BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= brP-0615 (700 letters) Database: celegans 27,780 sequences; 12,740,198 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value L21758-1|AAA16827.1| 264|Caenorhabditis elegans osteonectin pro... 63 2e-10 AF036692-3|AAB88325.1| 264|Caenorhabditis elegans Osteonectin (... 63 2e-10 U39999-14|ABF71722.1| 1483|Caenorhabditis elegans Hypothetical p... 42 6e-04 AM773423-1|CAO78927.1| 1473|Caenorhabditis elegans AGRin (synapt... 42 6e-04 Z48582-8|CAB70201.1| 3178|Caenorhabditis elegans Hypothetical pr... 35 0.049 Z48544-10|CAB70192.1| 3178|Caenorhabditis elegans Hypothetical p... 35 0.049 U64833-11|AAB04822.2| 615|Caenorhabditis elegans Hypothetical p... 31 0.60 AC024785-3|AAF60597.2| 456|Caenorhabditis elegans Hypothetical ... 31 0.60 U64835-5|AAG24196.1| 592|Caenorhabditis elegans Hypothetical pr... 31 1.0 U58751-5|AAN84882.1| 781|Caenorhabditis elegans Wasp (actin cyt... 29 4.2 Z93395-2|CAB07705.1| 905|Caenorhabditis elegans Hypothetical pr... 28 5.6 Z83112-5|CAB05541.1| 905|Caenorhabditis elegans Hypothetical pr... 28 5.6 AC024751-7|AAK21507.2| 1258|Caenorhabditis elegans Hypothetical ... 28 5.6 AL132860-13|CAB60509.1| 292|Caenorhabditis elegans Hypothetical... 28 7.4 Z68298-1|CAA92598.2| 342|Caenorhabditis elegans Hypothetical pr... 27 9.8 >L21758-1|AAA16827.1| 264|Caenorhabditis elegans osteonectin protein. Length = 264 Score = 62.9 bits (146), Expect = 2e-10 Identities = 26/67 (38%), Positives = 37/67 (55%), Gaps = 1/67 (1%) Frame = +3 Query: 339 PCLKVHCSAGRVCEINEHGDAMCNCIKDCP-YETDSRRMVCTNFNETWQSDCEVYRQRCL 515 PC C G+ C + + G+ C CI CP + D VC N N+T+ S C++YR+RCL Sbjct: 52 PCEDHQCGWGKECVVGKKGEPTCECISKCPELDGDPMDKVCANNNQTFTSLCDLYRERCL 111 Query: 516 CLDNSDQ 536 C S + Sbjct: 112 CKRKSKE 118 Score = 58.0 bits (134), Expect = 6e-09 Identities = 20/44 (45%), Positives = 32/44 (72%) Frame = +1 Query: 562 VQIEYYGTCREMPDCTESEMSDFPRRMRDWLFNIMRDMAERXKL 693 V +EY G C+++ +CTE M+ FP RM DWLF +M+++ +R +L Sbjct: 127 VHLEYLGECKKLDECTEEHMAQFPERMADWLFQVMKELKKRREL 170 >AF036692-3|AAB88325.1| 264|Caenorhabditis elegans Osteonectin (sparc) related protein1 protein. Length = 264 Score = 62.9 bits (146), Expect = 2e-10 Identities = 26/67 (38%), Positives = 37/67 (55%), Gaps = 1/67 (1%) Frame = +3 Query: 339 PCLKVHCSAGRVCEINEHGDAMCNCIKDCP-YETDSRRMVCTNFNETWQSDCEVYRQRCL 515 PC C G+ C + + G+ C CI CP + D VC N N+T+ S C++YR+RCL Sbjct: 52 PCEDHQCGWGKECVVGKKGEPTCECISKCPELDGDPMDKVCANNNQTFTSLCDLYRERCL 111 Query: 516 CLDNSDQ 536 C S + Sbjct: 112 CKRKSKE 118 Score = 58.0 