Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brP-0611
(600 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
11_04_0388 + 17076157-17076254,17076762-17076813,17077672-170778... 99 1e-21
03_02_0665 - 10268959-10269148,10269344-10269936,10270572-102710... 87 8e-18
12_01_0038 - 312152-312748,312930-313362,313572-314440,314535-31... 81 7e-16
11_01_0039 - 290960-291086,291615-291714,291809-292013,292466-29... 80 1e-15
03_06_0476 + 34199577-34199638,34200267-34200397,34200535-342006... 61 6e-10
07_03_1076 + 23779941-23779988,23780102-23780191,23781580-237816... 58 7e-09
07_03_1774 + 29425486-29425831,29426018-29426235,29426337-294271... 52 5e-07
06_01_1006 + 7836366-7836460,7836568-7836626,7836877-7836961,783... 51 6e-07
01_01_1178 + 9385261-9385374,9385457-9385620,9386251-9386453,938... 50 1e-06
02_05_1131 - 34328168-34328557,34328838-34328957,34329067-343291... 45 4e-05
03_06_0246 + 32622793-32622804,32622883-32623057,32623395-326236... 29 2.2
03_02_0939 + 12571052-12571173,12571219-12571309,12571413-125715... 29 3.8
01_05_0658 - 24043655-24043945,24044003-24044257,24044359-240445... 28 5.0
07_01_0484 - 3643294-3643478,3644282-3644555,3644646-3645018,364... 28 6.6
02_01_0137 + 988442-988641,989088-989281,989369-989488,989594-98... 28 6.6
01_01_0323 + 2598850-2598924,2599756-2600844,2601352-2602589,260... 28 6.6
06_03_1045 - 27111771-27112097,27112205-27112330,27112434-271126... 27 8.7
>11_04_0388 +
17076157-17076254,17076762-17076813,17077672-17077867,
17078242-17078321,17078465-17078581,17078895-17078950,
17079238-17079268,17079292-17079342,17080411-17080477,
17080621-17080724,17080802-17080909,17081874-17081987
Length = 357
Score = 99 bits (238), Expect = 1e-21
Identities = 55/150 (36%), Positives = 80/150 (53%), Gaps = 3/150 (2%)
Frame = +2
Query: 95 GNNEVELSEAEAEQYDRQIRLWGLDSQKXLRAAKVLIIGLSGLGAEIAKNVILTGVKSVC 274
G E EL+ E YDRQIR+WG+D+QK L A VL+ G++G E KN++L GV S+
Sbjct: 5 GGAEEELTAQETALYDRQIRVWGVDAQKRLSKAHVLVCGMNGTTTEFCKNIVLAGVGSLS 64
Query: 275 LLDNEKLKQIDLYSQFLCPPDKI---GVNRAEGSLERXRGLNPMVDVTSHTKGVXXLPDS 445
L+D+ + + DL + FL P D+ G +RAE E + NPMV V +
Sbjct: 65 LMDDHLVTEDDLNANFLIPHDESIYGGRSRAEVCCESLKDFNPMVRVAVEKGDPSLIDGE 124
Query: 446 FFTEFDVVCATGLKQDQFXRINNACRDSNK 535
F +FD++ + IN+ CR +K
Sbjct: 125 FLDKFDIIVVSCAPIKTKLLINDNCRKRSK 154
>03_02_0665 -
10268959-10269148,10269344-10269936,10270572-10271004,
10271172-10272040,10272121-10272915,10273612-10273829,
10274931-10275230,10276834-10277161
Length = 1241
Score = 87.4 bits (207), Expect = 8e-18
Identities = 49/145 (33%), Positives = 81/145 (55%)
Frame = +2
Query: 92 VGNNEVELSEAEAEQYDRQIRLWGLDSQKXLRAAKVLIIGLSGLGAEIAKNVILTGVKSV 271
V N E++E + + + RQ+ ++G ++ + L A+ VL+ GL+GLGAEIAKN+ L GVKS+
