BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= brP-0615 (700 letters) Database: rice 37,544 sequences; 14,793,348 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value 08_01_0961 - 9622444-9622928,9623011-9623102,9623862-9624002,962... 32 0.50 03_06_0537 + 34585339-34585581,34585668-34585862,34585964-34586845 30 1.5 04_03_0582 + 17528335-17529790,17529913-17531651,17531814-175320... 29 2.7 12_01_0423 + 3337401-3337419,3337777-3338235,3338650-3338735,333... 29 3.5 10_08_0486 - 18239351-18239592,18240893-18240984,18241279-182413... 29 3.5 09_04_0330 + 16731390-16731699,16731774-16732080,16732182-167335... 29 3.5 03_02_0520 + 9092020-9092079,9092253-9093047 29 4.7 11_06_0344 + 22540436-22540737,22541304-22543545 28 6.2 11_01_0014 + 108647-108816,109704-109803,109891-110018,110232-11... 28 6.2 04_01_0423 - 5597068-5597109,5597181-5597309,5597490-5598431 28 6.2 12_02_0318 - 17457182-17462232,17462745-17462955,17463356-174634... 28 8.2 12_01_0797 + 7300370-7300506,7300682-7300798,7301903-7302443,730... 28 8.2 06_01_0985 - 7646772-7647451,7647957-7648107 28 8.2 05_06_0246 + 26656629-26656907,26657001-26657228,26657595-266576... 28 8.2 01_06_1411 + 37127098-37128279 28 8.2 >08_01_0961 - 9622444-9622928,9623011-9623102,9623862-9624002, 9624460-9624506,9624581-9624639,9624780-9624940, 9625021-9625196,9625284-9625355,9625820-9625879, 9625997-9626191 Length = 495 Score = 31.9 bits (69), Expect = 0.50 Identities = 19/73 (26%), Positives = 31/73 (42%), Gaps = 1/73 (1%) Frame = +2 Query: 464 LQRNLAIGLRSIPPAMLMPRQL*SVAVVRNTTTFKSSITERA-EKCLTALKARCLTSPVA 640 L + + +R +P + L + V + R K+S++ + C L C S Sbjct: 276 LTKRSEVPVRILPSSYLSLPLMSIVKIARECGWRKTSVSSVCHDPCAICLDTECTVSAEG 335 Query: 641 CGTGFLTSCATWL 679 CG F T CA +L Sbjct: 336 CGHEFCTKCALYL 348 >03_06_0537 + 34585339-34585581,34585668-34585862,34585964-34586845 Length = 439 Score = 30.3 bits (65), Expect = 1.5 Identities = 19/64 (29%), Positives = 26/64 (40%), Gaps = 2/64 (3%) Frame = -3 Query: 305 FIRDLVEKVVNSGY--FCLMVSLLVQALRHSVLDVFSLRDVPAAELLRRWTFSSRGADPA 132 F+ D + SG+ + LM+ ALR +V F L R W FS G P Sbjct: 9 FVVDCGRTIFFSGFNAYWLMMMAADPALRGAVATAFQQASAHGLNLARTWAFSDGGDQPL 68 Query: 131 VPTP 120 +P Sbjct: 69 QSSP 72 >04_03_0582 + 17528335-17529790,17529913-17531651,17531814-17532035, 17532062-17533525 Length = 1626 Score = 29.5 bits (63), Expect = 2.7 Identities = 13/40 (32%), Positives = 23/40 (57%), Gaps = 1/40 (2%) Frame = +2 Query: 536 VAVVRNTTTFKSSITERAEK-CLTALKARCLTSPVACGTG 652 + +RN + + S+ E + C++ K + LT+PVA G G Sbjct: 397 IPAIRNLNSHQESLEESSSADCISPTKRKALTAPVAKGLG 436 >12_01_0423 + 3337401-3337419,3337777-3338235,3338650-3338735, 3338974-3339022,3339225-3339533,3339555-3339710, 3339871-3340086,3340404-3340906,3341050-3341116, 3341215-3341272,3341561-3341699,3341840-3341956, 3342069-3342246,3342459-3343093 Length = 996 Score = 29.1 bits (62), Expect = 3.5 Identities = 13/34 (38%), Positives = 20/34 (58%) Frame = +1 Query: 415 SRTVPTRQTPDAWCAQTSTKPGNRIAKYTASDAY 516 +R P QTPDA A + T+P ++ +A +AY Sbjct: 380 TRIQPYTQTPDADSATSGTQPAAKLNSISAMEAY 413 >10_08_0486 - 18239351-18239592,18240893-18240984,18241279-18241364, 18241442-18241643,18241743-18241960,18242524-18242640 Length = 318 Score = 29.1 bits (62), Expect = 3.5 Identities = 15/60 (25%), Positives = 26/60 (43%) Frame = +1 Query: 409 TASRTVPTRQTPDAWCAQTSTKPGNRIAKYTASDAYASTTLISGRGPQYHHVQIEYYGTC 588 TASR+ D W + +R T+ D+ + ISG ++ H+ E++ C Sbjct: 109 TASRSFGEDNGMDYWSDDEDNEKMSRSWSSTSEDSLFNCDAISGNRKRHGHMYFEFFEVC 168 >09_04_0330 + 16731390-16731699,16731774-16732080,16732182-16733561, 16734064-16734112 Length = 681 Score = 29.1 bits (62), Expect = 3.5 Identities = 14/45 (31%), Positives = 21/45 (46%) Frame = +3 Query: 348 KVHCSAGRVCEINEHGDAMCNCIKDCPYETDSRRMVCTNFNETWQ 482 K +A VCE + G+ + +C + D RM C + E WQ Sbjct: 602 KEEAAAAAVCEGSGGGERVVDCACGA-VDDDGERMACCDICEAWQ 645 >03_02_0520 + 9092020-9092079,9092253-9093047 