Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brP-0615
(700 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_36847| Best HMM Match : No HMM Matches (HMM E-Value=.) 46 2e-05
SB_59417| Best HMM Match : No HMM Matches (HMM E-Value=.) 42 6e-04
SB_7591| Best HMM Match : No HMM Matches (HMM E-Value=.) 41 8e-04
SB_43077| Best HMM Match : No HMM Matches (HMM E-Value=.) 40 0.002
SB_7030| Best HMM Match : Kazal_2 (HMM E-Value=4.6e-08) 40 0.002
SB_51009| Best HMM Match : 7tm_1 (HMM E-Value=2.8e-14) 40 0.003
SB_9563| Best HMM Match : Kazal_1 (HMM E-Value=1.7e-07) 39 0.004
SB_6686| Best HMM Match : Kazal_1 (HMM E-Value=0) 38 0.010
SB_6080| Best HMM Match : No HMM Matches (HMM E-Value=.) 38 0.010
SB_45722| Best HMM Match : No HMM Matches (HMM E-Value=.) 37 0.018
SB_13131| Best HMM Match : No HMM Matches (HMM E-Value=.) 37 0.018
SB_56344| Best HMM Match : Kazal_2 (HMM E-Value=1.5e-09) 36 0.024
SB_53017| Best HMM Match : Kazal_1 (HMM E-Value=0) 36 0.032
SB_28600| Best HMM Match : EGF_CA (HMM E-Value=4.2e-40) 35 0.073
SB_15403| Best HMM Match : CH (HMM E-Value=0) 35 0.073
SB_30470| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.13
SB_17430| Best HMM Match : Kazal_1 (HMM E-Value=1e-07) 31 0.68
SB_1345| Best HMM Match : IBN_N (HMM E-Value=0.84) 30 1.6
SB_2244| Best HMM Match : zf-CCCH (HMM E-Value=0.004) 30 2.1
SB_46203| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.7
SB_34889| Best HMM Match : zf-C2H2 (HMM E-Value=0) 29 2.7
SB_18275| Best HMM Match : Kazal_1 (HMM E-Value=0) 29 2.7
SB_35516| Best HMM Match : Kazal_1 (HMM E-Value=0) 29 2.7
SB_22648| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.7
SB_29786| Best HMM Match : I-set (HMM E-Value=0) 29 3.6
SB_16945| Best HMM Match : SecA_SW (HMM E-Value=9.3e-39) 29 3.6
SB_33509| Best HMM Match : Kazal_1 (HMM E-Value=2.3e-26) 29 3.6
SB_42767| Best HMM Match : Thyroglobulin_1 (HMM E-Value=0) 29 4.8
SB_38165| Best HMM Match : Drf_FH1 (HMM E-Value=1) 29 4.8
SB_40330| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.3
SB_36387| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.4
SB_13864| Best HMM Match : FtsX (HMM E-Value=1.6) 28 8.4
>SB_36847| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 344
Score = 46.4 bits (105), Expect = 2e-05
Identities = 21/59 (35%), Positives = 32/59 (54%)
Frame = +3
Query: 339 PCLKVHCSAGRVCEINEHGDAMCNCIKDCPYETDSRRMVCTNFNETWQSDCEVYRQRCL 515
PC V C AG+ C + G A C C+ +CP D + VC + T+ + CE++R C+
Sbjct: 58 PCSNVFCHAGQEC-VAAKGKASCECLSECP---DHIKPVCGSDGVTYPNHCELHRIACV 112
>SB_59417| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1822
Score = 41.5 bits (93), Expect = 6e-04
Identities = 22/60 (36%), Positives = 28/60 (46%), Gaps = 1/60 (1%)
Frame = +3
Query: 339 PCLKVHCS-AGRVCEINEHGDAMCNCIKDCPYETDSRRMVCTNFNETWQSDCEVYRQRCL 515