bits (134), Expect = 6e-09 Identities = 20/44 (45%), Positives = 32/44 (72%) Frame = +1 Query: 562 VQIEYYGTCREMPDCTESEMSDFPRRMRDWLFNIMRDMAERXKL 693 V +EY G C+++ +CTE M+ FP RM DWLF +M+++ +R +L Sbjct: 127 VHLEYLGECKKLDECTEEHMAQFPERMADWLFQVMKELKKRREL 170 >U39999-14|ABF71722.1| 1483|Caenorhabditis elegans Hypothetical protein F41G3.12 protein. Length = 1483 Score = 41.5 bits (93), Expect = 6e-04 Identities = 18/56 (32%), Positives = 26/56 (46%), Gaps = 1/56 (1%) Frame = +3 Query: 348 KVHCSAGRVCEINEHGDAMCNCIKDCP-YETDSRRMVCTNFNETWQSDCEVYRQRC 512 K C C + E+ A C C DCP YE + + VC T+ S+C + + C Sbjct: 515 KEKCDFYSACVVGENEKAECKCPDDCPSYEMEEGKEVCGTDGVTYSSECHMKKSAC 570 Score = 39.1 bits (87), Expect = 0.003 Identities = 18/58 (31%), Positives = 26/58 (44%) Frame = +3 Query: 339 PCLKVHCSAGRVCEINEHGDAMCNCIKDCPYETDSRRMVCTNFNETWQSDCEVYRQRC 512 PC K+ C C + A C C C D R VC ET+ ++CE+ ++ C Sbjct: 369 PCEKMECGFWGSCVVKPDRTAECECPNRCE---DVMRPVCATNGETFDNECEMKKKSC 423 Score = 29.9 bits (64), Expect = 1.8 Identities = 16/69 (23%), Positives = 28/69 (40%) Frame = +3 Query: 339 PCLKVHCSAGRVCEINEHGDAMCNCIKDCPYETDSRRMVCTNFNETWQSDCEVYRQRCLC 518 PC C G+ C++ C C + C T + VC +T+ ++C + + C Sbjct: 295 PCHGHKCPNGQTCQLGVDRRPECKCSEQC---TMNSAHVCGTDGKTYLNEC--FLKLAAC 349 Query: 519 LDNSDQWPW 545 + D W Sbjct: 350 KEQKDILVW 358 Score = 29.5 bits (63), Expect = 2.4 Identities = 15/57 (26%), Positives = 26/57 (45%) Frame = +3 Query: 357 CSAGRVCEINEHGDAMCNCIKDCPYETDSRRMVCTNFNETWQSDCEVYRQRCLCLDN 527 C +VC + D C+ CP TD + VC + +T+ ++C + C+ N Sbjct: 448 CKKPQVCVVV---DGKPKCV--CPSCTDEFKEVCGSDGKTYSNECRLQNAACMAQKN 499 >AM773423-1|CAO78927.1| 1473|Caenorhabditis elegans AGRin (synaptic protein) homologfamily member protein. Length = 1473 Score = 41.5 bits (93), Expect = 6e-04 Identities = 18/56 (32%), Positives = 26/56 (46%), Gaps = 1/56 (1%) Frame = +3 Query: 348 KVHCSAGRVCEINEHGDAMCNCIKDCP-YETDSRRMVCTNFNETWQSDCEVYRQRC 512 K C C + E+ A C C DCP YE + + VC T+ S+C + + C Sbjct: 523 KEKCDFYSACVVGENEKAECKCPDDCPSYEMEEGKEVCGTDGVTYSSECHMKKSAC 578 Score = 39.1 bits (87), Expect = 0.003 Identities = 18/58 (31%), Positives = 26/58 (44%) Frame = +3 Query: 339 PCLKVHCSAGRVCEINEHGDAMCNCIKDCPYETDSRRMVCTNFNETWQSDCEVYRQRC 512 PC K+ C C + A C C C D R VC ET+ ++CE+ ++ C Sbjct: 377 PCEKMECGFWGSCVVKPDRTAECECPNRCE---DVMRPVCATNGETFDNECEMKKKSC 431 Score = 29.9 bits (64), Expect = 1.8 Identities = 16/69 (23%), Positives = 28/69 (40%) Frame = +3 Query: 339 PCLKVHCSAGRVCEINEHGDAMCNCIKDCPYETDSRRMVCTNFNETWQSDCEVYRQRCLC 518 PC C G+ C++ C C + C T + VC +T+ ++C + + C Sbjct: 303 