Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brP-0612
(750 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z19156-2|CAE17940.2| 275|Caenorhabditis elegans Hypothetical pr... 38 0.008
Z19156-1|CAA79563.1| 160|Caenorhabditis elegans Hypothetical pr... 35 0.054
AC024791-32|AAY55887.1| 212|Caenorhabditis elegans Hypothetical... 34 0.094
Z82062-2|CAB04890.1| 489|Caenorhabditis elegans Hypothetical pr... 34 0.12
Z22177-12|CAA80152.1| 974|Caenorhabditis elegans Hypothetical p... 33 0.22
Z19155-5|CAA79562.1| 974|Caenorhabditis elegans Hypothetical pr... 33 0.22
U97193-14|AAB52442.2| 381|Caenorhabditis elegans Ring finger pr... 33 0.29
U41273-2|AAA82454.2| 306|Caenorhabditis elegans Hypothetical pr... 32 0.50
Z68104-2|CAA92113.1| 359|Caenorhabditis elegans Hypothetical pr... 31 0.66
L26987-1|AAA62312.1| 627|Caenorhabditis elegans par-2 protein. 31 0.66
AF106580-2|AAK71369.1| 439|Caenorhabditis elegans Abnormal embr... 31 0.66
Z92803-1|CAB07242.2| 384|Caenorhabditis elegans Hypothetical pr... 31 1.2
L07144-6|AAK21443.1| 834|Caenorhabditis elegans Temporarily ass... 31 1.2
L07144-5|AAU20841.1| 837|Caenorhabditis elegans Temporarily ass... 31 1.2
AL021487-5|CAA16350.1| 244|Caenorhabditis elegans Hypothetical ... 31 1.2
AL021487-4|CAA16351.1| 244|Caenorhabditis elegans Hypothetical ... 31 1.2
AF304126-1|AAG50239.1| 384|Caenorhabditis elegans RING and zinc... 31 1.2
U61955-7|AAV58862.1| 456|Caenorhabditis elegans Hypothetical pr... 30 2.0
U61955-6|AAC24408.2| 505|Caenorhabditis elegans Hypothetical pr... 30 2.0
U23513-5|AAP68948.1| 214|Caenorhabditis elegans Hypothetical pr... 30 2.0
U23513-4|AAP68947.1| 322|Caenorhabditis elegans Hypothetical pr... 30 2.0
U80836-7|AAB37893.3| 451|Caenorhabditis elegans Hypothetical pr... 29 4.7
U23511-13|AAC46800.1| 770|Caenorhabditis elegans Hypothetical p... 29 4.7
Z81051-12|CAB02861.2| 228|Caenorhabditis elegans Hypothetical p... 28 6.2
Z68303-8|CAA92640.2| 273|Caenorhabditis elegans Hypothetical pr... 28 6.2
Z46787-7|CAA86745.1| 235|Caenorhabditis elegans Hypothetical pr... 28 6.2
U80449-2|AAB37826.1| 112|Caenorhabditis elegans Hypothetical pr... 28 6.2
AL132876-38|CAD21663.2| 224|Caenorhabditis elegans Hypothetical... 28 6.2
U97193-12|AAB52441.1| 283|Caenorhabditis elegans Hypothetical p... 28 8.1
U67953-1|AAQ91892.1| 398|Caenorhabditis elegans Hypothetical pr... 28 8.1
U39653-1|AAM69065.2| 2471|Caenorhabditis elegans Hypothetical pr... 28 8.1
AL031633-23|CAA21030.1| 188|Caenorhabditis elegans Hypothetical... 28 8.1
>Z19156-2|CAE17940.2| 275|Caenorhabditis elegans Hypothetical
protein T02C1.2 protein.
Length = 275
Score = 37.9 bits (84), Expect = 0.008
Identities = 14/24 (58%), Positives = 16/24 (66%)
Frame = +3
Query: 6 RCGHSFCYACIIRALDLHRRCPKC 77
RC HSFC CI + L L R+CP C
Sbjct: 114 RCQHSFCKKCIDQCLPLTRKCPSC 137
>Z19156-1|CAA79563.1| 160|Caenorhabditis elegans Hypothetical
protein T02C1.1 protein.
