Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brP-0629
         (650 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT001388-1|AAN71143.1|  457|Drosophila melanogaster GH04863p pro...    29   4.1  
AE014296-802|AAN11595.1|  457|Drosophila melanogaster CG14997-PB...    29   4.1  
AE014296-801|AAF47867.1|  457|Drosophila melanogaster CG14997-PA...    29   4.1  
AY060778-1|AAL28326.1|  765|Drosophila melanogaster GH24459p pro...    29   5.5  
AE013599-2971|AAF57502.2|  765|Drosophila melanogaster CG11048-P...    29   5.5  
AE014296-3188|AAF49130.1| 1174|Drosophila melanogaster CG9392-PA...    29   7.2  

>BT001388-1|AAN71143.1|  457|Drosophila melanogaster GH04863p
           protein.
          Length = 457

 Score = 29.5 bits (63), Expect = 4.1
 Identities = 12/27 (44%), Positives = 16/27 (59%)
 Frame = +1

Query: 67  THKHSPLSFSLDFLSESRFRSGGRPCE 147
           TH H+P +FS  FLS SR     + C+
Sbjct: 19  THNHAPTAFSTRFLSTSRVNRERQECQ 45


>AE014296-802|AAN11595.1|  457|Drosophila melanogaster CG14997-PB,
           isoform B protein.
          Length = 457

 Score = 29.5 bits (63), Expect = 4.1
 Identities = 12/27 (44%), Positives = 16/27 (59%)
 Frame = +1

Query: 67  THKHSPLSFSLDFLSESRFRSGGRPCE 147
           TH H+P +FS  FLS SR     + C+
Sbjct: 19  THNHAPTAFSTRFLSTSRVNRERQECQ 45


>AE014296-801|AAF47867.1|  457|Drosophila melanogaster CG14997-PA,
           isoform A protein.
          Length = 457

 Score = 29.5 bits (63), Expect = 4.1
 Identities = 12/27 (44%), Positives = 16/27 (59%)
 Frame = +1

Query: 67  THKHSPLSFSLDFLSESRFRSGGRPCE 147
           TH H+P +FS  FLS SR     + C+
Sbjct: 19  THNHAPTAFSTRFLSTSRVNRERQECQ 45


>AY060778-1|AAL28326.1|  765|Drosophila melanogaster GH24459p
           protein.
          Length = 765

 Score = 29.1 bits (62), Expect = 5.5
 Identities = 18/49 (36%), Positives = 28/49 (57%), Gaps = 3/49 (6%)
 Frame = -1

Query: 152 SASQGLPPDRNRDSLRKSSEKLNGLCLWVG--SLVENLSHCLPS-KEYI 15
           SA Q +PP  +R+ +R +++      LW G   L ++LSH  P+ K YI
Sbjct: 620 SAEQAMPPSCDRNRVRAAAQLELKRALWNGMDQLNDHLSHINPACKPYI 668


>AE013599-2971|AAF57502.2|  765|Drosophila melanogaster CG11048-PA
           protein.
          Length = 765

 Score = 29.1 bits (62), Expect = 5.5
 Identities = 18/49 (36%), Positives = 28/49 (57%), Gaps = 3/49 (6%)
 Frame = -1

Query: 152 SASQGLPPDRNRDSLRKSSEKLNGLCLWVG--SLVENLSHCLPS-KEYI 15
           SA Q +PP  +R+ +R +++      LW G   L ++LSH  P+ K YI
Sbjct: 620 SAEQAMPPSCDRNRVRAAAQLELKRALWNGMDQLNDHLSHINPACKPYI 668


>AE014296-3188|AAF49130.1| 1174|Drosophila melanogaster CG9392-PA
           protein.
          Length = 1174

 Score = 28.7 bits (61), Expect = 7.2
 Identities = 14/48 (29%), Positives = 25/48 (52%)
 Frame = -1

Query: 224 QLRAAR*SHGLSLREFTNTSPSKSSASQGLPPDRNRDSLRKSSEKLNG 81
           +++  R + G+  R+  +TSP +    +G  PDR    + KSS +  G
Sbjct: 782 KMQFKRQAGGMCSRDPLSTSPERCKPREGSSPDRTIKKIVKSSRQTGG 829


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 25,854,222
Number of Sequences: 53049
Number of extensions: 499840
Number of successful extensions: 950
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 936
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 950
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2765538900
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)