PCHGHKCPNGQTCQLGVDRRPECKCSEQC---TMNSAHVCGTDGKTYLNEC--FLKLAAC 357 Query: 519 LDNSDQWPW 545 + D W Sbjct: 358 KEQKDILVW 366 Score = 29.5 bits (63), Expect = 2.4 Identities = 15/57 (26%), Positives = 26/57 (45%) Frame = +3 Query: 357 CSAGRVCEINEHGDAMCNCIKDCPYETDSRRMVCTNFNETWQSDCEVYRQRCLCLDN 527 C +VC + D C+ CP TD + VC + +T+ ++C + C+ N Sbjct: 456 CKKPQVCVVV---DGKPKCV--CPSCTDEFKEVCGSDGKTYSNECRLQNAACMAQKN 507 >Z48582-8|CAB70201.1| 3178|Caenorhabditis elegans Hypothetical protein ZK945.9 protein. Length = 3178 Score = 35.1 bits (77), Expect = 0.049 Identities = 27/94 (28%), Positives = 47/94 (50%), Gaps = 7/94 (7%) Frame = +1 Query: 277 TTFSTRSLMKRMKTKKSTWKTLA*KSTAAQDVSAKSTNTETPC---VTASRTVPTRQTPD 447 T+ ST S +++ +T+ + A ST++ + +S++T T T S ++PT TP+ Sbjct: 309 TSTSTPSTSTTIESTSTTFTSTASTSTSSTSTTQQSSSTITSSPSSTTLSTSIPTTTTPE 368 Query: 448 AWCAQTSTKPGNRIAKY----TASDAYASTTLIS 537 + S+ P N I Y T S + +T L S Sbjct: 369 I-TSTLSSLPDNAICSYLDETTTSTTFTTTMLTS 401 >Z48544-10|CAB70192.1| 3178|Caenorhabditis elegans Hypothetical protein ZK945.9 protein. Length = 3178 Score = 35.1 bits (77), Expect = 0.049 Identities = 27/94 (28%), Positives = 47/94 (50%), Gaps = 7/94 (7%) Frame = +1 Query: 277 TTFSTRSLMKRMKTKKSTWKTLA*KSTAAQDVSAKSTNTETPC---VTASRTVPTRQTPD 447 T+ ST S +++ +T+ + A ST++ + +S++T T T S ++PT TP+ Sbjct: 309 TSTSTPSTSTTIESTSTTFTSTASTSTSSTSTTQQSSSTITSSPSSTTLSTSIPTTTTPE 368 Query: 448 AWCAQTSTKPGNRIAKY----TASDAYASTTLIS 537 + S+ P N I Y T S + +T L S Sbjct: 369 I-TSTLSSLPDNAICSYLDETTTSTTFTTTMLTS 401 >U64833-11|AAB04822.2| 615|Caenorhabditis elegans Hypothetical protein B0507.1 protein. Length = 615 Score = 31.5 bits (68), Expect = 0.60 Identities = 13/46 (28%), Positives = 16/46 (34%) Frame = +3 Query: 357 CSAGRVCEINEHGDAMCNCIKDCPYETDSRRMVCTNFNETWQSDCE 494 CS G C G+ MC C D Y S C + C+ Sbjct: 215 CSGGAACICGARGNCMCECATDFGYTLASDGKTCQRVRRRLKEKCK 260 >AC024785-3|AAF60597.2| 456|Caenorhabditis elegans Hypothetical protein Y46C8AL.2 protein. Length = 456 Score = 31.5 bits (68), Expect = 0.60 Identities = 22/67 (32%), Positives = 29/67 (43%) Frame = +1 Query: 277 TTFSTRSLMKRMKTKKSTWKTLA*KSTAAQDVSAKSTNTETPCVTASRTVPTRQTPDAWC 456 TT +T + MK T +T T+ KST + KST T T ++ PT T Sbjct: 261 TTPTTPTTMKSTPTTPTTPTTM--KSTPTTPTTMKSTPTTPTTPTTMKSTPTTPTTPTTM 318 Query: 457 AQTSTKP 477 T T P Sbjct: 319 KSTPTTP 325 Score = 28.7 bits (61), Expect = 4.2 Identities = 19/65 (29%), Positives = 28/65 (43%) Frame = +1 Query: 283 FSTRSLMKRMKTKKSTWKTLA*KSTAAQDVSAKSTNTETPCVTASRTVPTRQTPDAWCAQ 462 ++T+ MK+ +T T+ KST + KST T T ++ PT T Sbjct: 149 