Length = 160
Score = 35.1 bits (77), Expect = 0.054
Identities = 12/25 (48%), Positives = 17/25 (68%)
Frame = +3
Query: 9 CGHSFCYACIIRALDLHRRCPKCGA 83
CGHS+C CI L+++ +CP C A
Sbjct: 23 CGHSYCRFCIESHLNINEKCPLCRA 47
>AC024791-32|AAY55887.1| 212|Caenorhabditis elegans Hypothetical
protein Y47G6A.31 protein.
Length = 212
Score = 34.3 bits (75), Expect = 0.094
Identities = 11/23 (47%), Positives = 14/23 (60%)
Frame = +3
Query: 9 CGHSFCYACIIRALDLHRRCPKC 77
CGH+FCY+C+ L CP C
Sbjct: 54 CGHTFCYSCLFDWLKSQDTCPMC 76
>Z82062-2|CAB04890.1| 489|Caenorhabditis elegans Hypothetical
protein W02A11.3 protein.
Length = 489
Score = 33.9 bits (74), Expect = 0.12
Identities = 12/24 (50%), Positives = 16/24 (66%)
Frame = +3
Query: 6 RCGHSFCYACIIRALDLHRRCPKC 77
RC H F CI + LD+++RCP C
Sbjct: 450 RCNHVFHPECIYKWLDINKRCPMC 473
>Z22177-12|CAA80152.1| 974|Caenorhabditis elegans Hypothetical
protein F54G8.4 protein.
Length = 974
Score = 33.1 bits (72), Expect = 0.22
Identities = 14/28 (50%), Positives = 18/28 (64%), Gaps = 3/28 (10%)
Frame = +3
Query: 9 CGHSFCYACIIRALD-LHR--RCPKCGA 83
C H+FCY C+ D LHR +CP+C A
Sbjct: 58 CQHTFCYPCLESCADTLHRNLKCPECRA 85
>Z19155-5|CAA79562.1| 974|Caenorhabditis elegans Hypothetical
protein F54G8.4 protein.
Length = 974
Score = 33.1 bits (72), Expect = 0.22
Identities = 14/28 (50%), Positives = 18/28 (64%), Gaps = 3/28 (10%)
Frame = +3
Query: 9 CGHSFCYACIIRALD-LHR--RCPKCGA 83
C H+FCY C+ D LHR +CP+C A
Sbjct: 58 CQHTFCYPCLESCADTLHRNLKCPECRA 85
>U97193-14|AAB52442.2| 381|Caenorhabditis elegans Ring finger
protein protein 1 protein.
Length = 381
Score = 32.7 bits (71), Expect = 0.29
Identities = 17/47 (36%), Positives = 23/47 (48%), Gaps = 5/47 (10%)
Frame = +3
Query: 9 CGHSFCYACIIRALDL----HRRCPKCGAPLLT-XXHIFPNFLLNEL 134
CGH+FC CI + H CP C A + ++ PNF + EL
Sbjct: 41 CGHTFCTECIRNVQNYGNSPHLECPTCRAETKSNIENVAPNFSIMEL 87
>U41273-2|AAA82454.2| 306|Caenorhabditis elegans Hypothetical
protein C26B9.6 protein.
Length = 306
Score = 31.9 bits (69), Expect = 0.50
Identities = 10/23 (43%), Positives = 12/23 (52%)
Frame = +3
Query: 9 CGHSFCYACIIRALDLHRRCPKC 77
CGH FCY C+ + CP C
Sbjct: 123 CGHEFCYVCLKSNFAMGNDCPVC 145
>Z68104-2|CAA92113.1| 359|Caenorhabditis elegans Hypothetical
protein F08B12.2 protein.
Length = 359
Score = 31.5 bits (68), Expect = 0.66
Identities = 10/25 (40%), Positives = 16/25 (64%)
Frame = +3
Query: 12 GHSFCYACIIRALDLHRRCPKCGAP 86
G+ FCY CI + ++ + +CP G P
Sbjct: 324 GYVFCYTCINQYVNTYNKCPVTGCP 348
>L26987-1|AAA62312.1| 627|Caenorhabditis elegans par-2 protein.
