BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= brP-0630 (700 letters) Database: bee 438 sequences; 146,343 total letters Searching......................................................done Score E Sequences producing significant alignments: (bits) Value DQ667195-1|ABG75747.1| 469|Apis mellifera cys-loop ligand-gated... 24 1.6 AY647436-1|AAU81605.1| 567|Apis mellifera juvenile hormone este... 23 3.7 AY526235-1|AAS20468.1| 169|Apis mellifera esterase protein. 23 3.7 AB083009-1|BAC54130.1| 567|Apis mellifera esterase protein. 23 3.7 AY569717-1|AAS86670.1| 397|Apis mellifera complementary sex det... 21 8.5 AY569712-1|AAS86665.1| 408|Apis mellifera complementary sex det... 21 8.5 AY569703-1|AAS86656.1| 396|Apis mellifera complementary sex det... 21 8.5 AY569701-1|AAS86654.1| 407|Apis mellifera complementary sex det... 21 8.5 AY569700-1|AAS86653.1| 407|Apis mellifera complementary sex det... 21 8.5 AY569699-1|AAS86652.1| 396|Apis mellifera complementary sex det... 21 8.5 AY569697-1|AAS86650.1| 413|Apis mellifera complementary sex det... 21 8.5 AB207270-1|BAE72137.1| 429|Apis mellifera broad-complex protein. 21 8.5 >DQ667195-1|ABG75747.1| 469|Apis mellifera cys-loop ligand-gated ion channel subunit protein. Length = 469 Score = 23.8 bits (49), Expect = 1.6 Identities = 11/29 (37%), Positives = 15/29 (51%) Frame = -1 Query: 160 NGFPSSSLYAPTPRFTFLGCVSFLYASVM 74 N P S Y FLGC FL+A+++ Sbjct: 283 NSLPKVS-YIKASEIWFLGCTIFLFAAMV 310 >AY647436-1|AAU81605.1| 567|Apis mellifera juvenile hormone esterase protein. Length = 567 Score = 22.6 bits (46), Expect = 3.7 Identities = 11/28 (39%), Positives = 17/28 (60%) Frame = -1 Query: 661 RTGIISFL*SPWKVVPQSLGLGSTPVGL 578 R GI+ FL + +VVP ++GL + L Sbjct: 159 RLGILGFLSTEDEVVPGNMGLKDQSMAL 186 >AY526235-1|AAS20468.1| 169|Apis mellifera esterase protein. Length = 169 Score = 22.6 bits (46), Expect = 3.7 Identities = 11/28 (39%), Positives = 17/28 (60%) Frame = -1 Query: 661 RTGIISFL*SPWKVVPQSLGLGSTPVGL 578 R GI+ FL + +VVP ++GL + L Sbjct: 30 RLGILGFLSTEDEVVPGNMGLKDQSMAL 57 >AB083009-1|BAC54130.1| 567|Apis mellifera esterase protein. Length = 567 Score = 22.6 bits (46), Expect = 3.7 Identities = 11/28 (39%), Positives = 17/28 (60%) Frame = -1 Query: 661 RTGIISFL*SPWKVVPQSLGLGSTPVGL 578 R GI+ FL + +VVP ++GL + L Sbjct: 159 RLGILGFLSTEDEVVPGNMGLKDQSMAL 186 >AY569717-1|AAS86670.1| 397|Apis mellifera complementary sex determiner protein. Length = 397 Score = 21.4 bits (43), Expect = 8.5 Identities = 12/48 (25%), Positives = 20/48 (41%) Frame = -3 Query: 431 VVSPSRRREPDLLCLSVVFRYELESESECASAGQCLYSTVAPIFDDRT 288 ++ R RE + L ++ YEL E G + +P DR+ Sbjct: 44 LIQQEREREHERLMKKMILEYELRRIREIEKLGSERSKSRSPDSRDRS 91 >AY569712-1|AAS86665.1| 408|Apis mellifera complementary sex determiner protein. Length = 408 Score = 21.4 bits (43), Expect = 8.5 Identities = 12/48 (25%), Positives = 20/48 (41%) Frame = -3 Query: 431 