Sbjct: 162 VSGNGSEVAEIDEDLHSRQLAVYGRETMRRLFASNVLVSGLNGLGAEIAKNLALAGVKSI 221
Query: 272 CLLDNEKLKQIDLYSQFLCPPDKIGVNRAEGSLERXRGLNPMVDVTSHTKGVXXLPDSFF 451
L D ++ DL F D IG NRA + + LN V +++ T+ L +
Sbjct: 222 TLHDMGNVEMWDLSGNFFLSEDDIGKNRAVACTAKLQELNNAVLISTLTE---DLTNEHL 278
Query: 452 TEFDVVCATGLKQDQFXRINNACRD 526
++F V T + D+ ++ CR+
Sbjct: 279 SKFQAVVFTDISLDKAFEFDDYCRN 303
Score = 45.6 bits (103), Expect = 3e-05
Identities = 27/98 (27%), Positives = 49/98 (50%), Gaps = 5/98 (5%)
Frame = +2
Query: 134 QYDRQIRLWGLDSQKXLRAAKVLIIGLSGLGAEIAKNVILTGVK-----SVCLLDNEKLK 298
+YD QI ++G QK +R A V ++G LG E KN+ L GV + + D++ ++
Sbjct: 573 RYDAQISVFGSKLQKKMRDANVFVVGSGALGCEFLKNLALMGVSCGLKGKLTITDDDIIE 632
Query: 299 QIDLYSQFLCPPDKIGVNRAEGSLERXRGLNPMVDVTS 412
+ +L QFL IG ++ + +N + + +
Sbjct: 633 KSNLSRQFLFRDWNIGQAKSTVAAAAASAINSSLHINA 670
>12_01_0038 -
312152-312748,312930-313362,313572-314440,314535-314584,
314589-315192,315674-315718,316100-316317,317020-317332,
318681-318716
Length = 1054
Score = 81.0 bits (191), Expect = 7e-16
Identities = 40/100 (40%), Positives = 66/100 (66%)
Frame = +2
Query: 119 EAEAEQYDRQIRLWGLDSQKXLRAAKVLIIGLSGLGAEIAKNVILTGVKSVCLLDNEKLK 298
E + + + RQ+ ++G ++ K L A+ VL+ GL+GLGAEIAKN++L GVKSV L D++ ++
Sbjct: 78 EIDEDLHSRQLAVYGRETMKRLFASNVLVSGLNGLGAEIAKNLVLAGVKSVTLHDDDNVE 137
Query: 299 QIDLYSQFLCPPDKIGVNRAEGSLERXRGLNPMVDVTSHT 418
DL S F +G NRA+ +++ + LN V +++ T
Sbjct: 138 LWDLSSNFFLTEKDVGQNRAQTCVQKLQELNNAVIISTIT 177
Score = 50.0 bits (114), Expect = 1e-06
Identities = 29/99 (29%), Positives = 51/99 (51%), Gaps = 5/99 (5%)
Frame = +2
Query: 125 EAEQYDRQIRLWGLDSQKXLRAAKVLIIGLSGLGAEIAKNVILTGVK-----SVCLLDNE 289
E +YD QI ++G + QK L AK+ ++G LG E KN+ L G+ + + D++
Sbjct: 445 ENTRYDAQISVFGSNLQKKLEQAKIFMVGSGALGCEFLKNLALMGISCNQNGKLTVTDDD 504
Query: 290 KLKQIDLYSQFLCPPDKIGVNRAEGSLERXRGLNPMVDV 406
+++ +L QFL IG ++ + +NP + V
Sbjct: 505 VIEKSNLSRQFLFRDWNIGQPKSTVAATAAMAINPKLHV 543
>11_01_0039 -
290960-291086,291615-291714,291809-292013,292466-292513,
295071-295646,295828-296260,296470-297338,297433-298227,
298709-298753,299135-299352,300055-300364,302715-302984
Length = 1331
Score = 80.2 bits (189), Expect = 1e-15
Identities = 40/100 (40%), Positives = 66/100 (66%)
Frame = +2
Query: 119 EAEAEQYDRQIRLWGLDSQKXLRAAKVLIIGLSGLGAEIAKNVILTGVKSVCLLDNEKLK 298
E + + + RQ+ ++G ++ K L A+ VL+ GL+GLGAEIAKN++L GVKSV L D++ ++
Sbjct: 155 EIDEDLHSRQLAVYGRETMKRLFASNVLVSGLNGLGAEIAKNLVLAGVKSVNLHDDDNVE 214
Query: 299 QIDLYSQFLCPPDKIGVNRAEGSLERXRGLNPMVDVTSHT 418
DL S F +G NRA+ +++ + LN V +++ T
Sbjct: 215 LWDLSSNFFLTEKDVGQNRAQTCVQKLQELNNAVIISTIT 254
Score = 50.0 bits (114), Expect = 1e-06
Identities = 29/99 (29%), Positives = 51/99 (51%), Gaps = 5/99 (5%)
Frame = +2