Length = 627
Score = 31.5 bits (68), Expect = 0.66
Identities = 15/45 (33%), Positives = 21/45 (46%)
Frame = +3
Query: 9 CGHSFCYACIIRALDLHRRCPKCGAPLLTXXHIFPNFLLNELVTK 143
CGHS+C CI R R C C + + P+ L+ +V K
Sbjct: 71 CGHSYCEPCIERHTRDTRACVICKLDVGPFAAMIPSITLDNMVRK 115
>AF106580-2|AAK71369.1| 439|Caenorhabditis elegans Abnormal
embryonic partitioningof cytoplasm protein 2, isoform a
protein.
Length = 439
Score = 31.5 bits (68), Expect = 0.66
Identities = 15/45 (33%), Positives = 21/45 (46%)
Frame = +3
Query: 9 CGHSFCYACIIRALDLHRRCPKCGAPLLTXXHIFPNFLLNELVTK 143
CGHS+C CI R R C C + + P+ L+ +V K
Sbjct: 71 CGHSYCEPCIERHTRDTRACVICKLDVGPFAAMIPSITLDNMVRK 115
>Z92803-1|CAB07242.2| 384|Caenorhabditis elegans Hypothetical
protein K01G5.1 protein.
Length = 384
Score = 30.7 bits (66), Expect = 1.2
Identities = 9/25 (36%), Positives = 14/25 (56%)
Frame = +3
Query: 3 TRCGHSFCYACIIRALDLHRRCPKC 77
T+C H FC C +++ +CP C
Sbjct: 254 TKCKHYFCTGCALKSFQKSSKCPIC 278
>L07144-6|AAK21443.1| 834|Caenorhabditis elegans Temporarily
assigned gene nameprotein 84, isoform a protein.
Length = 834
Score = 30.7 bits (66), Expect = 1.2
Identities = 12/27 (44%), Positives = 15/27 (55%), Gaps = 1/27 (3%)
Frame = +3
Query: 6 RCGHSFCYACIIRALDL-HRRCPKCGA 83
+C H FC CI D R+CPKC +
Sbjct: 796 KCYHLFCETCIKTMYDTRQRKCPKCNS 822
>L07144-5|AAU20841.1| 837|Caenorhabditis elegans Temporarily
assigned gene nameprotein 84, isoform b protein.
Length = 837
Score = 30.7 bits (66), Expect = 1.2
Identities = 12/27 (44%), Positives = 15/27 (55%), Gaps = 1/27 (3%)
Frame = +3
Query: 6 RCGHSFCYACIIRALDL-HRRCPKCGA 83
+C H FC CI D R+CPKC +
Sbjct: 799 KCYHLFCETCIKTMYDTRQRKCPKCNS 825
>AL021487-5|CAA16350.1| 244|Caenorhabditis elegans Hypothetical
protein Y45F10B.9 protein.
Length = 244
Score = 30.7 bits (66), Expect = 1.2
Identities = 9/24 (37%), Positives = 15/24 (62%)
Frame = +3
Query: 6 RCGHSFCYACIIRALDLHRRCPKC 77
+CGH+ C+ C+ R ++ PKC
Sbjct: 194 KCGHTICHTCVDRIIEQSFGSPKC 217
>AL021487-4|CAA16351.1| 244|Caenorhabditis elegans Hypothetical
protein Y45F10B.8 protein.
Length = 244
Score = 30.7 bits (66), Expect = 1.2
Identities = 9/24 (37%), Positives = 15/24 (62%)
Frame = +3
Query: 6 RCGHSFCYACIIRALDLHRRCPKC 77
+CGH+ C+ C+ R ++ PKC
Sbjct: 194 KCGHTICHTCVDRIIEQSFGSPKC 217
>AF304126-1|AAG50239.1| 384|Caenorhabditis elegans RING and zinc
finger protein protein.
Length = 384
Score = 30.7 bits (66), Expect = 1.2
Identities = 9/25 (36%), Positives = 14/25 (56%)
Frame = +3
Query: 3 TRCGHSFCYACIIRALDLHRRCPKC 77
T+C H FC C +++ +CP C
Sbjct: 254 TKCKHYFCTGCALKSFQKSSKCPIC 278
>U61955-7|AAV58862.1| 456|Caenorhabditis elegans Hypothetical
protein M03D4.4b protein.