PC + CS G C IN G A C C C S R+ C + T+ S CE+ + CL
Sbjct: 24 PCSEKTCSNQGEECVINSFGMAECRCTSTCSPAQPSDRL-CASDGITYNSKCELNKTACL 82
>SB_7591| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 3261
Score = 41.1 bits (92), Expect = 8e-04
Identities = 22/60 (36%), Positives = 35/60 (58%), Gaps = 1/60 (1%)
Frame = +3
Query: 339 PCLKVHCSAG-RVCEINEHGDAMCNCIKDCPYETDSRRMVCTNFNETWQSDCEVYRQRCL 515
PC CSA CE+ ++ +A+C C KDCP E D+ VC +T+ ++C + +Q C+
Sbjct: 1766 PCQNFICSAPYSSCEVKDN-EAVCECPKDCPKE-DAE--VCGTNWKTYTNECMMRKQACM 1821
Score = 37.1 bits (82), Expect = 0.014
Identities = 20/59 (33%), Positives = 27/59 (45%), Gaps = 1/59 (1%)
Frame = +3
Query: 339 PCLKVHCS-AGRVCEINEHGDAMCNCIKDCPYETDSRRMVCTNFNETWQSDCEVYRQRC 512
PC + C G VC + C C CP S+R VC + T+ S CE++R C
Sbjct: 2977 PCERYKCRYQGEVCVTDSRNVPRCVCPPGCPPAEVSQR-VCASDGLTYPSVCEMHRTAC 3034
Score = 32.7 bits (71), Expect = 0.29
Identities = 17/60 (28%), Positives = 30/60 (50%), Gaps = 2/60 (3%)
Frame = +3
Query: 339 PCLKVHCSAGRV--CEINEHGDAMCNCIKDCPYETDSRRMVCTNFNETWQSDCEVYRQRC 512
PC +CS+ C+ + G A C C +DCP + + VC + N + ++C + + C
Sbjct: 1348 PCEGFNCSSPPYSSCQAKD-GKATCECSEDCP---KTLKPVCGSDNNDYDNECLMQARAC 1403
Score = 31.5 bits (68), Expect = 0.68
Identities = 17/59 (28%), Positives = 26/59 (44%), Gaps = 1/59 (1%)
Frame = +3
Query: 339 PCLKVHC-SAGRVCEINEHGDAMCNCIKDCPYETDSRRMVCTNFNETWQSDCEVYRQRC 512
PC++ C S GD+ CI CP ++ +C + N T+ S C + R C
Sbjct: 1836 PCVRYDCGSTNPYSTCKPKGDSGFECI--CPTCPKAKDYLCASNNLTYMSKCHLERASC 1892
Score = 29.9 bits (64), Expect = 2.1
Identities = 17/48 (35%), Positives = 26/48 (54%), Gaps = 1/48 (2%)
Frame = +3
Query: 375 CEINEH-GDAMCNCIKDCPYETDSRRMVCTNFNETWQSDCEVYRQRCL 515
CE ++ G C C DC ++D VC + N T+ S+C++ R CL
Sbjct: 206 CEADKSSGVITCKC-PDCKDKSDP---VCGSDNVTYASECQLRRAACL 249
Score = 29.5 bits (63), Expect = 2.7
Identities = 15/60 (25%), Positives = 28/60 (46%), Gaps = 1/60 (1%)
Frame = +3
Query: 339 PCLKVHCSAGRVCEINE-HGDAMCNCIKDCPYETDSRRMVCTNFNETWQSDCEVYRQRCL 515
PC V+C++ +C C ++C D VC + N T+ ++C + +Q C+
Sbjct: 1181 PCKDVNCTSPPYSSCRPLDNKPVCACPENCSSTVDP---VCGSDNNTYDNECLMRQQACV 1237
Score = 29.1 bits (62), Expect = 3.6
Identities = 15/60 (25%), Positives = 27/60 (45%), Gaps = 1/60 (1%)
Frame = +3
Query: 339 PCLKVHCSAGRVCEINE-HGDAMCNCIKDCPYETDSRRMVCTNFNETWQSDCEVYRQRCL 515
PC V+C++ +C C ++C D VC N T+ ++C + +Q C+
Sbjct: 1110 PCKDVNCTSPPYSSCRPLDNKPVCACPENCSSTVDP---VCGTDNNTYDNECLMRQQACV 1166
Score = 29.1 bits (62), Expect = 3.6
Identities = 10/37 (27%), Positives = 22/37 (59%)
Frame = +3
Query: 402 MCNCIKDCPYETDSRRMVCTNFNETWQSDCEVYRQRC 512
+C+C DC ET + +C + +T+ ++C + ++ C
Sbjct: 2151 VCSCPDDCTNET---KPICASDGQTYDNECLMQKRAC 2184
>SB_43077| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1149
