BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= brP-0618 (750 letters) Database: bee 438 sequences; 146,343 total letters Searching......................................................done Score E Sequences producing significant alignments: (bits) Value DQ000307-1|AAY21180.1| 423|Apis mellifera major royal jelly pro... 23 3.1 DQ435330-1|ABD92645.1| 132|Apis mellifera OBP13 protein. 23 4.0 DQ325130-1|ABD14144.1| 174|Apis mellifera complementary sex det... 22 5.3 DQ325129-1|ABD14143.1| 174|Apis mellifera complementary sex det... 22 5.3 DQ325128-1|ABD14142.1| 174|Apis mellifera complementary sex det... 22 5.3 DQ325127-1|ABD14141.1| 174|Apis mellifera complementary sex det... 22 5.3 DQ325125-1|ABD14139.1| 174|Apis mellifera complementary sex det... 22 5.3 DQ288391-1|ABC41341.1| 630|Apis mellifera vasa protein protein. 22 5.3 AF213012-1|AAG43568.1| 492|Apis mellifera acetylcholinesterase ... 22 5.3 AB181702-1|BAE06051.1| 628|Apis mellifera acetylcholinesterase ... 22 5.3 >DQ000307-1|AAY21180.1| 423|Apis mellifera major royal jelly protein 9 protein. Length = 423 Score = 23.0 bits (47), Expect = 3.1 Identities = 11/40 (27%), Positives = 17/40 (42%) Frame = +1 Query: 127 LKRRNPNTPTITYDISQLFDFVDQLADLSCLVYQKSTNTY 246 LKRRN D Q + + +S +Y++ N Y Sbjct: 333 LKRRNIEIVAKNNDTLQFISGIKIIKQISSNIYERQNNEY 372 >DQ435330-1|ABD92645.1| 132|Apis mellifera OBP13 protein. Length = 132 Score = 22.6 bits (46), Expect = 4.0 Identities = 10/20 (50%), Positives = 12/20 (60%) Frame = +3 Query: 618 SCKIQTRTNSVPASSKKLDC 677 +CK T +NS SSK L C Sbjct: 102 NCKDITESNSCKKSSKLLQC 121 >DQ325130-1|ABD14144.1| 174|Apis mellifera complementary sex determiner protein. Length = 174 Score = 22.2 bits (45), Expect = 5.3 Identities = 8/19 (42%), Positives = 11/19 (57%) Frame = -2 Query: 431 NFSKHNNFSLTVLCYTTMY 375 N+S +NN + LCY Y Sbjct: 90 NYSNYNNNNYKQLCYNINY 108 >DQ325129-1|ABD14143.1| 174|Apis mellifera complementary sex determiner protein. Length = 174 Score = 22.2 bits (45), Expect = 5.3 Identities = 8/19 (42%), Positives = 11/19 (57%) Frame = -2 Query: 431 NFSKHNNFSLTVLCYTTMY 375 N+S +NN + LCY Y Sbjct: 90 NYSNYNNNNYKQLCYNINY 108 >DQ325128-1|ABD14142.1| 174|Apis mellifera complementary sex determiner protein. Length = 174 Score = 22.2 bits (45), Expect = 5.3 Identities = 8/19 (42%), Positives = 11/19 (57%) Frame = -2 Query: 431 NFSKHNNFSLTVLCYTTMY 375 N+S +NN + LCY Y Sbjct: 90 NYSNYNNNNYKQLCYNINY 108 >DQ325127-1|ABD14141.1| 174|Apis mellifera complementary sex determiner protein. Length = 174 Score = 22.2 bits (45), Expect = 5.3 Identities = 8/19 (42%), Positives = 11/19 (57%) Frame = -2 Query: 431 NFSKHNNFSLTVLCYTTMY 375 N+S +NN + LCY Y Sbjct: 90 NYSNYNNNNYKQLCYNINY 108 >DQ325125-1|ABD14139.1| 174|Apis mellifera complementary sex determiner protein. Length = 174 Score = 22.2 bits (45), Expect = 5.3 Identities = 8/19 (42%), Positives = 11/19 (57%) Frame = -2 Query: 431 NFSKHNNFSLTVLCYTTMY 375 N+S +NN + LCY Y Sbjct: 90 NYSNYNNNNYKQLCYNINY 108 >DQ288391-1|ABC41341.1| 630|Apis mellifera vasa protein protein. Length = 630 Score = 22.2 bits (45), Expect = 5.3 Identities = 10/17 (58%), Positives = 12/17 (70%) Frame = +3 Query: 468 FISEVQHLALLFM*NHL 518 F EVQHLA F+ N+L Sbjct: 392 FPDEVQHLARRFLNNYL 408 >AF213012-1|AAG43568.1| 492|Apis mellifera acetylcholinesterase protein. Length = 492 Score = 22.2 bits (45), Expect = 5.3 Identities = 9/22 (40%), Positives = 14/22 (63%) Frame = +3 Query: 600 FVVFLISCKIQTRTNSVPASSK 665 F + L SC +R N+VP+S + Sbjct: 9 FFLLLSSCTRPSRGNAVPSSQR 30 >AB181702-1|BAE06051.1| 628|Apis mellifera acetylcholinesterase protein. Length = 628 Score = 22.2 bits (45), Expect = 5.3 Identities = 9/22 (40%), Positives = 14/22 (63%) Frame = +3 Query: 600 FVVFLISCKIQTRTNSVPASSK 665 F + L SC +R N+VP+S + Sbjct: 9 FFLLLSSCTRPSRGNAVPSSQR 30 Database: bee Posted date: Oct 23, 2007 1:17 PM Number of letters in database: 146,343 Number of sequences in database: 438 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 201,256 Number of Sequences: 438 Number of extensions: 4034 Number of successful extensions: 17 Number of sequences better than 10.0: 10 Number of HSP's better than 10.0 without gapping: 16 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 17 length of database: 146,343 effective HSP length: 56 effective length of database: 121,815 effective search space used: 23510295 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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