Length = 456
Score = 29.9 bits (64), Expect = 2.0
Identities = 14/35 (40%), Positives = 18/35 (51%)
Frame = -1
Query: 486 GEPLANIPHCTRAEFLQHSGDVLHVLVHEGGLPGE 382
GE PHC +A F Q H+++H GG P E
Sbjct: 91 GERSHVCPHCNKA-FFQKGHLTQHLMIHSGGRPHE 124
>U61955-6|AAC24408.2| 505|Caenorhabditis elegans Hypothetical
protein M03D4.4a protein.
Length = 505
Score = 29.9 bits (64), Expect = 2.0
Identities = 14/35 (40%), Positives = 18/35 (51%)
Frame = -1
Query: 486 GEPLANIPHCTRAEFLQHSGDVLHVLVHEGGLPGE 382
GE PHC +A F Q H+++H GG P E
Sbjct: 140 GERSHVCPHCNKA-FFQKGHLTQHLMIHSGGRPHE 173
>U23513-5|AAP68948.1| 214|Caenorhabditis elegans Hypothetical
protein D2021.2b protein.
Length = 214
Score = 29.9 bits (64), Expect = 2.0
Identities = 14/41 (34%), Positives = 20/41 (48%)
Frame = +3
Query: 21 FCYACIIRALDLHRRCPKCGAPLLTXXHIFPNFLLNELVTK 143
+C+ C IR +D + C CG + H P LN VT+
Sbjct: 49 YCFTCFIRKMDHTKHCAVCGFCVNNFDHHCP--WLNSCVTR 87
>U23513-4|AAP68947.1| 322|Caenorhabditis elegans Hypothetical
protein D2021.2a protein.
Length = 322
Score = 29.9 bits (64), Expect = 2.0
Identities = 14/41 (34%), Positives = 20/41 (48%)
Frame = +3
Query: 21 FCYACIIRALDLHRRCPKCGAPLLTXXHIFPNFLLNELVTK 143
+C+ C IR +D + C CG + H P LN VT+
Sbjct: 157 YCFTCFIRKMDHTKHCAVCGFCVNNFDHHCP--WLNSCVTR 195
>U80836-7|AAB37893.3| 451|Caenorhabditis elegans Hypothetical
protein B0432.13 protein.
Length = 451
Score = 28.7 bits (61), Expect = 4.7
Identities = 9/23 (39%), Positives = 14/23 (60%)
Frame = +3
Query: 9 CGHSFCYACIIRALDLHRRCPKC 77
CGH + + CI + + R+CP C
Sbjct: 31 CGHIYHHGCISQWIATKRQCPSC 53
>U23511-13|AAC46800.1| 770|Caenorhabditis elegans Hypothetical
protein C32D5.11 protein.
Length = 770
Score = 28.7 bits (61), Expect = 4.7
Identities = 11/25 (44%), Positives = 13/25 (52%), Gaps = 2/25 (8%)
Frame = +3
Query: 9 CGHSFCYACIIR--ALDLHRRCPKC 77
C HSFC++CI L CP C
Sbjct: 85 CNHSFCFSCISEWVCQSLRPSCPMC 109
>Z81051-12|CAB02861.2| 228|Caenorhabditis elegans Hypothetical
protein C55A6.1 protein.
Length = 228
Score = 28.3 bits (60), Expect = 6.2
Identities = 12/41 (29%), Positives = 21/41 (51%), Gaps = 1/41 (2%)
Frame = +3
Query: 9 CGHSFCYACIIRA-LDLHRRCPKCGAPLLTXXHIFPNFLLN 128
CGH FC+ C+ ++ CP C P+ + P+ +L+
Sbjct: 28 CGHKFCFICLKGVYMNDMGGCPMCRGPIDSNIFAQPSQVLD 68
>Z68303-8|CAA92640.2| 273|Caenorhabditis elegans Hypothetical
protein ZK809.7 protein.