VVSPSRRREPDLLCLSVVFRYELESESECASAGQCLYSTVAPIFDDRT 288 ++ R RE + L ++ YEL E G + +P DR+ Sbjct: 44 LIQQEREREHERLMKKMILEYELRRIREIEKLGSERSKSRSPDSRDRS 91 >AY569703-1|AAS86656.1| 396|Apis mellifera complementary sex determiner protein. Length = 396 Score = 21.4 bits (43), Expect = 8.5 Identities = 12/48 (25%), Positives = 20/48 (41%) Frame = -3 Query: 431 VVSPSRRREPDLLCLSVVFRYELESESECASAGQCLYSTVAPIFDDRT 288 ++ R RE + L ++ YEL E G + +P DR+ Sbjct: 44 LIQQEREREHERLMKKMILEYELRRIREIEKLGSERSKSRSPDSRDRS 91 >AY569701-1|AAS86654.1| 407|Apis mellifera complementary sex determiner protein. Length = 407 Score = 21.4 bits (43), Expect = 8.5 Identities = 12/48 (25%), Positives = 20/48 (41%) Frame = -3 Query: 431 VVSPSRRREPDLLCLSVVFRYELESESECASAGQCLYSTVAPIFDDRT 288 ++ R RE + L ++ YEL E G + +P DR+ Sbjct: 44 LIQQEREREHERLMKKMILEYELRRIREIEKLGSERSKSRSPDSRDRS 91 >AY569700-1|AAS86653.1| 407|Apis mellifera complementary sex determiner protein. Length = 407 Score = 21.4 bits (43), Expect = 8.5 Identities = 12/48 (25%), Positives = 20/48 (41%) Frame = -3 Query: 431 VVSPSRRREPDLLCLSVVFRYELESESECASAGQCLYSTVAPIFDDRT 288 ++ R RE + L ++ YEL E G + +P DR+ Sbjct: 44 LIQQEREREHERLMKKMILEYELRRIREIEKLGSERSKSRSPDSRDRS 91 >AY569699-1|AAS86652.1| 396|Apis mellifera complementary sex determiner protein. Length = 396 Score = 21.4 bits (43), Expect = 8.5 Identities = 12/48 (25%), Positives = 20/48 (41%) Frame = -3 Query: 431 VVSPSRRREPDLLCLSVVFRYELESESECASAGQCLYSTVAPIFDDRT 288 ++ R RE + L ++ YEL E G + +P DR+ Sbjct: 44 LIQQEREREHERLMKKMILEYELRRIREIEKLGSERSKSRSPDSRDRS 91 >AY569697-1|AAS86650.1| 413|Apis mellifera complementary sex determiner protein. Length = 413 Score = 21.4 bits (43), Expect = 8.5 Identities = 12/48 (25%), Positives = 20/48 (41%) Frame = -3 Query: 431 VVSPSRRREPDLLCLSVVFRYELESESECASAGQCLYSTVAPIFDDRT 288 ++ R RE + L ++ YEL E G + +P DR+ Sbjct: 44 LIQQEREREHERLMKKMILEYELRRIREIEKLGSERSKSRSPDSRDRS 91 >AB207270-1|BAE72137.1| 429|Apis mellifera broad-complex protein. Length = 429 Score = 21.4 bits (43), Expect = 8.5 Identities = 12/44 (27%), Positives = 22/44 (50%) Frame = +1 Query: 517 HSRIYQKFPKVPLFCCTRAHTTPPVLTPSPATGEQLSKVIKERK 648 H ++ + FP R + P +TP+P T +QL + + R+ Sbjct: 143 HEKLVESFP--------RGGSLPTPVTPTPTTVQQLLRRAQIRR 178 Database: bee Posted date: Oct 23, 2007 1:17 PM Number of letters in database: 146,343 Number of sequences in database: 438 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 227,080 Number of Sequences: 438 Number of extensions: 5363 Number of successful extensions: 33 Number of sequences better than 10.0: 12 Number of HSP's better than 10.0 without gapping: 33 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 33 length of database: 146,343 effective HSP length: 56 effective length of database: 121,815 effective search space used: 21439440 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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