BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= brP-0625 (700 letters) Database: mosquito 2352 sequences; 563,979 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value AY146719-1|AAO12079.1| 159|Anopheles gambiae odorant-binding pr... 26 1.3 AF437885-1|AAL84180.1| 157|Anopheles gambiae odorant binding pr... 26 1.3 AY578812-1|AAT07317.1| 932|Anopheles gambiae wishful thinking p... 25 2.3 AY534995-1|AAT07393.1| 461|Anopheles gambiae XK-related protein. 24 5.3 >AY146719-1|AAO12079.1| 159|Anopheles gambiae odorant-binding protein AgamOBP2 protein. Length = 159 Score = 25.8 bits (54), Expect = 1.3 Identities = 16/50 (32%), Positives = 23/50 (46%), Gaps = 2/50 (4%) Frame = +3 Query: 261 NC--MTADGDV*KRADIYPPPEHGGVVRSLGR*VLELRQFSGQGVETVGD 404 NC +T +R YPPPE +R LG+ LE S + ++ D Sbjct: 24 NCSTITTQRPAPRRDGQYPPPETLAFLRPLGKLCLEETGVSPEAIKRFSD 73 >AF437885-1|AAL84180.1| 157|Anopheles gambiae odorant binding protein protein. Length = 157 Score = 25.8 bits (54), Expect = 1.3 Identities = 14/38 (36%), Positives = 19/38 (50%) Frame = +3 Query: 291 KRADIYPPPEHGGVVRSLGR*VLELRQFSGQGVETVGD 404 +R YPPPE +R LG+ LE S + V+ D Sbjct: 36 RRDGQYPPPETLAFLRPLGKLCLEETGVSPEAVKRFSD 73 >AY578812-1|AAT07317.1| 932|Anopheles gambiae wishful thinking protein. Length = 932 Score = 25.0 bits (52), Expect = 2.3 Identities = 12/30 (40%), Positives = 14/30 (46%), Gaps = 1/30 (3%) Frame = +3 Query: 198 HYRYLIYTIRPHLVER-YSISDNCMTADGD 284 H +L P LV Y + NC ADGD Sbjct: 700 HKNHLAGVTAPSLVRHAYDVQQNCDDADGD 729 >AY534995-1|AAT07393.1| 461|Anopheles gambiae XK-related protein. Length = 461 Score = 23.8 bits (49), Expect = 5.3 Identities = 7/14 (50%), Positives = 10/14 (71%) Frame = +1 Query: 316 LSMVAWCVASDVRC 357 + +AWC+AS RC Sbjct: 267 MGSIAWCMASHYRC 280 Database: mosquito Posted date: Oct 23, 2007 1:18 PM Number of letters in database: 563,979 Number of sequences in database: 2352 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 562,226 Number of Sequences: 2352 Number of extensions: 9997 Number of successful extensions: 18 Number of sequences better than 10.0: 4 Number of HSP's better than 10.0 without gapping: 18 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 18 length of database: 563,979 effective HSP length: 62 effective length of database: 418,155 effective search space used: 71086350 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
- SilkBase 1999-2023 -