Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brP-0615
(700 letters)
Database: tribolium
336 sequences; 122,585 total letters
Searching.......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AJ005083-1|CAB65469.1| 585|Tribolium castaneum signal receptor ... 28 0.084
DQ490059-1|ABF22614.1| 947|Tribolium castaneum short gastrulati... 21 7.3
AY873916-1|AAW67572.1| 377|Tribolium castaneum chitinase 6 prot... 21 7.3
AY362543-1|AAQ63455.1| 677|Tribolium castaneum chitin synthase ... 21 7.3
AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ... 21 7.3
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ... 21 7.3
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ... 21 7.3
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ... 21 7.3
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ... 21 7.3
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ... 21 7.3
AY043292-1|AAK96031.1| 323|Tribolium castaneum homeodomain tran... 21 9.7
AF263514-1|AAF74206.1| 127|Tribolium castaneum cytochrome P450 ... 21 9.7
>AJ005083-1|CAB65469.1| 585|Tribolium castaneum signal receptor
protein protein.
Length = 585
Score = 27.9 bits (59), Expect = 0.084
Identities = 14/46 (30%), Positives = 20/46 (43%)
Frame = +3
Query: 357 CSAGRVCEINEHGDAMCNCIKDCPYETDSRRMVCTNFNETWQSDCE 494
C G VC I++ G +C DCP T+ NE + C+
Sbjct: 385 CQNGGVCRISDGGGYIC----DCPSGTNGTNCEIDTINECDSNPCK 426
>DQ490059-1|ABF22614.1| 947|Tribolium castaneum short gastrulation
protein.
Length = 947
Score = 21.4 bits (43), Expect = 7.3
Identities = 9/15 (60%), Positives = 11/15 (73%)
Frame = +3
Query: 231 SLDEKRYHEAEIARV 275
SLDEK+Y E+ RV
Sbjct: 334 SLDEKKYILQEVVRV 348
>AY873916-1|AAW67572.1| 377|Tribolium castaneum chitinase 6
protein.
Length = 377
Score = 21.4 bits (43), Expect = 7.3
Identities = 8/31 (25%), Positives = 17/31 (54%)
Frame = +1
Query: 529 LISGRGPQYHHVQIEYYGTCREMPDCTESEM 621
++SG PQ + I +YG + D ++ ++
Sbjct: 241 ILSGADPQKLAIGIAFYGHAFTLVDASQHDL 271
>AY362543-1|AAQ63455.1| 677|Tribolium castaneum chitin synthase
protein.
Length = 677
Score = 21.4 bits (43), Expect = 7.3
Identities = 16/56 (28%), Positives = 20/56 (35%)
Frame = +1
Query: 349 KSTAAQDVSAKSTNTETPCVTASRTVPTRQTPDAWCAQTSTKPGNRIAKYTASDAY 516
+ A D S T T A V Q D W + G R+ ASDA+
Sbjct: 549 RGKALMDKSVMKKYT-TRSTQAKHYVQYDQGEDRWLCTLLLQRGYRVEYSAASDAF 603
>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
variant 2 protein.
Length = 1558
Score = 21.4 bits (43), Expect = 7.3
Identities = 10/27 (37%), Positives = 12/27 (44%)
Frame = +1
Query: 436 QTPDAWCAQTSTKPGNRIAKYTASDAY 516
Q D W + G R+ ASDAY
Sbjct: 837 QGEDRWLCTLLLQRGYRVEYSAASDAY 863
>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
variant 1 protein.
Length = 1558
Score = 21.4 bits (43), Expect = 7.3
Identities = 10/27 (37%), Positives = 12/27 (44%)
Frame = +1
Query: 436 QTPDAWCAQTSTKPGNRIAKYTASDAY 516
Q D W + G R+ ASDAY
Sbjct: 837 QGEDRWLCTLLLQRGYRVEYSAASDAY 863
>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
protein.
Length = 1464
Score = 21.4 bits (43), Expect = 7.3
Identities = 16/56 (28%), Positives = 20/56 (35%)
Frame = +1
Query: 349 KSTAAQDVSAKSTNTETPCVTASRTVPTRQTPDAWCAQTSTKPGNRIAKYTASDAY 516
+ A D S T T A V Q D W + G R+ ASDA+
Sbjct: 782 RGKALMDKSVMKKYT-TRSTQAKHYVQYDQGEDRWLCTLLLQRGYRVEYSAASDAF 836
>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase
CHS2 protein.
Length = 1464
Score = 21.4 bits (43), Expect = 7.3
Identities = 16/56 (28%), Positives = 20/56 (35%)
Frame = +1
Query: 349 KSTAAQDVSAKSTNTETPCVTASRTVPTRQTPDAWCAQTSTKPGNRIAKYTASDAY 516
+ A D S T T A V Q D W + G R+ ASDA+
Sbjct: 782 RGKALMDKSVMKKYT-TRSTQAKHYVQYDQGEDRWLCTLLLQRGYRVEYSAASDAF 836
>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase
CHS1B protein.
Length = 1558
Score = 21.4 bits (43), Expect = 7.3
Identities = 10/27 (37%), Positives = 12/27 (44%)
Frame = +1
Query: 436 QTPDAWCAQTSTKPGNRIAKYTASDAY 516
Q D W + G R+ ASDAY
Sbjct: 837 QGEDRWLCTLLLQRGYRVEYSAASDAY 863
>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase
CHS1A protein.
Length = 1558
Score = 21.4 bits (43), Expect = 7.3
Identities = 10/27 (37%), Positives = 12/27 (44%)
Frame = +1
Query: 436 QTPDAWCAQTSTKPGNRIAKYTASDAY 516
Q D W + G R+ ASDAY
Sbjct: 837 QGEDRWLCTLLLQRGYRVEYSAASDAY 863
>AY043292-1|AAK96031.1| 323|Tribolium castaneum homeodomain
transcription factor Prothoraxlessprotein.
Length = 323
Score = 21.0 bits (42), Expect = 9.7
Identities = 7/14 (50%), Positives = 8/14 (57%)
Frame = -2
Query: 90 PRSXGPTQEDPSSC 49
P+ G Q DP SC
Sbjct: 37 PQGGGAVQPDPGSC 50
>AF263514-1|AAF74206.1| 127|Tribolium castaneum cytochrome P450
monooxygenase protein.
Length = 127
Score = 21.0 bits (42), Expect = 9.7
Identities = 10/22 (45%), Positives = 13/22 (59%)
Frame = +2
Query: 464 LQRNLAIGLRSIPPAMLMPRQL 529
L+R L LR PP ++ RQL
Sbjct: 48 LERCLMETLRMFPPVPIIARQL 69
Database: tribolium
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 122,585
Number of sequences in database: 336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 152,592
Number of Sequences: 336
Number of extensions: 3045
Number of successful extensions: 12
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18426585
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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