Score = 39.9 bits (89), Expect = 0.002
Identities = 20/58 (34%), Positives = 25/58 (43%)
Frame = +3
Query: 339 PCLKVHCSAGRVCEINEHGDAMCNCIKDCPYETDSRRMVCTNFNETWQSDCEVYRQRC 512
PCL V C CE DA C C + CP D VC ET+ + C + + C
Sbjct: 302 PCLNVTCDYFAECEAFAADDAQCVCPRKCPSYVD---QVCATNGETFDNLCRLKKHVC 356
>SB_7030| Best HMM Match : Kazal_2 (HMM E-Value=4.6e-08)
Length = 286
Score = 39.9 bits (89), Expect = 0.002
Identities = 20/58 (34%), Positives = 25/58 (43%)
Frame = +3
Query: 339 PCLKVHCSAGRVCEINEHGDAMCNCIKDCPYETDSRRMVCTNFNETWQSDCEVYRQRC 512
PCL V C CE DA C C + CP D VC ET+ + C + + C
Sbjct: 36 PCLNVTCDYFAECEAFAADDAQCVCPRKCPSYVD---QVCATNGETFDNLCRLKKHVC 90
>SB_51009| Best HMM Match : 7tm_1 (HMM E-Value=2.8e-14)
Length = 579
Score = 39.5 bits (88), Expect = 0.003
Identities = 20/61 (32%), Positives = 28/61 (45%), Gaps = 3/61 (4%)
Frame = +3
Query: 339 PCLKVHCSAGRVCEINEHGD---AMCNCIKDCPYETDSRRMVCTNFNETWQSDCEVYRQR 509
PC C G VC GD C C CP D VC+ FN+ +++ CE+++
Sbjct: 116 PCRDTFCPRGGVCTPYVEGDRSYTTCECPTSCPDLDDP---VCSIFNQEFKNACEMHKYA 172
Query: 510 C 512
C
Sbjct: 173 C 173
>SB_9563| Best HMM Match : Kazal_1 (HMM E-Value=1.7e-07)
Length = 170
Score = 38.7 bits (86), Expect = 0.004
Identities = 20/58 (34%), Positives = 25/58 (43%)
Frame = +3
Query: 339 PCLKVHCSAGRVCEINEHGDAMCNCIKDCPYETDSRRMVCTNFNETWQSDCEVYRQRC 512
PCL V C CE DA C C + CP D VC ET+ + C + + C
Sbjct: 79 PCLNVTCDYFAECEAFAADDAQCVCPRKCPSYVD---QVCATNGETFDNLCLLKKHVC 133
>SB_6686| Best HMM Match : Kazal_1 (HMM E-Value=0)
Length = 2411
Score = 37.5 bits (83), Expect = 0.010
Identities = 18/63 (28%), Positives = 29/63 (46%)
Frame = +3
Query: 339 PCLKVHCSAGRVCEINEHGDAMCNCIKDCPYETDSRRMVCTNFNETWQSDCEVYRQRCLC 518
PC V C C G +C C+ CP + + VC + T++S+CE+ + C
Sbjct: 1407 PCSTVTCLYHSKCFPQADGTGVCICLDQCPPD-NQNASVCGSDLVTYRSECELKAKSCNA 1465
Query: 519 LDN 527
+ N
Sbjct: 1466 MRN 1468
Score = 35.9 bits (79), Expect = 0.032
Identities = 18/58 (31%), Positives = 25/58 (43%)
Frame = +3
Query: 339 PCLKVHCSAGRVCEINEHGDAMCNCIKDCPYETDSRRMVCTNFNETWQSDCEVYRQRC 512
PC C G CEI E G +C C C D VC + +T+ + C + + C
Sbjct: 1798 PCKSATCQFGGRCEIQEDGTEVCICPTYCRLNYDP---VCGSNRKTYLNFCSLTAEAC 1852
Score = 34.3 bits (75), Expect = 0.096
Identities = 18/59 (30%), Positives = 27/59 (45%), Gaps = 1/59 (1%)
Frame = +3
Query: 339 PCLKVHCSAGRVCEI-NEHGDAMCNCIKDCPYETDSRRMVCTNFNETWQSDCEVYRQRC 512
PC C A + C I N + +C + CP S VC + +T+ S+C V + C
Sbjct: 1047 PCALRRCFAEQTCVISNGKAECVCPTVDQCP----SGSTVCASDGKTYASECHVKVRNC 1101
Score = 33.1 bits (72), Expect = 0.22
Identities = 15/57 (26%), Positives = 28/57 (49%)
Frame = +3
Query: 342 CLKVHCSAGRVCEINEHGDAMCNCIKDCPYETDSRRMVCTNFNETWQSDCEVYRQRC 512
C + C +C + G C+C CP S + VC + +++ S+CE+ ++ C
Sbjct: 1659 CGNIRCPRFSMCISAQEGGIKCSCPIYCP---PSGQPVCGSDGKSYGSECELRKEAC 1712
