Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brP-0614
         (795 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC143044-1|AAI43045.1|  658|Homo sapiens C6orf174 protein protein.     30   8.4  
BC143043-1|AAI43044.1|  658|Homo sapiens C6orf174 protein protein.     30   8.4  
BC127760-1|AAI27761.1|  658|Homo sapiens C6orf174 protein protein.     30   8.4  

>BC143044-1|AAI43045.1|  658|Homo sapiens C6orf174 protein protein.
          Length = 658

 Score = 30.3 bits (65), Expect = 8.4
 Identities = 20/66 (30%), Positives = 32/66 (48%), Gaps = 2/66 (3%)
 Frame = +3

Query: 111 PSWDGEGSSDERDSGISLGAEYRPQPERHPEE--EDAHLKAELARLATEVATLKNMMHQN 284
           P    EGS+    SG  + A   P  + HP++  E   ++ E+ +L  E  TLKN + + 
Sbjct: 29  PQQSAEGSA----SGGGMQAAAPPSSQPHPQQLQEQEEMQEEMEKLREENETLKNEIDEL 84

Query: 285 KTRAHE 302
           +T   E
Sbjct: 85  RTEMDE 90


>BC143043-1|AAI43044.1|  658|Homo sapiens C6orf174 protein protein.
          Length = 658

 Score = 30.3 bits (65), Expect = 8.4
 Identities = 20/66 (30%), Positives = 32/66 (48%), Gaps = 2/66 (3%)
 Frame = +3

Query: 111 PSWDGEGSSDERDSGISLGAEYRPQPERHPEE--EDAHLKAELARLATEVATLKNMMHQN 284
           P    EGS+    SG  + A   P  + HP++  E   ++ E+ +L  E  TLKN + + 
Sbjct: 29  PQQSAEGSA----SGGGMQAAAPPSSQPHPQQLQEQEEMQEEMEKLREENETLKNEIDEL 84

Query: 285 KTRAHE 302
           +T   E
Sbjct: 85  RTEMDE 90


>BC127760-1|AAI27761.1|  658|Homo sapiens C6orf174 protein protein.
          Length = 658

 Score = 30.3 bits (65), Expect = 8.4
 Identities = 20/66 (30%), Positives = 32/66 (48%), Gaps = 2/66 (3%)
 Frame = +3

Query: 111 PSWDGEGSSDERDSGISLGAEYRPQPERHPEE--EDAHLKAELARLATEVATLKNMMHQN 284
           P    EGS+    SG  + A   P  + HP++  E   ++ E+ +L  E  TLKN + + 
Sbjct: 29  PQQSAEGSA----SGGGMQAAAPPSSQPHPQQLQEQEEMQEEMEKLREENETLKNEIDEL 84

Query: 285 KTRAHE 302
           +T   E
Sbjct: 85  RTEMDE 90


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 82,037,142
Number of Sequences: 237096
Number of extensions: 1353487
Number of successful extensions: 3782
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3618
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3776
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 9757565650
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)