Length = 284 Score = 28.7 bits (61), Expect = 4.7 Identities = 10/24 (41%), Positives = 18/24 (75%) Frame = -3 Query: 218 VLDVFSLRDVPAAELLRRWTFSSR 147 VLD+ +++ +PA +L+RWT +R Sbjct: 138 VLDLMNIKSLPAQYILKRWTREAR 161 >11_06_0344 + 22540436-22540737,22541304-22543545 Length = 847 Score = 28.3 bits (60), Expect = 6.2 Identities = 11/25 (44%), Positives = 15/25 (60%) Frame = +2 Query: 560 TFKSSITERAEKCLTALKARCLTSP 634 T +S ERAE+C + L RC+ P Sbjct: 299 TLQSGFEERAEECFSQLVQRCIIRP 323 >11_01_0014 + 108647-108816,109704-109803,109891-110018,110232-110394, 110491-110603,111080-111118,111319-111402,111486-111534, 111624-111715,111999-112128,112225-112301,112377-113995, 114348-114545,114635-115173 Length = 1166 Score = 28.3 bits (60), Expect = 6.2 Identities = 13/48 (27%), Positives = 26/48 (54%) Frame = +1 Query: 334 KTLA*KSTAAQDVSAKSTNTETPCVTASRTVPTRQTPDAWCAQTSTKP 477 +T A ++Q ++ T+ ++ ++S TV + + P +W TST P Sbjct: 390 RTTATGVASSQSLTKSKTDPQSNSFSSSSTVSSTKLPSSWNDDTSTVP 437 >04_01_0423 - 5597068-5597109,5597181-5597309,5597490-5598431 Length = 370 Score = 28.3 bits (60), Expect = 6.2 Identities = 15/45 (33%), Positives = 26/45 (57%) Frame = -3 Query: 281 VVNSGYFCLMVSLLVQALRHSVLDVFSLRDVPAAELLRRWTFSSR 147 + + G F + L AL+ VLD+ ++ +PA +L+RWT +R Sbjct: 177 ICSCGQFNRIGILCGHALK--VLDLMNIESLPAQYILKRWTREAR 219 >12_02_0318 - 17457182-17462232,17462745-17462955,17463356-17463403, 17466161-17466346 Length = 1831 Score = 27.9 bits (59), Expect = 8.2 Identities = 17/54 (31%), Positives = 26/54 (48%), Gaps = 6/54 (11%) Frame = -3 Query: 404 HGVSVFVDFADTSCAAVDF------QARVFHVDFFVFILFIRDLVEKVVNSGYF 261 HG+ V +FAD S V++ + V+ F + FIR+L E + S F Sbjct: 984 HGIGVQFEFADASVHIVNYLMSKSSNGALSRVNMFAMLQFIRNLTENNLTSVNF 1037 >12_01_0797 + 7300370-7300506,7300682-7300798,7301903-7302443, 7302885-7304042,7304133-7304291,7304397-7304504, 7305045-7305304,7305936-7306101,7307025-7307050, 7307318-7307402,7307486-7307695,7308815-7308872, 7308964-7309037,7309323-7309373,7309576-7309664, 7310027-7310104,7310164-7310269 Length = 1140 Score = 27.9 bits (59), Expect = 8.2 Identities = 14/41 (34%), Positives = 24/41 (58%) Frame = -3 Query: 269 GYFCLMVSLLVQALRHSVLDVFSLRDVPAAELLRRWTFSSR 147 G F L AL+ VLD+ +++ +P+ +L+RWT +R Sbjct: 484 GMFSRTGILCAHALK--VLDLMNIKSLPSQYVLKRWTRGAR 522 >06_01_0985 - 7646772-7647451,7647957-7648107 Length = 276 Score = 27.9 bits (59), Expect = 8.2 Identities = 10/24 (41%), Positives = 17/24 (70%) Frame = -3 Query: 218 VLDVFSLRDVPAAELLRRWTFSSR 147 VLDV +++ +P +L+RWT +R Sbjct: 240 VLDVMNIKSLPKRYILKRWTREAR 263 >05_06_0246 + 26656629-26656907,26657001-26657228,26657595-26657630, 26658362-26658475,26658562-26659167 Length = 420 Score = 27.9 bits (59), Expect = 8.2 Identities = 13/27 (48%), Positives = 16/27 (59%) Frame = -1 Query: 241 SSKLSDIPCSMCSASEMSPRPSCSDVG 161 S+ SD PC + SAS S P+ SD G Sbjct: 310 SASSSDFPCDVSSASTSSATPARSDGG 336 >01_06_1411 + 37127098-37128279 Length = 393 Score = 27.9 bits (59), Expect = 8.2 Identities = 18/49 (36%), Positives = 30/49 (61%) Frame = +2 Query: 410 LHQGLSLRDRLQTHGVHKLQRNLAIGLRSIPPAMLMPRQL*SVAVVRNT 556 LH SLR L++ H+L+R+ LR++P + +P ++ S AVV N+ Sbjct: 128 LHLDPSLRRALRSW--HRLRRHDPGVLRNLPSLLSLPGRIPSCAVVGNS 174 Database: rice Posted date: Oct 4, 2007 10:57 AM Number of letters in database: 14,793,348 Number of sequences in database: 37,544 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 19,525,365 Number of Sequences: 37544 Number of extensions: 393570 Number of successful extensions: 1154 Number of sequences better than 10.0: 15 Number of HSP's better than 10.0 without gapping: 1127 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1154 length of database: 14,793,348 effective HSP length: 80 effective length of database: 11,789,828 effective search space used: 1792053856 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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