Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brP-0613
         (700 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292354-1|CAL23166.1|  321|Tribolium castaneum gustatory recept...    26   0.26 
DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7 prot...    22   5.5  
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    22   5.5  
AY884064-1|AAX84205.1|  683|Tribolium castaneum pro-phenol oxida...    21   9.7  
AM292361-1|CAL23173.2|  373|Tribolium castaneum gustatory recept...    21   9.7  
AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr...    21   9.7  

>AM292354-1|CAL23166.1|  321|Tribolium castaneum gustatory receptor
           candidate 33 protein.
          Length = 321

 Score = 26.2 bits (55), Expect = 0.26
 Identities = 14/52 (26%), Positives = 25/52 (48%)
 Frame = +2

Query: 74  ISICIS*YYMYTSYNLLFFKFCISKVVYYCSRQL*IQFTKLCIRGTVLRIIL 229
           +++C + YY    Y   + ++ +S +  YC      QF   C   T+L +IL
Sbjct: 113 LTLCYAVYYWRQQYEDFWHRYTLSFIENYC------QFLYNCFHSTLLLMIL 158


>DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7
           protein.
          Length = 980

 Score = 21.8 bits (44), Expect = 5.5
 Identities = 9/18 (50%), Positives = 12/18 (66%)
 Frame = +1

Query: 559 SGRRAALPRPSTDSTYRK 612
           +G  A L  PS+DS Y+K
Sbjct: 289 TGHNAPLYSPSSDSQYQK 306


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 21.8 bits (44), Expect = 5.5
 Identities = 9/27 (33%), Positives = 16/27 (59%)
 Frame = +3

Query: 81  YVYHNIICILPIIYFFLNFVFPKLFTI 161
           Y Y+  I +L + YF+  F+   +FT+
Sbjct: 102 YFYYAFIILLCVYYFYYAFI---IFTV 125


>AY884064-1|AAX84205.1|  683|Tribolium castaneum pro-phenol oxidase
           subunit 2 protein.
          Length = 683

 Score = 21.0 bits (42), Expect = 9.7
 Identities = 8/20 (40%), Positives = 11/20 (55%)
 Frame = +1

Query: 337 LKRKTLYKSLNQTIIKVYVP 396
           LKR T +   N+ I + Y P
Sbjct: 252 LKRATRFNDFNEAIKEAYFP 271


>AM292361-1|CAL23173.2|  373|Tribolium castaneum gustatory receptor
           candidate 40 protein.
          Length = 373

 Score = 21.0 bits (42), Expect = 9.7
 Identities = 7/16 (43%), Positives = 12/16 (75%)
 Frame = +1

Query: 643 YYSKKIFMEKMLSSNT 690
           +YSKK+F  K++ S +
Sbjct: 226 WYSKKVFYSKIIISGS 241


>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like protein
            protein.
          Length = 1156

 Score = 21.0 bits (42), Expect = 9.7
 Identities = 8/14 (57%), Positives = 12/14 (85%)
 Frame = -2

Query: 585  AREGSPASAAGVPL 544
            A++GS +S+ GVPL
Sbjct: 1093 AQQGSSSSSEGVPL 1106


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 145,609
Number of Sequences: 336
Number of extensions: 3451
Number of successful extensions: 9
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18426585
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)