WATKPTPSTMKSTPTTPTTI--KSTPTTPTTMKSTPTTPTTPTTMKSTPTTPTTPTTMKS 206 Query: 463 TSTKP 477 T T P Sbjct: 207 TPTTP 211 Score = 28.7 bits (61), Expect = 4.2 Identities = 20/67 (29%), Positives = 28/67 (41%) Frame = +1 Query: 277 TTFSTRSLMKRMKTKKSTWKTLA*KSTAAQDVSAKSTNTETPCVTASRTVPTRQTPDAWC 456 TT +T + MK T +T K+ +T + KST T T ++ PT T Sbjct: 274 TTPTTPTTMKSTPTTPTTMKSTP--TTPTTPTTMKSTPTTPTTPTTMKSTPTTPTTPTTM 331 Query: 457 AQTSTKP 477 T T P Sbjct: 332 KSTPTTP 338 Score = 27.9 bits (59), Expect = 7.4 Identities = 19/55 (34%), Positives = 26/55 (47%) Frame = +1 Query: 277 TTFSTRSLMKRMKTKKSTWKTLA*KSTAAQDVSAKSTNTETPCVTASRTVPTRQT 441 TT +T + MK T +T T+ KST + KST T T ++ PT T Sbjct: 375 TTPTTPTTMKSTPTTPTTPTTM--KSTPTTPTTMKSTPTTPTTPTTMKSTPTTPT 427 Score = 27.5 bits (58), Expect = 9.8 Identities = 20/68 (29%), Positives = 29/68 (42%), Gaps = 1/68 (1%) Frame = +1 Query: 277 TTFSTRSLMKRMKTKKSTWKTL-A*KSTAAQDVSAKSTNTETPCVTASRTVPTRQTPDAW 453 TT +T + MK T +T T+ + +T + KST T T ++ PT T Sbjct: 183 TTPTTPTTMKSTPTTPTTPTTMKSTPTTPTTPTTMKSTPTTPTTPTTMKSTPTTPTTPTT 242 Query: 454 CAQTSTKP 477 T T P Sbjct: 243 MKSTPTTP 250 Score = 27.5 bits (58), Expect = 9.8 Identities = 20/68 (29%), Positives = 29/68 (42%), Gaps = 1/68 (1%) Frame = +1 Query: 277 TTFSTRSLMKRMKTKKSTWKTL-A*KSTAAQDVSAKSTNTETPCVTASRTVPTRQTPDAW 453 TT +T + MK T +T T+ + +T + KST T T ++ PT T Sbjct: 196 TTPTTPTTMKSTPTTPTTPTTMKSTPTTPTTPTTMKSTPTTPTTPTTMKSTPTTPTTPTT 255 Query: 454 CAQTSTKP 477 T T P Sbjct: 256 MKSTPTTP 263 Score = 27.5 bits (58), Expect = 9.8 Identities = 20/68 (29%), Positives = 29/68 (42%), Gaps = 1/68 (1%) Frame = +1 Query: 277 TTFSTRSLMKRMKTKKSTWKTL-A*KSTAAQDVSAKSTNTETPCVTASRTVPTRQTPDAW 453 TT +T + MK T +T T+ + +T + KST T T ++ PT T Sbjct: 209 TTPTTPTTMKSTPTTPTTPTTMKSTPTTPTTPTTMKSTPTTPTTPTTMKSTPTTPTTPTT 268 Query: 454 CAQTSTKP 477 T T P Sbjct: 269 MKSTPTTP 276 Score = 27.5 bits (58), Expect = 9.8 Identities = 20/68 (29%), Positives = 29/68 (42%), Gaps = 1/68 (1%) Frame = +1 Query: 277 TTFSTRSLMKRMKTKKSTWKTL-A*KSTAAQDVSAKSTNTETPCVTASRTVPTRQTPDAW 453 TT +T + MK T +T T+ + +T + KST T T ++ PT T Sbjct: 222 TTPTTPTTMKSTPTTPTTPTTMKSTPTTPTTPTTMKSTPTTPTTPTTMKSTPTTPTTPTT 281 Query: 454 CAQTSTKP 477 T T P Sbjct: 282 MKSTPTTP 289 Score = 27.5 bits (58), Expect = 9.8 Identities = 20/68 (29%), Positives = 29/68 (42%), Gaps = 1/68 (1%) Frame = +1 Query: 277 TTFSTRSLMKRMKTKKSTWKTL-A*KSTAAQDVSAKSTNTETPCVTASRTVPTRQTPDAW 453 TT +T + MK T +T T+ + +T + KST T T ++ PT T Sbjct: 297 TTPTTPTTMKSTPTTPTTPTTMKSTPTTPTTPTTMKSTPTTPTTPTTMKSTPTTPTTPTT 356 Query: 454 CAQTSTKP 477 T T P Sbjct: 357 