Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brP-0629
         (650 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY146740-1|AAO12100.1|  139|Anopheles gambiae odorant-binding pr...    25   2.7  
AJ271193-1|CAB66001.1| 1623|Anopheles gambiae laminin gamma 1 pr...    25   2.7  
EF117200-1|ABL67437.1|  421|Anopheles gambiae serpin 1 protein.        24   3.6  
DQ974160-1|ABJ52800.1|  235|Anopheles gambiae serpin 1 protein.        24   3.6  
AF492464-1|AAM11657.1|  803|Anopheles gambiae beta nu integrin s...    23   6.3  
AY263177-1|AAP78792.1|  699|Anopheles gambiae TmcC-like protein ...    23   8.4  
AJ439060-3|CAD27754.1| 1645|Anopheles gambiae hypothetical prote...    23   8.4  
AJ438610-11|CAD27483.1|  765|Anopheles gambiae hypothetical prot...    23   8.4  

>AY146740-1|AAO12100.1|  139|Anopheles gambiae odorant-binding
           protein AgamOBP9 protein.
          Length = 139

 Score = 24.6 bits (51), Expect = 2.7
 Identities = 7/15 (46%), Positives = 11/15 (73%)
 Frame = -1

Query: 575 VTCSGRNSDVHICDW 531
           V C+G N+D ++C W
Sbjct: 102 VKCAGSNTDGNVCHW 116


>AJ271193-1|CAB66001.1| 1623|Anopheles gambiae laminin gamma 1
           precursor protein.
          Length = 1623

 Score = 24.6 bits (51), Expect = 2.7
 Identities = 7/14 (50%), Positives = 10/14 (71%)
 Frame = -2

Query: 559 GIATCTSVTGNCDC 518
           GI+ C ++ GNC C
Sbjct: 898 GISICDAINGNCHC 911


>EF117200-1|ABL67437.1|  421|Anopheles gambiae serpin 1 protein.
          Length = 421

 Score = 24.2 bits (50), Expect = 3.6
 Identities = 10/28 (35%), Positives = 13/28 (46%)
 Frame = -2

Query: 595 DRSHGRVLHVAVGIATCTSVTGNCDCFD 512
           D++H R  HVA G    T      D +D
Sbjct: 211 DQTHNRTFHVADGDTVTTEFMRQMDLYD 238


>DQ974160-1|ABJ52800.1|  235|Anopheles gambiae serpin 1 protein.
          Length = 235

 Score = 24.2 bits (50), Expect = 3.6
 Identities = 10/28 (35%), Positives = 13/28 (46%)
 Frame = -2

Query: 595 DRSHGRVLHVAVGIATCTSVTGNCDCFD 512
           D++H R  HVA G    T      D +D
Sbjct: 25  DQTHNRTFHVADGDTVTTEFMRQMDLYD 52


>AF492464-1|AAM11657.1|  803|Anopheles gambiae beta nu integrin
           subunit AgBnu protein.
          Length = 803

 Score = 23.4 bits (48), Expect = 6.3
 Identities = 11/19 (57%), Positives = 11/19 (57%)
 Frame = -2

Query: 559 GIATCTSVTGNCDCFDSSS 503
           GI TC    G C CFDS S
Sbjct: 576 GICTC----GTCSCFDSWS 590


>AY263177-1|AAP78792.1|  699|Anopheles gambiae TmcC-like protein
           protein.
          Length = 699

 Score = 23.0 bits (47), Expect = 8.4
 Identities = 10/29 (34%), Positives = 15/29 (51%)
 Frame = -1

Query: 176 TNTSPSKSSASQGLPPDRNRDSLRKSSEK 90
           TN+    S  +  LPP  +RDS   S ++
Sbjct: 647 TNSQSQASEPTPALPPRADRDSKPSSRDR 675


>AJ439060-3|CAD27754.1| 1645|Anopheles gambiae hypothetical protein
           protein.
          Length = 1645

 Score = 23.0 bits (47), Expect = 8.4
 Identities = 12/24 (50%), Positives = 15/24 (62%), Gaps = 1/24 (4%)
 Frame = -1

Query: 194 LSLREFTNTSPSKSSASQG-LPPD 126
           +S R F NTS S S  S+G + PD
Sbjct: 539 VSRRRFFNTSASSSVTSEGTITPD 562


>AJ438610-11|CAD27483.1|  765|Anopheles gambiae hypothetical protein
           protein.
          Length = 765

 Score = 23.0 bits (47), Expect = 8.4
 Identities = 12/24 (50%), Positives = 15/24 (62%), Gaps = 1/24 (4%)
 Frame = -1

Query: 194 LSLREFTNTSPSKSSASQG-LPPD 126
           +S R F NTS S S  S+G + PD
Sbjct: 540 VSRRRFFNTSASSSVTSEGTITPD 563


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 616,227
Number of Sequences: 2352
Number of extensions: 11431
Number of successful extensions: 26
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 26
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 26
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 64395870
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)