Score = 32.7 bits (71), Expect = 0.29
Identities = 15/58 (25%), Positives = 25/58 (43%)
Frame = +3
Query: 339 PCLKVHCSAGRVCEINEHGDAMCNCIKDCPYETDSRRMVCTNFNETWQSDCEVYRQRC 512
PC + C + C ++ A C C K CP S +C + +T+ + C + C
Sbjct: 1337 PCNRTQCPSYSRCVLDSSLQAKCVCTKSCPL---SYEPLCASNGKTFPNQCALDMAAC 1391
Score = 31.9 bits (69), Expect = 0.51
Identities = 18/59 (30%), Positives = 26/59 (44%)
Frame = +3
Query: 339 PCLKVHCSAGRVCEINEHGDAMCNCIKDCPYETDSRRMVCTNFNETWQSDCEVYRQRCL 515
PC + C G C +G A C C +C T VC + +++ S C + R CL
Sbjct: 1729 PCDDLQCLHGSTCVRRVNGSASCQC-PEC--RTLKYTPVCGDDGKSYLSTCMLKRLACL 1784
Score = 29.5 bits (63), Expect = 2.7
Identities = 15/60 (25%), Positives = 26/60 (43%), Gaps = 2/60 (3%)
Frame = +3
Query: 339 PCLKVHCSAGRVCEINEHGDAMCNC--IKDCPYETDSRRMVCTNFNETWQSDCEVYRQRC 512
PC +V C R C ++ C C +CP D+ VC ++ ++C + + C
Sbjct: 192 PCSRVKCKEDRHCVVDMDMKPKCICPSESECPLTVDT---VCGTDKSSYLNECVMKARAC 248
Score = 29.1 bits (62), Expect = 3.6
Identities = 17/57 (29%), Positives = 24/57 (42%)
Frame = +3
Query: 342 CLKVHCSAGRVCEINEHGDAMCNCIKDCPYETDSRRMVCTNFNETWQSDCEVYRQRC 512
C KV C C + +G A C+C CP + VC ET + C + + C
Sbjct: 1515 CSKVTCHRYAKCNNHYNGTASCSCSSRCPL---VYKPVCGTDMETHINACLLKLKSC 1568
>SB_6080| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2101
Score = 37.5 bits (83), Expect = 0.010
Identities = 18/59 (30%), Positives = 25/59 (42%)
Frame = +3
Query: 339 PCLKVHCSAGRVCEINEHGDAMCNCIKDCPYETDSRRMVCTNFNETWQSDCEVYRQRCL 515
PC V C C++ + G C C C YE VC +T+ + CE+ CL
Sbjct: 1271 PCDNVSCDYYAQCQVEDDGSTSCKCPIFCTYE---YMPVCGTDGKTYGNKCEMRASACL 1326
Score = 34.3 bits (75), Expect = 0.096
Identities = 17/59 (28%), Positives = 27/59 (45%)
Frame = +3
Query: 339 PCLKVHCSAGRVCEINEHGDAMCNCIKDCPYETDSRRMVCTNFNETWQSDCEVYRQRCL 515
PC C G+ C + +G A C C CP D VC + +T+ + C++ C+
Sbjct: 1573 PCEITLCDKGKRCLL-VNGTATCECFSACP---DIYDPVCASNGKTYSNRCDMDADACI 1627
Score = 28.7 bits (61), Expect = 4.8
Identities = 14/59 (23%), Positives = 27/59 (45%), Gaps = 1/59 (1%)
Frame = +3
Query: 339 PCLKVHCSAGRVCEINEHGDAMCNC-IKDCPYETDSRRMVCTNFNETWQSDCEVYRQRC 512
PC + C+ + + G+ MC C + +CP + VC + T+ ++C + C
Sbjct: 1865 PCGNIKCTHKQQQCVVRSGEPMCECVVNECPKNSSK---VCGSDGWTYDNECFLKLYTC 1920
>SB_45722| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1080
Score = 36.7 bits (81), Expect = 0.018
Identities = 20/58 (34%), Positives = 28/58 (48%), Gaps = 1/58 (1%)
Frame = +3
Query: 342 CLKVHCSAGRVCEINEHGDAM-CNCIKDCPYETDSRRMVCTNFNETWQSDCEVYRQRC 512
C + C GR C I E G++ C C C E VC+ F S+CE+++Q C
Sbjct: 600 CHQSICPRGRECIIGEDGNSTSCECSAVCSSE---HAPVCSVFYTDHASECEMHKQAC 654
>SB_13131| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 645
Score = 36.7 bits (81), Expect = 0.018
Identities = 17/58 (29%), Positives = 26/58 (44%)
Frame = +3
Query: 339 PCLKVHCSAGRVCEINEHGDAMCNCIKDCPYETDSRRMVCTNFNETWQSDCEVYRQRC 512
