Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brP-0617
         (539 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292377-1|CAL23189.2|  358|Tribolium castaneum gustatory recept...    23   1.3  
AM292342-1|CAL23154.2|  386|Tribolium castaneum gustatory recept...    23   1.3  
AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosin...    22   3.0  
AM292359-1|CAL23171.2|  436|Tribolium castaneum gustatory recept...    22   4.0  
AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ...    21   6.9  
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ...    21   6.9  
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ...    21   6.9  
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ...    21   6.9  

>AM292377-1|CAL23189.2|  358|Tribolium castaneum gustatory receptor
           candidate 56 protein.
          Length = 358

 Score = 23.4 bits (48), Expect = 1.3
 Identities = 12/23 (52%), Positives = 16/23 (69%)
 Frame = -1

Query: 497 YLNLDRILYDRYQLINNIEQTLV 429
           YLN+ R+   RYQL+N   +TLV
Sbjct: 201 YLNILRV---RYQLLNEYLETLV 220


>AM292342-1|CAL23154.2|  386|Tribolium castaneum gustatory receptor
           candidate 21 protein.
          Length = 386

 Score = 23.4 bits (48), Expect = 1.3
 Identities = 12/23 (52%), Positives = 16/23 (69%)
 Frame = -1

Query: 497 YLNLDRILYDRYQLINNIEQTLV 429
           YLN+ R+   RYQL+N   +TLV
Sbjct: 201 YLNILRV---RYQLLNEYLETLV 220


>AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosine
           kinase Torso-likeprotein protein.
          Length = 803

 Score = 22.2 bits (45), Expect = 3.0
 Identities = 13/25 (52%), Positives = 16/25 (64%)
 Frame = -1

Query: 467 RYQLINNIEQTLVNH*KKLVIQCKI 393
           +Y  I N+EQTL NH  K VI  +I
Sbjct: 757 QYLQIENVEQTL-NHEIKKVIPGRI 780


>AM292359-1|CAL23171.2|  436|Tribolium castaneum gustatory receptor
           candidate 38 protein.
          Length = 436

 Score = 21.8 bits (44), Expect = 4.0
 Identities = 9/17 (52%), Positives = 12/17 (70%)
 Frame = -3

Query: 252 THIQSSSSEIIQMV*YC 202
           THI  +  +IIQ+V YC
Sbjct: 203 THITMAHFKIIQVVPYC 219


>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
           variant 2 protein.
          Length = 1558

 Score = 21.0 bits (42), Expect = 6.9
 Identities = 11/23 (47%), Positives = 14/23 (60%)
 Frame = -2

Query: 139 KCLSNRMSVLIINVFENGIVFFF 71
           KCL   +SVL I + + G V FF
Sbjct: 306 KCLLFFVSVLFILLVKEGEVAFF 328


>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
           variant 1 protein.
          Length = 1558

 Score = 21.0 bits (42), Expect = 6.9
 Identities = 11/23 (47%), Positives = 14/23 (60%)
 Frame = -2

Query: 139 KCLSNRMSVLIINVFENGIVFFF 71
           KCL   +SVL I + + G V FF
Sbjct: 306 KCLLFFVSVLFILLVKEGEVAFF 328


>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase
           CHS1B protein.
          Length = 1558

 Score = 21.0 bits (42), Expect = 6.9
 Identities = 11/23 (47%), Positives = 14/23 (60%)
 Frame = -2

Query: 139 KCLSNRMSVLIINVFENGIVFFF 71
           KCL   +SVL I + + G V FF
Sbjct: 306 KCLLFFVSVLFILLVKEGEVAFF 328


>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase
           CHS1A protein.
          Length = 1558

 Score = 21.0 bits (42), Expect = 6.9
 Identities = 11/23 (47%), Positives = 14/23 (60%)
 Frame = -2

Query: 139 KCLSNRMSVLIINVFENGIVFFF 71
           KCL   +SVL I + + G V FF
Sbjct: 306 KCLLFFVSVLFILLVKEGEVAFF 328


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 104,590
Number of Sequences: 336
Number of extensions: 2073
Number of successful extensions: 8
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 13201902
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)