MKSTPTTP 364 Score = 27.5 bits (58), Expect = 9.8 Identities = 20/68 (29%), Positives = 29/68 (42%), Gaps = 1/68 (1%) Frame = +1 Query: 277 TTFSTRSLMKRMKTKKSTWKTL-A*KSTAAQDVSAKSTNTETPCVTASRTVPTRQTPDAW 453 TT +T + MK T +T T+ + +T + KST T T ++ PT T Sbjct: 310 TTPTTPTTMKSTPTTPTTPTTMKSTPTTPTTPTTMKSTPTTPTTPTTMKSTPTTPTTPTT 369 Query: 454 CAQTSTKP 477 T T P Sbjct: 370 MKSTPTTP 377 Score = 27.5 bits (58), Expect = 9.8 Identities = 20/68 (29%), Positives = 29/68 (42%), Gaps = 1/68 (1%) Frame = +1 Query: 277 TTFSTRSLMKRMKTKKSTWKTL-A*KSTAAQDVSAKSTNTETPCVTASRTVPTRQTPDAW 453 TT +T + MK T +T T+ + +T + KST T T ++ PT T Sbjct: 323 TTPTTPTTMKSTPTTPTTPTTMKSTPTTPTTPTTMKSTPTTPTTPTTMKSTPTTPTTPTT 382 Query: 454 CAQTSTKP 477 T T P Sbjct: 383 MKSTPTTP 390 Score = 27.5 bits (58), Expect = 9.8 Identities = 20/68 (29%), Positives = 29/68 (42%), Gaps = 1/68 (1%) Frame = +1 Query: 277 TTFSTRSLMKRMKTKKSTWKTL-A*KSTAAQDVSAKSTNTETPCVTASRTVPTRQTPDAW 453 TT +T + MK T +T T+ + +T + KST T T ++ PT T Sbjct: 336 TTPTTPTTMKSTPTTPTTPTTMKSTPTTPTTPTTMKSTPTTPTTPTTMKSTPTTPTTPTT 395 Query: 454 CAQTSTKP 477 T T P Sbjct: 396 MKSTPTTP 403 >U64835-5|AAG24196.1| 592|Caenorhabditis elegans Hypothetical protein T09D3.3 protein. Length = 592 Score = 30.7 bits (66), Expect = 1.0 Identities = 29/104 (27%), Positives = 46/104 (44%), Gaps = 3/104 (2%) Frame = +1 Query: 205 NTSSTECLRA--WTRSDTMRQK*PELTTFSTRSLMKRMKTKKSTWKTLA*KSTAAQDVSA 378 N +S +R WT+ K P+ T F+T + T +T T +T++ S Sbjct: 410 NVTSPPVIRPSYWTKHRVKSTKEPKTTIFTTTPVPCPTTTSTTTSATTLVPTTSS---ST 466 Query: 379 KSTNTETPC-VTASRTVPTRQTPDAWCAQTSTKPGNRIAKYTAS 507 +T T TP VT++ T PT T + TST + T++ Sbjct: 467 TTTTTTTPVPVTSTTTEPTTTT---YTTSTSTSTTTTLPPTTST 507 Score = 27.5 bits (58), Expect = 9.8 Identities = 22/85 (25%), Positives = 36/85 (42%) Frame = +1 Query: 280 TFSTRSLMKRMKTKKSTWKTLA*KSTAAQDVSAKSTNTETPCVTASRTVPTRQTPDAWCA 459 ++ T+ +K K K+T T + S T P ++S T T TP Sbjct: 420 SYWTKHRVKSTKEPKTTIFTTTPVPCPTTTSTTTSATTLVPTTSSSTTTTTTTTPVP-VT 478 Query: 460 QTSTKPGNRIAKYTASDAYASTTLI 534 T+T+P YT S + ++TT + Sbjct: 479 STTTEPTT--TTYTTSTSTSTTTTL 501 >U58751-5|AAN84882.1| 781|Caenorhabditis elegans Wasp (actin cytoskeleton modulator)homolog protein 1, isoform b protein. Length = 781 Score = 28.7 bits (61), Expect = 4.2 Identities = 16/56 (28%), Positives = 24/56 (42%), Gaps = 2/56 (3%) Frame = +1 Query: 442 PDAWCAQTSTKPGNRIAKYTASDAYASTTLISGRGPQYHHVQIEYY--GTCREMPD 603 P A +S KP + ++ S+T SG G HH ++ + G C PD Sbjct: 35 PSATTNPSSNKPSTVSSAAQIYSSFPSSTSSSGTGGHLHHNHMQRFARGGCSSFPD 90 >Z93395-2|CAB07705.1| 905|Caenorhabditis elegans