PC + C+ C+ DA C C + CP D R C + T+++DC + C
Sbjct: 151 PCENMQCTHYATCKAYGPKDARCECAESCPTYDDER---CGSDGVTYKNDCLYKKYIC 205
>SB_56344| Best HMM Match : Kazal_2 (HMM E-Value=1.5e-09)
Length = 217
Score = 36.3 bits (80), Expect = 0.024
Identities = 16/59 (27%), Positives = 27/59 (45%)
Frame = +3
Query: 339 PCLKVHCSAGRVCEINEHGDAMCNCIKDCPYETDSRRMVCTNFNETWQSDCEVYRQRCL 515
PC K C G +C + G C C CP ++ VC+ + + + CE++ C+
Sbjct: 13 PCSKRVCMWGEMCRADSSGFTYCECPVSCP---NTYEPVCSVYGIQFPNKCELHMFACI 68
>SB_53017| Best HMM Match : Kazal_1 (HMM E-Value=0)
Length = 1488
Score = 35.9 bits (79), Expect = 0.032
Identities = 18/58 (31%), Positives = 23/58 (39%)
Frame = +3
Query: 339 PCLKVHCSAGRVCEINEHGDAMCNCIKDCPYETDSRRMVCTNFNETWQSDCEVYRQRC 512
PC V C C G A+C C +CP E VC T+ S C + + C
Sbjct: 779 PCKNVECKFKARCVGLPDGSAVCECNTECPSEASP---VCGQDGRTYSSTCAMDARAC 833
Score = 32.7 bits (71), Expect = 0.29
Identities = 17/58 (29%), Positives = 24/58 (41%)
Frame = +3
Query: 339 PCLKVHCSAGRVCEINEHGDAMCNCIKDCPYETDSRRMVCTNFNETWQSDCEVYRQRC 512
PCLK+ C C + G A C C DC + + VC T+ ++C C
Sbjct: 228 PCLKISCKFHSRCVKSSGGSANCVCPSDCSH---TYSPVCGGDKTTYINNCTRIAAAC 282
Score = 32.7 bits (71), Expect = 0.29
Identities = 18/77 (23%), Positives = 28/77 (36%)
Frame = +3
Query: 339 PCLKVHCSAGRVCEINEHGDAMCNCIKDCPYETDSRRMVCTNFNETWQSDCEVYRQRCLC 518
PC ++ CS C + +G A C C + C + VC + + C + R C
Sbjct: 709 PCSRISCSHYGRCVVRNNGKAHCVCPRQCQVRF---KPVCGTDGREYLNRCFLRRNACRT 765
Query: 519 LDNSDQWPWSAIPPRSN 569
+ W P N
Sbjct: 766 QTSIKVHKWGLCNPCKN 782
>SB_28600| Best HMM Match : EGF_CA (HMM E-Value=4.2e-40)
Length = 1042
Score = 34.7 bits (76), Expect = 0.073
Identities = 19/58 (32%), Positives = 23/58 (39%)
Frame = +3
Query: 339 PCLKVHCSAGRVCEINEHGDAMCNCIKDCPYETDSRRMVCTNFNETWQSDCEVYRQRC 512
PCL V C CE DA C C CP D VC +T+ + C + C
Sbjct: 191 PCLNVTCEYFAECEAFAADDAQCVCPSKCPAYID---QVCGTNGQTFDNLCLFKKHVC 245
>SB_15403| Best HMM Match : CH (HMM E-Value=0)
Length = 1907
Score = 34.7 bits (76), Expect = 0.073
Identities = 17/63 (26%), Positives = 29/63 (46%)
Frame = +3
Query: 339 PCLKVHCSAGRVCEINEHGDAMCNCIKDCPYETDSRRMVCTNFNETWQSDCEVYRQRCLC 518
PC KV C+ C G C C + CP S ++VC + + + ++C + + C
Sbjct: 1538 PCSKVKCAFYGQCVWYYDGRTQCECRRTCP---RSDQLVCGSDDRDYANECVLQARACTW 1594
Query: 519 LDN 527
D+
Sbjct: 1595 RDS 1597
Score = 30.7 bits (66), Expect = 1.2
Identities = 17/57 (29%), Positives = 22/57 (38%)
Frame = +3
Query: 342 CLKVHCSAGRVCEINEHGDAMCNCIKDCPYETDSRRMVCTNFNETWQSDCEVYRQRC 512
CL C G VC+ G C C C T VC + T+ + C + RC
Sbjct: 701 CLVQPCKYGGVCQAGADGKTKCVCSAAC---TREYAPVCGSDGNTYNNLCLLTAARC 754
>SB_30470| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 912
Score = 33.9 bits (74), Expect = 0.13
Identities = 17/58 (29%), Positives = 26/58 (44%)
Frame = +3
