BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= brP-0613 (700 letters) Database: fruitfly 53,049 sequences; 24,988,368 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value AL121806-13|CAB65886.1| 602|Drosophila melanogaster EG:33C11.3 ... 29 8.0 AE014298-168|AAF45597.2| 655|Drosophila melanogaster CG3638-PA,... 29 8.0 AE014298-167|AAN09038.1| 639|Drosophila melanogaster CG3638-PB,... 29 8.0 AE014298-166|AAN09037.1| 1201|Drosophila melanogaster CG3638-PC,... 29 8.0 AE014298-165|AAN09036.1| 1404|Drosophila melanogaster CG3638-PD,... 29 8.0 >AL121806-13|CAB65886.1| 602|Drosophila melanogaster EG:33C11.3 protein. Length = 602 Score = 28.7 bits (61), Expect = 8.0 Identities = 13/34 (38%), Positives = 18/34 (52%) Frame = +1 Query: 547 RNPRSGRRAALPRPSTDSTYRKTTALYTNRNRYY 648 RN +G R L PS+ S++ +TA Y N Y Sbjct: 502 RNGSAGLRQGLASPSSQSSHTSSTATYNNGTTSY 535 >AE014298-168|AAF45597.2| 655|Drosophila melanogaster CG3638-PA, isoform A protein. Length = 655 Score = 28.7 bits (61), Expect = 8.0 Identities = 13/34 (38%), Positives = 18/34 (52%) Frame = +1 Query: 547 RNPRSGRRAALPRPSTDSTYRKTTALYTNRNRYY 648 RN +G R L PS+ S++ +TA Y N Y Sbjct: 514 RNGSAGLRQGLASPSSQSSHTSSTATYNNGTTSY 547 >AE014298-167|AAN09038.1| 639|Drosophila melanogaster CG3638-PB, isoform B protein. Length = 639 Score = 28.7 bits (61), Expect = 8.0 Identities = 13/34 (38%), Positives = 18/34 (52%) Frame = +1 Query: 547 RNPRSGRRAALPRPSTDSTYRKTTALYTNRNRYY 648 RN +G R L PS+ S++ +TA Y N Y Sbjct: 498 RNGSAGLRQGLASPSSQSSHTSSTATYNNGTTSY 531 >AE014298-166|AAN09037.1| 1201|Drosophila melanogaster CG3638-PC, isoform C protein. Length = 1201 Score = 28.7 bits (61), Expect = 8.0 Identities = 13/34 (38%), Positives = 18/34 (52%) Frame = +1 Query: 547 RNPRSGRRAALPRPSTDSTYRKTTALYTNRNRYY 648 RN +G R L PS+ S++ +TA Y N Y Sbjct: 514 RNGSAGLRQGLASPSSQSSHTSSTATYNNGTTSY 547 >AE014298-165|AAN09036.1| 1404|Drosophila melanogaster CG3638-PD, isoform D protein. Length = 1404 Score = 28.7 bits (61), Expect = 8.0 Identities = 13/34 (38%), Positives = 18/34 (52%) Frame = +1 Query: 547 RNPRSGRRAALPRPSTDSTYRKTTALYTNRNRYY 648 RN +G R L PS+ S++ +TA Y N Y Sbjct: 514 RNGSAGLRQGLASPSSQSSHTSSTATYNNGTTSY 547 Database: fruitfly Posted date: Oct 23, 2007 1:17 PM Number of letters in database: 24,988,368 Number of sequences in database: 53,049 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 24,906,451 Number of Sequences: 53049 Number of extensions: 503255 Number of successful extensions: 1308 Number of sequences better than 10.0: 5 Number of HSP's better than 10.0 without gapping: 1245 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1305 length of database: 24,988,368 effective HSP length: 83 effective length of database: 20,585,301 effective search space used: 3067209849 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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