Length = 273
Score = 28.3 bits (60), Expect = 6.2
Identities = 11/24 (45%), Positives = 13/24 (54%)
Frame = +3
Query: 6 RCGHSFCYACIIRALDLHRRCPKC 77
+CGH CY CI A + CP C
Sbjct: 231 KCGHVACYTCI--ATSRNMTCPLC 252
>Z46787-7|CAA86745.1| 235|Caenorhabditis elegans Hypothetical
protein C16C10.7 protein.
Length = 235
Score = 28.3 bits (60), Expect = 6.2
Identities = 11/26 (42%), Positives = 16/26 (61%), Gaps = 3/26 (11%)
Frame = +3
Query: 9 CGHSFCYACIIRALDL---HRRCPKC 77
CGH FC+ C+ + LD ++ CP C
Sbjct: 41 CGHLFCWPCLSQWLDTRPNNQVCPVC 66
>U80449-2|AAB37826.1| 112|Caenorhabditis elegans Hypothetical
protein R10A10.2 protein.
Length = 112
Score = 28.3 bits (60), Expect = 6.2
Identities = 9/23 (39%), Positives = 14/23 (60%)
Frame = +3
Query: 9 CGHSFCYACIIRALDLHRRCPKC 77
C HSF + C+ + + + RCP C
Sbjct: 79 CNHSFHHCCMTQWIRQNNRCPLC 101
>AL132876-38|CAD21663.2| 224|Caenorhabditis elegans Hypothetical
protein Y105E8A.14 protein.
Length = 224
Score = 28.3 bits (60), Expect = 6.2
Identities = 10/28 (35%), Positives = 16/28 (57%), Gaps = 1/28 (3%)
Frame = +3
Query: 9 CGHSFCYACIIR-ALDLHRRCPKCGAPL 89
CGH FC+ C+ ++ + CP C P+
Sbjct: 40 CGHKFCFICLKGVSVSNNGDCPICRGPI 67
>U97193-12|AAB52441.1| 283|Caenorhabditis elegans Hypothetical
protein C06A5.8a protein.
Length = 283
Score = 27.9 bits (59), Expect = 8.1
Identities = 16/50 (32%), Positives = 21/50 (42%), Gaps = 5/50 (10%)
Frame = +3
Query: 9 CGHSFCYACIIR----ALDLHRRCPKCGAPL-LTXXHIFPNFLLNELVTK 143
CGH+FC CI + CP C A + NF + EL+ K
Sbjct: 57 CGHTFCTECIKTMQKYGNSAYLECPSCRAETKCDIAAVSTNFAIMELIRK 106
>U67953-1|AAQ91892.1| 398|Caenorhabditis elegans Hypothetical
protein ZC13.1b protein.
Length = 398
Score = 27.9 bits (59), Expect = 8.1
Identities = 12/25 (48%), Positives = 12/25 (48%)
Frame = +3
Query: 9 CGHSFCYACIIRALDLHRRCPKCGA 83
C H FC CI LD CP C A
Sbjct: 352 CTHVFCKFCIETWLDQKSTCPICRA 376
>U39653-1|AAM69065.2| 2471|Caenorhabditis elegans Hypothetical
protein T13H2.5a protein.
Length = 2471
Score = 27.9 bits (59), Expect = 8.1
Identities = 11/25 (44%), Positives = 14/25 (56%), Gaps = 1/25 (4%)
Frame = +3
Query: 6 RCGHSFCYACIIRA-LDLHRRCPKC 77
+CGH FC CI+ A + CP C
Sbjct: 177 KCGHRFCDQCILVAFMRSGNTCPTC 201
>AL031633-23|CAA21030.1| 188|Caenorhabditis elegans Hypothetical
protein Y39A1A.21a protein.
Length = 188
Score = 27.9 bits (59), Expect = 8.1
Identities = 13/27 (48%), Positives = 17/27 (62%)
Frame = +3
Query: 615 KICIXRXPTSTXKXNTVVRALCLATSS 695
++CI P +T + V RAL LATSS
Sbjct: 32 RVCIPYVPATTEQLANVSRALSLATSS 58
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,580,271
Number of Sequences: 27780
Number of extensions: 174626
Number of successful extensions: 475
Number of sequences better than 10.0: 32
Number of HSP's better than 10.0 without gapping: 461
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 475
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1777507862
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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