Query: 125 EAEQYDRQIRLWGLDSQKXLRAAKVLIIGLSGLGAEIAKNVILTGVK-----SVCLLDNE 289
E +YD QI ++G + QK L AK+ ++G LG E KN+ L G+ + + D++
Sbjct: 569 ENTRYDAQISVFGSNLQKKLEQAKIFMVGSGALGCEFLKNLALMGISCNQNGKLIVTDDD 628
Query: 290 KLKQIDLYSQFLCPPDKIGVNRAEGSLERXRGLNPMVDV 406
+++ +L QFL IG ++ + +NP + V
Sbjct: 629 VIEKSNLSRQFLFRDWNIGQPKSTVAATAAMAINPKLHV 667
>03_06_0476 +
34199577-34199638,34200267-34200397,34200535-34200698,
34201007-34201117,34201308-34201387,34201489-34201639,
34201736-34201829,34202421-34202509,34203672-34203745,
34203859-34204021,34204445-34204530,34205011-34205094,
34205186-34205366,34205837-34205887
Length = 506
Score = 61.3 bits (142), Expect = 6e-10
Identities = 43/146 (29%), Positives = 70/146 (47%), Gaps = 3/146 (2%)
Frame = +2
Query: 134 QYDRQIRLWGLDSQKXLRAAKVLIIGLSGLGAEIAKNVILTGVKSVCLLDNEKLKQIDLY 313
+YDRQ+R+WG Q L A + ++ G E KN++L GV SV ++D +D
Sbjct: 15 KYDRQLRIWGDQGQAALEKASICLLTCGPTGTEAMKNLVLGGVGSVTVVD------VDA- 67
Query: 314 SQFLCPPDKIGVNRAEGSLERXRGLNPMVDVTSHTKGVXXLPD---SFFTEFDVVCATGL 484
+ +G +RA+ + LN V+ + L D SFF++F VV AT L
Sbjct: 68 -------ECLGQSRAKSVCSFLQELNDAVNAKFVEESPLALIDTNPSFFSQFTVVIATQL 120
Query: 485 KQDQFXRINNACRDSNKKFICGRRLG 562
+ ++++ CR +N + R G
Sbjct: 121 PERSLLKLDDICRKANIVLVAARSYG 146
>07_03_1076 +
23779941-23779988,23780102-23780191,23781580-23781663,
23781792-23782010,23782873-23782974,23783809-23784207,
23784332-23784561,23784749-23784842,23784931-23785113,
23785254-23785351,23785831-23786143
Length = 619
Score = 57.6 bits (133), Expect = 7e-09
Identities = 33/119 (27%), Positives = 64/119 (53%), Gaps = 3/119 (2%)
Frame = +2
Query: 173 QKXLRAAKVLIIGLSGLGAEIAKNVILTGVKSVCLLDNEKLKQIDLYSQFLCPPDKIGVN 352
++ ++AAKVL++G G+G E+ K + L+G + + ++D + ++ +L QFL +G +
Sbjct: 12 EEAVKAAKVLMVGAGGIGCELLKTLALSGFRDIHIIDLDTIEVSNLNRQFLFRQSHVGQS 71
Query: 353 RAEGSLERXRGLNPMVDVTSHTKGVXXLPDS--FFTEFDVVCATGLKQ-DQFXRINNAC 520
+A + + P +++TS+ V + FF +F+VV GL D +N C
Sbjct: 72 KAHVARDAVLKFRPNINITSYHANVKDAQFNVEFFKQFNVV-LNGLDNLDARRHVNRLC 129
>07_03_1774 +
29425486-29425831,29426018-29426235,29426337-29427131,
29427206-29428074,29428317-29428749,29429263-29429859
Length = 1085
Score = 51.6 bits (118), Expect = 5e-07
Identities = 47/167 (28%), Positives = 79/167 (47%), Gaps = 27/167 (16%)
Frame = +2
Query: 101 NEVELSEAEAEQYDRQIRLWGLDSQKXLRAAKVLIIGLSGLGA----------------- 229
N V + E + + + RQ+ ++G ++ + L A+ VL+ GL+GLGA
Sbjct: 44 NGVVVPEIDEDLHSRQLAVYGRETMRRLFASHVLVSGLNGLGAEIGSSFYPLTLFVLCFF 103
Query: 230 --EIA--------KNVILTGVKSVCLLDNEKLKQIDLYSQFLCPPDKIGVNRAEGSLERX 379
+IA KN+ L GVKSV L D + ++ DL + F + IG NRA + +
Sbjct: 104 LFQIAFNCLLITTKNLALAGVKSVTLHDVKNVEMWDLSANFFLSENDIGKNRAAACVSKL 163
Query: 380 RGLNPMVDVTSHTKGVXXLPDSFFTEFDVVCATGLKQDQFXRINNAC 520