Hypothetical protein ZC101.1 protein. Length = 905 Score = 28.3 bits (60), Expect = 5.6 Identities = 16/54 (29%), Positives = 26/54 (48%), Gaps = 2/54 (3%) Frame = +3 Query: 357 CSAGRVCEINEHGDAMCNCIKDCPYETDSRRMVCTNFNET--WQSDCEVYRQRC 512 C G E + HG + C K CP T+ +C + ++T QS+C + +C Sbjct: 385 CQDGSEPEFSLHGSSYCWSNKVCPAMTECVAGLCCSISKTRKRQSECLEGQFKC 438 >Z83112-5|CAB05541.1| 905|Caenorhabditis elegans Hypothetical protein ZC101.1 protein. Length = 905 Score = 28.3 bits (60), Expect = 5.6 Identities = 16/54 (29%), Positives = 26/54 (48%), Gaps = 2/54 (3%) Frame = +3 Query: 357 CSAGRVCEINEHGDAMCNCIKDCPYETDSRRMVCTNFNET--WQSDCEVYRQRC 512 C G E + HG + C K CP T+ +C + ++T QS+C + +C Sbjct: 385 CQDGSEPEFSLHGSSYCWSNKVCPAMTECVAGLCCSISKTRKRQSECLEGQFKC 438 >AC024751-7|AAK21507.2| 1258|Caenorhabditis elegans Hypothetical protein Y18H1A.3 protein. Length = 1258 Score = 28.3 bits (60), Expect = 5.6 Identities = 15/55 (27%), Positives = 24/55 (43%) Frame = +1 Query: 349 KSTAAQDVSAKSTNTETPCVTASRTVPTRQTPDAWCAQTSTKPGNRIAKYTASDA 513 + +A VS K + ++PC SRTV R D + KP + + +A Sbjct: 876 RQSAIISVSRKDFHAKSPCEITSRTVVGRHIWDLDTHEDVRKPATNVTNWLRKEA 930 >AL132860-13|CAB60509.1| 292|Caenorhabditis elegans Hypothetical protein Y56A3A.15 protein. Length = 292 Score = 27.9 bits (59), Expect = 7.4 Identities = 13/47 (27%), Positives = 24/47 (51%) Frame = -2 Query: 627 VRHLAFSAVRHFSARSVILDLNVVVLRTTATDQSCRGISIAGGILRN 487 + H+A+ RH S + VIL+ N+ + D G+ IA +++ Sbjct: 110 IEHVAYVLCRHNSIKLVILEPNIDEVYEIVKDMKTFGVKIASSEIQS 156 >Z68298-1|CAA92598.2| 342|Caenorhabditis elegans Hypothetical protein F44D12.2 protein. Length = 342 Score = 27.5 bits (58), Expect = 9.8 Identities = 13/35 (37%), Positives = 17/35 (48%), Gaps = 4/35 (11%) Frame = +3 Query: 339 PCLKVHCSAGRV----CEINEHGDAMCNCIKDCPY 431 P ++ C G V C +N HG+ MC C D Y Sbjct: 59 PTIQKGCVIGEVAPEGCRVNHHGNVMCFC-SDADY 92 Database: celegans Posted date: Oct 23, 2007 1:18 PM Number of letters in database: 12,740,198 Number of sequences in database: 27,780 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 15,368,408 Number of Sequences: 27780 Number of extensions: 302406 Number of successful extensions: 1095 Number of sequences better than 10.0: 15 Number of HSP's better than 10.0 without gapping: 981 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1090 length of database: 12,740,198 effective HSP length: 79 effective length of database: 10,545,578 effective search space used: 1613473434 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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