BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= brP-0622 (750 letters) Database: fruitfly 53,049 sequences; 24,988,368 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value BT012669-1|AAT08475.1| 46|Drosophila melanogaster LD48059p pro... 61 1e-09 L77907-1|AAC37264.1| 1883|Drosophila melanogaster chromodomain-h... 29 8.9 BT011071-1|AAR82736.1| 1645|Drosophila melanogaster SD21488p pro... 29 8.9 AY095050-1|AAM11378.1| 1101|Drosophila melanogaster LD39323p pro... 29 8.9 AE014134-528|AAF51170.1| 1883|Drosophila melanogaster CG3733-PA ... 29 8.9 >BT012669-1|AAT08475.1| 46|Drosophila melanogaster LD48059p protein. Length = 46 Score = 61.3 bits (142), Expect = 1e-09 Identities = 28/38 (73%), Positives = 31/38 (81%) Frame = +3 Query: 168 EHKCWDPKDGELCLVRSXSGETLMEDRSDSDVQIDRRN 281 EH C DPKDGEL L+R SGETLMEDR+ SDVQID +N Sbjct: 9 EHICCDPKDGELYLIRLKSGETLMEDRNSSDVQIDCQN 46 >L77907-1|AAC37264.1| 1883|Drosophila melanogaster chromodomain-helicase-DNA-bindingprotein protein. Length = 1883 Score = 28.7 bits (61), Expect = 8.9 Identities = 9/23 (39%), Positives = 14/23 (60%) Frame = -1 Query: 201 VHHLSGPSICAQSAPSFTDWKRD 133 +HHL GP +C + T W+R+ Sbjct: 573 IHHLYGPFLCVVPLSTMTAWQRE 595 >BT011071-1|AAR82736.1| 1645|Drosophila melanogaster SD21488p protein. Length = 1645 Score = 28.7 bits (61), Expect = 8.9 Identities = 9/23 (39%), Positives = 14/23 (60%) Frame = -1 Query: 201 VHHLSGPSICAQSAPSFTDWKRD 133 +HHL GP +C + T W+R+ Sbjct: 573 IHHLYGPFLCVVPLSTMTAWQRE 595 >AY095050-1|AAM11378.1| 1101|Drosophila melanogaster LD39323p protein. Length = 1101 Score = 28.7 bits (61), Expect = 8.9 Identities = 9/23 (39%), Positives = 14/23 (60%) Frame = -1 Query: 201 VHHLSGPSICAQSAPSFTDWKRD 133 +HHL GP +C + T W+R+ Sbjct: 41 IHHLYGPFLCVVPLSTMTAWQRE 63 >AE014134-528|AAF51170.1| 1883|Drosophila melanogaster CG3733-PA protein. Length = 1883 Score = 28.7 bits (61), Expect = 8.9 Identities = 9/23 (39%), Positives = 14/23 (60%) Frame = -1 Query: 201 VHHLSGPSICAQSAPSFTDWKRD 133 +HHL GP +C + T W+R+ Sbjct: 573 IHHLYGPFLCVVPLSTMTAWQRE 595 Database: fruitfly Posted date: Oct 23, 2007 1:17 PM Number of letters in database: 24,988,368 Number of sequences in database: 53,049 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 31,296,296 Number of Sequences: 53049 Number of extensions: 627140 Number of successful extensions: 987 Number of sequences better than 10.0: 5 Number of HSP's better than 10.0 without gapping: 968 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 987 length of database: 24,988,368 effective HSP length: 83 effective length of database: 20,585,301 effective search space used: 3417159966 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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