Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brP-0625
         (700 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY146719-1|AAO12079.1|  159|Anopheles gambiae odorant-binding pr...    26   1.3  
AF437885-1|AAL84180.1|  157|Anopheles gambiae odorant binding pr...    26   1.3  
AY578812-1|AAT07317.1|  932|Anopheles gambiae wishful thinking p...    25   2.3  
AY534995-1|AAT07393.1|  461|Anopheles gambiae XK-related protein.      24   5.3  

>AY146719-1|AAO12079.1|  159|Anopheles gambiae odorant-binding
           protein AgamOBP2 protein.
          Length = 159

 Score = 25.8 bits (54), Expect = 1.3
 Identities = 16/50 (32%), Positives = 23/50 (46%), Gaps = 2/50 (4%)
 Frame = +3

Query: 261 NC--MTADGDV*KRADIYPPPEHGGVVRSLGR*VLELRQFSGQGVETVGD 404
           NC  +T      +R   YPPPE    +R LG+  LE    S + ++   D
Sbjct: 24  NCSTITTQRPAPRRDGQYPPPETLAFLRPLGKLCLEETGVSPEAIKRFSD 73


>AF437885-1|AAL84180.1|  157|Anopheles gambiae odorant binding
           protein protein.
          Length = 157

 Score = 25.8 bits (54), Expect = 1.3
 Identities = 14/38 (36%), Positives = 19/38 (50%)
 Frame = +3

Query: 291 KRADIYPPPEHGGVVRSLGR*VLELRQFSGQGVETVGD 404
           +R   YPPPE    +R LG+  LE    S + V+   D
Sbjct: 36  RRDGQYPPPETLAFLRPLGKLCLEETGVSPEAVKRFSD 73


>AY578812-1|AAT07317.1|  932|Anopheles gambiae wishful thinking
           protein.
          Length = 932

 Score = 25.0 bits (52), Expect = 2.3
 Identities = 12/30 (40%), Positives = 14/30 (46%), Gaps = 1/30 (3%)
 Frame = +3

Query: 198 HYRYLIYTIRPHLVER-YSISDNCMTADGD 284
           H  +L     P LV   Y +  NC  ADGD
Sbjct: 700 HKNHLAGVTAPSLVRHAYDVQQNCDDADGD 729


>AY534995-1|AAT07393.1|  461|Anopheles gambiae XK-related protein.
          Length = 461

 Score = 23.8 bits (49), Expect = 5.3
 Identities = 7/14 (50%), Positives = 10/14 (71%)
 Frame = +1

Query: 316 LSMVAWCVASDVRC 357
           +  +AWC+AS  RC
Sbjct: 267 MGSIAWCMASHYRC 280


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 562,226
Number of Sequences: 2352
Number of extensions: 9997
Number of successful extensions: 18
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 71086350
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)