Query: 339 PCLKVHCSAGRVCEINEHGDAMCNCIKDCPYETDSRRMVCTNFNETWQSDCEVYRQRC 512
PC++V C VC+ DA C C +C + R C N T+ ++C + C
Sbjct: 276 PCIEVTCDFFAVCQAFGPKDARCICPHNCATYENQR---CGEDNVTYTNECTHQKAMC 330
>SB_17430| Best HMM Match : Kazal_1 (HMM E-Value=1e-07)
Length = 396
Score = 31.5 bits (68), Expect = 0.68
Identities = 15/54 (27%), Positives = 24/54 (44%)
Frame = +3
Query: 351 VHCSAGRVCEINEHGDAMCNCIKDCPYETDSRRMVCTNFNETWQSDCEVYRQRC 512
+ C+ C+ DA C C + CP D R C + T+++DC + C
Sbjct: 1 MQCTHYATCKAYGPKDARCECAESCPTYDDER---CGSDGVTYKNDCLYKKYIC 51
>SB_1345| Best HMM Match : IBN_N (HMM E-Value=0.84)
Length = 746
Score = 30.3 bits (65), Expect = 1.6
Identities = 17/64 (26%), Positives = 30/64 (46%), Gaps = 4/64 (6%)
Frame = +3
Query: 378 EINEHGDAMCNCIKDCPY----ETDSRRMVCTNFNETWQSDCEVYRQRCLCLDNSDQWPW 545
++ EH +C+ C + E+D + N+ Q+DC V++QR + L + P
Sbjct: 67 QLMEHSVKYASCVPFCTWMAELESDLMNVFRFNWGSMQQNDCAVFKQRVMSLLVNGTKPM 126
Query: 546 SAIP 557
S P
Sbjct: 127 SEEP 130
>SB_2244| Best HMM Match : zf-CCCH (HMM E-Value=0.004)
Length = 445
Score = 29.9 bits (64), Expect = 2.1
Identities = 27/91 (29%), Positives = 37/91 (40%), Gaps = 8/91 (8%)
Frame = +1
Query: 229 RAWTRSDTMRQK*PELTTFSTRSLM---KRMKTKKSTWKTLA*KSTAAQDVSAKST---- 387
R W R D ++ E + S K +K KK K LA +S + A +
Sbjct: 127 RVWERDDDPKKSPSEKKLKRSNSQEENGKPVKVKKEVNKALAMESAGFMNALATAAVAAP 186
Query: 388 -NTETPCVTASRTVPTRQTPDAWCAQTSTKP 477
+ P TA +T PT TP A T+ KP
Sbjct: 187 RKRKRPATTAQKT-PTATTPTTPTASTAVKP 216
>SB_46203| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 557
Score = 29.5 bits (63), Expect = 2.7
Identities = 15/58 (25%), Positives = 29/58 (50%)
Frame = +3
Query: 339 PCLKVHCSAGRVCEINEHGDAMCNCIKDCPYETDSRRMVCTNFNETWQSDCEVYRQRC 512
PC+ C+A ++ G A+C C+ CP + VC + + + ++CE+ + C
Sbjct: 181 PCMTKACTAPYSKCMSVRGKAVCMCM-SCP---KMNKPVCGSNGKDYNNECELQQFAC 234
Score = 29.5 bits (63), Expect = 2.7
Identities = 16/58 (27%), Positives = 27/58 (46%)
Frame = +3
Query: 339 PCLKVHCSAGRVCEINEHGDAMCNCIKDCPYETDSRRMVCTNFNETWQSDCEVYRQRC 512
PC CSA + G+A+C C+ CP D VC + + + + C++ + C
Sbjct: 250 PCQTSPCSAPYAKCLVVQGEAVCTCL-SCPNMLDP---VCGSDGKNYDNVCKLRQNAC 303
>SB_34889| Best HMM Match : zf-C2H2 (HMM E-Value=0)
Length = 615
Score = 29.5 bits (63), Expect = 2.7
Identities = 13/32 (40%), Positives = 20/32 (62%)
Frame = +2
Query: 494 SIPPAMLMPRQL*SVAVVRNTTTFKSSITERA 589
S+P ML+P+ +V +TTT SS+ E+A
Sbjct: 178 SLPSTMLVPQSYSTVTTTSSTTTVGSSVIEKA 209
>SB_18275| Best HMM Match : Kazal_1 (HMM E-Value=0)
Length = 325
Score = 29.5 bits (63), Expect = 2.7
Identities = 17/58 (29%), Positives = 25/58 (43%)
Frame = +3
Query: 339 PCLKVHCSAGRVCEINEHGDAMCNCIKDCPYETDSRRMVCTNFNETWQSDCEVYRQRC 512
PC CS + +N +G A C C + C T VC +T+ + C + R C
Sbjct: 94 PCDIALCSFPQSICVNVNGTATCECPRAC---TRELMPVCGTDQKTYDNMCLLERAAC 148
