
Query: 431 VVSPSRRREPDLLCLSVVFRYELESESECASAGQCLYSTVAPIFDDRT 288
++ R RE + L ++ YEL E G + +P DR+
Sbjct: 44 LIQQEREREHERLMKKMILEYELRRIREIEKLGSERSKSRSPDSRDRS 91
>AY569699-1|AAS86652.1| 396|Apis mellifera complementary sex
determiner protein.
Length = 396
Score = 21.4 bits (43), Expect = 8.5
Identities = 12/48 (25%), Positives = 20/48 (41%)
Frame = -3
Query: 431 VVSPSRRREPDLLCLSVVFRYELESESECASAGQCLYSTVAPIFDDRT 288
++ R RE + L ++ YEL E G + +P DR+
Sbjct: 44 LIQQEREREHERLMKKMILEYELRRIREIEKLGSERSKSRSPDSRDRS 91
>AY569697-1|AAS86650.1| 413|Apis mellifera complementary sex
determiner protein.
Length = 413
Score = 21.4 bits (43), Expect = 8.5
Identities = 12/48 (25%), Positives = 20/48 (41%)
Frame = -3
Query: 431 VVSPSRRREPDLLCLSVVFRYELESESECASAGQCLYSTVAPIFDDRT 288
++ R RE + L ++ YEL E G + +P DR+
Sbjct: 44 LIQQEREREHERLMKKMILEYELRRIREIEKLGSERSKSRSPDSRDRS 91
>AB207270-1|BAE72137.1| 429|Apis mellifera broad-complex protein.
Length = 429
Score = 21.4 bits (43), Expect = 8.5
Identities = 12/44 (27%), Positives = 22/44 (50%)
Frame = +1
Query: 517 HSRIYQKFPKVPLFCCTRAHTTPPVLTPSPATGEQLSKVIKERK 648
H ++ + FP R + P +TP+P T +QL + + R+
Sbjct: 143 HEKLVESFP--------RGGSLPTPVTPTPTTVQQLLRRAQIRR 178
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 227,080
Number of Sequences: 438
Number of extensions: 5363
Number of successful extensions: 33
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 33
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 33
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 21439440
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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