BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= brP-0629 (650 letters) Database: fruitfly 53,049 sequences; 24,988,368 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value BT001388-1|AAN71143.1| 457|Drosophila melanogaster GH04863p pro... 29 4.1 AE014296-802|AAN11595.1| 457|Drosophila melanogaster CG14997-PB... 29 4.1 AE014296-801|AAF47867.1| 457|Drosophila melanogaster CG14997-PA... 29 4.1 AY060778-1|AAL28326.1| 765|Drosophila melanogaster GH24459p pro... 29 5.5 AE013599-2971|AAF57502.2| 765|Drosophila melanogaster CG11048-P... 29 5.5 AE014296-3188|AAF49130.1| 1174|Drosophila melanogaster CG9392-PA... 29 7.2 >BT001388-1|AAN71143.1| 457|Drosophila melanogaster GH04863p protein. Length = 457 Score = 29.5 bits (63), Expect = 4.1 Identities = 12/27 (44%), Positives = 16/27 (59%) Frame = +1 Query: 67 THKHSPLSFSLDFLSESRFRSGGRPCE 147 TH H+P +FS FLS SR + C+ Sbjct: 19 THNHAPTAFSTRFLSTSRVNRERQECQ 45 >AE014296-802|AAN11595.1| 457|Drosophila melanogaster CG14997-PB, isoform B protein. Length = 457 Score = 29.5 bits (63), Expect = 4.1 Identities = 12/27 (44%), Positives = 16/27 (59%) Frame = +1 Query: 67 THKHSPLSFSLDFLSESRFRSGGRPCE 147 TH H+P +FS FLS SR + C+ Sbjct: 19 THNHAPTAFSTRFLSTSRVNRERQECQ 45 >AE014296-801|AAF47867.1| 457|Drosophila melanogaster CG14997-PA, isoform A protein. Length = 457 Score = 29.5 bits (63), Expect = 4.1 Identities = 12/27 (44%), Positives = 16/27 (59%) Frame = +1 Query: 67 THKHSPLSFSLDFLSESRFRSGGRPCE 147 TH H+P +FS FLS SR + C+ Sbjct: 19 THNHAPTAFSTRFLSTSRVNRERQECQ 45 >AY060778-1|AAL28326.1| 765|Drosophila melanogaster GH24459p protein. Length = 765 Score = 29.1 bits (62), Expect = 5.5 Identities = 18/49 (36%), Positives = 28/49 (57%), Gaps = 3/49 (6%) Frame = -1 Query: 152 SASQGLPPDRNRDSLRKSSEKLNGLCLWVG--SLVENLSHCLPS-KEYI 15 SA Q +PP +R+ +R +++ LW G L ++LSH P+ K YI Sbjct: 620 SAEQAMPPSCDRNRVRAAAQLELKRALWNGMDQLNDHLSHINPACKPYI 668 >AE013599-2971|AAF57502.2| 765|Drosophila melanogaster CG11048-PA protein. Length = 765 Score = 29.1 bits (62), Expect = 5.5 Identities = 18/49 (36%), Positives = 28/49 (57%), Gaps = 3/49 (6%) Frame = -1 Query: 152 SASQGLPPDRNRDSLRKSSEKLNGLCLWVG--SLVENLSHCLPS-KEYI 15 SA Q +PP +R+ +R +++ LW G L ++LSH P+ K YI Sbjct: 620 SAEQAMPPSCDRNRVRAAAQLELKRALWNGMDQLNDHLSHINPACKPYI 668 >AE014296-3188|AAF49130.1| 1174|Drosophila melanogaster CG9392-PA protein. Length = 1174 Score = 28.7 bits (61), Expect = 7.2 Identities = 14/48 (29%), Positives = 25/48 (52%) Frame = -1 Query: 224 QLRAAR*SHGLSLREFTNTSPSKSSASQGLPPDRNRDSLRKSSEKLNG 81 +++ R + G+ R+ +TSP + +G PDR + KSS + G Sbjct: 782 KMQFKRQAGGMCSRDPLSTSPERCKPREGSSPDRTIKKIVKSSRQTGG 829 Database: fruitfly Posted date: Oct 23, 2007 1:17 PM Number of letters in database: 24,988,368 Number of sequences in database: 53,049 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 25,854,222 Number of Sequences: 53049 Number of extensions: 499840 Number of successful extensions: 950 Number of sequences better than 10.0: 6 Number of HSP's better than 10.0 without gapping: 936 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 950 length of database: 24,988,368 effective HSP length: 82 effective length of database: 20,638,350 effective search space used: 2765538900 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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