Score = 29.5 bits (63), Expect = 2.7
Identities = 18/58 (31%), Positives = 26/58 (44%)
Frame = +3
Query: 339 PCLKVHCSAGRVCEINEHGDAMCNCIKDCPYETDSRRMVCTNFNETWQSDCEVYRQRC 512
PC CS R + +G A C C K C T VC + N+T+ + C + + C
Sbjct: 172 PCEISLCSFPRPICVEVNGTATCECPKVC---TLDYTPVCGSDNKTYANLCNLEVEAC 226
>SB_35516| Best HMM Match : Kazal_1 (HMM E-Value=0)
Length = 320
Score = 29.5 bits (63), Expect = 2.7
Identities = 15/60 (25%), Positives = 28/60 (46%), Gaps = 1/60 (1%)
Frame = +3
Query: 339 PCLKVHCSAGRVCEINE-HGDAMCNCIKDCPYETDSRRMVCTNFNETWQSDCEVYRQRCL 515
PC V+C++ +C C ++C D VC + N T+ ++C + +Q C+
Sbjct: 250 PCKDVNCTSPPYSSCRPLDNKPVCACPENCSSTVDP---VCGSDNNTYDNECLMRQQACV 306
Score = 29.1 bits (62), Expect = 3.6
Identities = 15/60 (25%), Positives = 27/60 (45%), Gaps = 1/60 (1%)
Frame = +3
Query: 339 PCLKVHCSAGRVCEINE-HGDAMCNCIKDCPYETDSRRMVCTNFNETWQSDCEVYRQRCL 515
PC V+C++ +C C ++C D VC N T+ ++C + +Q C+
Sbjct: 136 PCKDVNCTSPPYSSCRPLDNKPVCACPENCSSTVDP---VCGTDNNTYDNECLMRQQACV 192
>SB_22648| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 126
Score = 29.5 bits (63), Expect = 2.7
Identities = 26/84 (30%), Positives = 32/84 (38%)
Frame = +1
Query: 277 TTFSTRSLMKRMKTKKSTWKTLA*KSTAAQDVSAKSTNTETPCVTASRTVPTRQTPDAWC 456
TT ST + T ST + ST ++ +TNT T T S T T T
Sbjct: 2 TTTSTTTSTTNTSTTTSTTTSTTNTSTTTSTTTS-TTNTST---TTSTTTSTTNTSTTTS 57
Query: 457 AQTSTKPGNRIAKYTASDAYASTT 528
TST + T S STT
Sbjct: 58 TTTSTTNTSTTTSTTTSTTNTSTT 81
>SB_29786| Best HMM Match : I-set (HMM E-Value=0)
Length = 6300
Score = 29.1 bits (62), Expect = 3.6
Identities = 14/43 (32%), Positives = 22/43 (51%)
Frame = +3
Query: 378 EINEHGDAMCNCIKDCPYETDSRRMVCTNFNETWQSDCEVYRQ 506
+I EHGD +KDC E ++ ++ C N Q+ C + Q
Sbjct: 2540 DIKEHGDHHTLIVKDCRPE-ETGKLTCKARNSAGQAICSCFVQ 2581
>SB_16945| Best HMM Match : SecA_SW (HMM E-Value=9.3e-39)
Length = 540
Score = 29.1 bits (62), Expect = 3.6
Identities = 13/34 (38%), Positives = 18/34 (52%)
Frame = +1
Query: 496 YTASDAYASTTLISGRGPQYHHVQIEYYGTCREM 597
YT + +T L G HH++IE YGT E+
Sbjct: 26 YTKTGDKGTTALFGGTRVPKHHLRIESYGTVDEL 59
>SB_33509| Best HMM Match : Kazal_1 (HMM E-Value=2.3e-26)
Length = 143
Score = 29.1 bits (62), Expect = 3.6
Identities = 15/60 (25%), Positives = 27/60 (45%), Gaps = 1/60 (1%)
Frame = +3
Query: 339 PCLKVHCSAGRVCEINE-HGDAMCNCIKDCPYETDSRRMVCTNFNETWQSDCEVYRQRCL 515
PC V+C++ +C C ++C D VC N T+ ++C + +Q C+
Sbjct: 2 PCKDVNCTSPPYSSCRPLDNKPVCACPENCSSTVDP---VCGTDNNTYDNECLMRQQACV 58
>SB_42767| Best HMM Match : Thyroglobulin_1 (HMM E-Value=0)
Length = 6725
Score = 28.7 bits (61), Expect = 4.8
Identities = 14/47 (29%), Positives = 23/47 (48%)
Frame = +3
Query: 375 CEINEHGDAMCNCIKDCPYETDSRRMVCTNFNETWQSDCEVYRQRCL 515
C +N A C+C C +E +C + +T+ + CE+ R CL
Sbjct: 5144 CSVNNK--ATCSCPDICTFEYSP---LCGSDGKTYDNQCEMERASCL 5185
