Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brP-0618
         (750 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

L36921-1|AAA74593.1|  104|Drosophila melanogaster enhancer of ru...   203   2e-52
BT001470-1|AAN71225.1|  104|Drosophila melanogaster LD03564p pro...   203   2e-52
AE014298-1245|AAF46422.1|  104|Drosophila melanogaster CG1871-PB...   203   2e-52
AE014298-1244|AAF46421.1|  104|Drosophila melanogaster CG1871-PA...   203   2e-52
AE014134-2801|AAF53581.1|  308|Drosophila melanogaster CG6012-PA...    29   6.8  

>L36921-1|AAA74593.1|  104|Drosophila melanogaster enhancer of
           rudimentary protein protein.
          Length = 104

 Score =  203 bits (495), Expect = 2e-52
 Identities = 90/102 (88%), Positives = 96/102 (94%)
 Frame = +1

Query: 13  SHTILLVQPGPRPETRTYSDYESVNDCMEGVCKIYEEHLKRRNPNTPTITYDISQLFDFV 192
           SHTILLVQPG RPETRTY DYESVN+CMEGVCKIYEEHLKRRNPNTPTITYDISQLFDF+
Sbjct: 2   SHTILLVQPGARPETRTYCDYESVNECMEGVCKIYEEHLKRRNPNTPTITYDISQLFDFI 61

Query: 193 DQLADLSCLVYQKSTNTYAPYNKDWIKEKIYVLLRQAAGQSD 318
           D + D+SC+VYQKSTNTYAPYNKDWIKEKIYVLLRQAA  S+
Sbjct: 62  DTMVDISCMVYQKSTNTYAPYNKDWIKEKIYVLLRQAAFSSN 103


>BT001470-1|AAN71225.1|  104|Drosophila melanogaster LD03564p
           protein.
          Length = 104

 Score =  203 bits (495), Expect = 2e-52
 Identities = 90/102 (88%), Positives = 96/102 (94%)
 Frame = +1

Query: 13  SHTILLVQPGPRPETRTYSDYESVNDCMEGVCKIYEEHLKRRNPNTPTITYDISQLFDFV 192
           SHTILLVQPG RPETRTY DYESVN+CMEGVCKIYEEHLKRRNPNTPTITYDISQLFDF+
Sbjct: 2   SHTILLVQPGARPETRTYCDYESVNECMEGVCKIYEEHLKRRNPNTPTITYDISQLFDFI 61

Query: 193 DQLADLSCLVYQKSTNTYAPYNKDWIKEKIYVLLRQAAGQSD 318
           D + D+SC+VYQKSTNTYAPYNKDWIKEKIYVLLRQAA  S+
Sbjct: 62  DTMVDISCMVYQKSTNTYAPYNKDWIKEKIYVLLRQAAFSSN 103


>AE014298-1245|AAF46422.1|  104|Drosophila melanogaster CG1871-PB,
           isoform B protein.
          Length = 104

 Score =  203 bits (495), Expect = 2e-52
 Identities = 90/102 (88%), Positives = 96/102 (94%)
 Frame = +1

Query: 13  SHTILLVQPGPRPETRTYSDYESVNDCMEGVCKIYEEHLKRRNPNTPTITYDISQLFDFV 192
           SHTILLVQPG RPETRTY DYESVN+CMEGVCKIYEEHLKRRNPNTPTITYDISQLFDF+
Sbjct: 2   SHTILLVQPGARPETRTYCDYESVNECMEGVCKIYEEHLKRRNPNTPTITYDISQLFDFI 61

Query: 193 DQLADLSCLVYQKSTNTYAPYNKDWIKEKIYVLLRQAAGQSD 318
           D + D+SC+VYQKSTNTYAPYNKDWIKEKIYVLLRQAA  S+
Sbjct: 62  DTMVDISCMVYQKSTNTYAPYNKDWIKEKIYVLLRQAAFSSN 103


>AE014298-1244|AAF46421.1|  104|Drosophila melanogaster CG1871-PA,
           isoform A protein.
          Length = 104

 Score =  203 bits (495), Expect = 2e-52
 Identities = 90/102 (88%), Positives = 96/102 (94%)
 Frame = +1

Query: 13  SHTILLVQPGPRPETRTYSDYESVNDCMEGVCKIYEEHLKRRNPNTPTITYDISQLFDFV 192
           SHTILLVQPG RPETRTY DYESVN+CMEGVCKIYEEHLKRRNPNTPTITYDISQLFDF+
Sbjct: 2   SHTILLVQPGARPETRTYCDYESVNECMEGVCKIYEEHLKRRNPNTPTITYDISQLFDFI 61

Query: 193 DQLADLSCLVYQKSTNTYAPYNKDWIKEKIYVLLRQAAGQSD 318
           D + D+SC+VYQKSTNTYAPYNKDWIKEKIYVLLRQAA  S+
Sbjct: 62  DTMVDISCMVYQKSTNTYAPYNKDWIKEKIYVLLRQAAFSSN 103


>AE014134-2801|AAF53581.1|  308|Drosophila melanogaster CG6012-PA
           protein.
          Length = 308

 Score = 29.1 bits (62), Expect = 6.8
 Identities = 18/65 (27%), Positives = 29/65 (44%), Gaps = 1/65 (1%)
 Frame = +1

Query: 40  GPRPETRT-YSDYESVNDCMEGVCKIYEEHLKRRNPNTPTITYDISQLFDFVDQLADLSC 216
           G RP  +  + D+ +V    +G+ K Y + L R+N N   I     +L     ++AD   
Sbjct: 39  GTRPTLKERFGDWAAVTGASDGIGKEYAKELARQNINVVLIARTEEKLQAVAKEIADCGA 98

Query: 217 LVYQK 231
            V  K
Sbjct: 99  GVQTK 103


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 30,405,811
Number of Sequences: 53049
Number of extensions: 609718
Number of successful extensions: 1281
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1256
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1281
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3417159966
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)