>SB_38165| Best HMM Match : Drf_FH1 (HMM E-Value=1)
Length = 231
Score = 28.7 bits (61), Expect = 4.8
Identities = 14/58 (24%), Positives = 29/58 (50%)
Frame = +1
Query: 355 TAAQDVSAKSTNTETPCVTASRTVPTRQTPDAWCAQTSTKPGNRIAKYTASDAYASTT 528
T+ ++ ++ T TP T++ + + + + + TST YT++ +Y STT
Sbjct: 153 TSTTSYTSTTSYTSTPSYTSTTSYTSTTSYTSTTSYTSTTSYTSTTSYTSTTSYTSTT 210
Score = 27.9 bits (59), Expect = 8.4
Identities = 19/82 (23%), Positives = 35/82 (42%)
Frame = +1
Query: 286 STRSLMKRMKTKKSTWKTLA*KSTAAQDVSAKSTNTETPCVTASRTVPTRQTPDAWCAQT 465
ST S +T T T+ ++ ++ T T T++ + + + + + T
Sbjct: 148 STTSYTSTTSYTSTTSYTSTPSYTSTTSYTSTTSYTSTTSYTSTTSYTSTTSYTSTTSYT 207
Query: 466 STKPGNRIAKYTASDAYASTTL 531
ST YTA+ +Y STT+
Sbjct: 208 STTSYTPTPSYTATTSYTSTTI 229
>SB_40330| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 153
Score = 28.3 bits (60), Expect = 6.3
Identities = 14/58 (24%), Positives = 28/58 (48%)
Frame = +1
Query: 355 TAAQDVSAKSTNTETPCVTASRTVPTRQTPDAWCAQTSTKPGNRIAKYTASDAYASTT 528
T+ ++ ++ T TP T++ + + + + + TST YT + +Y STT
Sbjct: 51 TSTTSYTSTTSYTSTPSYTSTTSYTSTTSYTSTTSYTSTTSYTSTTSYTCTTSYTSTT 108
Score = 27.9 bits (59), Expect = 8.4
Identities = 27/108 (25%), Positives = 44/108 (40%)
Frame = +1
Query: 205 NTSSTECLRAWTRSDTMRQK*PELTTFSTRSLMKRMKTKKSTWKTLA*KSTAAQDVSAKS 384
+T+S ++T S T P T+ ++ + + S T + ST + +
Sbjct: 46 STTSYTSTTSYT-STTSYTSTPSYTSTTSYTSTTSYTSTTSYTSTTSYTSTTSYTCTTSY 104
Query: 385 TNTETPCVTASRTVPTRQTPDAWCAQTSTKPGNRIAKYTASDAYASTT 528
T+T + T S T T TP + TST YT + +Y TT
Sbjct: 105 TSTTSYTSTTSYTPTTSYTPTP--SYTSTPSYTSSTSYTPTTSYTCTT 150
>SB_36387| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 266
Score = 27.9 bits (59), Expect = 8.4
Identities = 11/21 (52%), Positives = 14/21 (66%)
Frame = +1
Query: 529 LISGRGPQYHHVQIEYYGTCR 591
++SG G HVQ+ YY TCR
Sbjct: 232 IVSGPGIISGHVQLSYYPTCR 252
>SB_13864| Best HMM Match : FtsX (HMM E-Value=1.6)
Length = 269
Score = 27.9 bits (59), Expect = 8.4
Identities = 22/66 (33%), Positives = 28/66 (42%), Gaps = 2/66 (3%)
Frame = +1
Query: 316 TKKSTWKTLA*KSTAAQDVSAKSTNTETPCV--TASRTVPTRQTPDAWCAQTSTKPGNRI 489
T +T A +TAA +A T T T V TA+ TV T A T+T
Sbjct: 136 TATATTTATAATATAAATATATGTTTATATVTATATATVTAAATATATATATATATTTST 195
Query: 490 AKYTAS 507
A TA+
Sbjct: 196 ATVTAT 201
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,634,565
Number of Sequences: 59808
Number of extensions: 430228
Number of successful extensions: 1586
Number of sequences better than 10.0: 32
Number of HSP's better than 10.0 without gapping: 1302
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1544
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 1829596184
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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