+ LN V V++ T+ L ++F V T + D+ ++ C
Sbjct: 164 QELNNAVLVSALTE---ELTTDHLSKFQAVVFTDIGLDKAYEFDDYC 207
Score = 42.7 bits (96), Expect = 2e-04
Identities = 23/69 (33%), Positives = 37/69 (53%), Gaps = 5/69 (7%)
Frame = +2
Query: 134 QYDRQIRLWGLDSQKXLRAAKVLIIGLSGLGAEIAKNVILTGVK-----SVCLLDNEKLK 298
+YD QI ++G QK L A ++G LG E KN+ L GV + + D++ ++
Sbjct: 479 RYDAQISVFGSKLQKKLEEANTFVVGSGALGCEFLKNLALMGVSCSPKGKLTITDDDVIE 538
Query: 299 QIDLYSQFL 325
+ +L QFL
Sbjct: 539 KSNLSRQFL 547
>06_01_1006 +
7836366-7836460,7836568-7836626,7836877-7836961,
7837349-7837496,7837774-7837986,7838403-7838537,
7838659-7838790,7838884-7839099,7839212-7839336,
7839787-7839844,7839977-7840087
Length = 458
Score = 51.2 bits (117), Expect = 6e-07
Identities = 25/91 (27%), Positives = 52/91 (57%)
Frame = +2
Query: 86 KMVGNNEVELSEAEAEQYDRQIRLWGLDSQKXLRAAKVLIIGLSGLGAEIAKNVILTGVK 265
++V +++ E +EQ R I+ +G++SQK + + V++IGL G+G+ A ++ +GV
Sbjct: 61 RVVATSDLLDDEVVSEQLTRNIQFFGMESQKKVTGSFVVVIGLGGVGSHAASMLLRSGVG 120
Query: 266 SVCLLDNEKLKQIDLYSQFLCPPDKIGVNRA 358
+ L+D +++ L + D +G +A
Sbjct: 121 RLLLVDFDQVSLSSLNRHAVATRDDVGTPKA 151
>01_01_1178 +
9385261-9385374,9385457-9385620,9386251-9386453,
9387130-9387362,9387584-9387640,9388120-9388241,
9388366-9388425,9388426-9388543,9389005-9389286
Length = 450
Score = 50.4 bits (115), Expect = 1e-06
Identities = 24/92 (26%), Positives = 51/92 (55%)
Frame = +2
Query: 194 KVLIIGLSGLGAEIAKNVILTGVKSVCLLDNEKLKQIDLYSQFLCPPDKIGVNRAEGSLE 373
+VL++G GLG E+ K++ L+G K++ ++D + + +L QFL +G ++AE + +
Sbjct: 48 EVLVVGAGGLGCELLKDLALSGFKNIHVIDMDTIDVSNLNRQFLFRVQDVGKSKAEVAAK 107
Query: 374 RXRGLNPMVDVTSHTKGVXXLPDSFFTEFDVV 469
R V++ H + F+++F ++
Sbjct: 108 RVMERVSGVNIVPHFCRIEDKEIEFYSQFSII 139
>02_05_1131 -
34328168-34328557,34328838-34328957,34329067-34329185,
34329659-34329767,34329847-34329885,34341125-34341203,
34341483-34341547,34341850-34341905,34342141-34342233,
34342312-34342579
Length = 445
Score = 45.2 bits (102), Expect = 4e-05
Identities = 23/96 (23%), Positives = 53/96 (55%), Gaps = 2/96 (2%)
Frame = +2
Query: 134 QYDRQIRL--WGLDSQKXLRAAKVLIIGLSGLGAEIAKNVILTGVKSVCLLDNEKLKQID 307
+Y R + L +GL+ Q+ L + +L++G GLG+ +A + GV + ++D ++++ +
Sbjct: 76 RYRRHLLLPQFGLEGQRKLSQSSILVVGAGGLGSPVAMYLAACGVGCLGIVDGDRVELDN 135
Query: 308 LYSQFLCPPDKIGVNRAEGSLERXRGLNPMVDVTSH 415
L+ Q + +G + + + R + +VD T++
Sbjct: 136 LHRQIIHIEAYVGQPKVKSTAASCRAYDIVVDATNN 171
>03_06_0246 +
32622793-32622804,32622883-32623057,32623395-32623659,
32624594-32624693,32625076-32625125,32625239-32625293,
32625742-32625774
Length = 229
Score = 29.5 bits (63), Expect = 2.2
Identities = 12/22 (54%), Positives = 15/22 (68%)
Frame = -1
Query: 363 PSARFTPILSGGHRNWEYRSIC 298
P +F I +GGH WE+RSIC
Sbjct: 182 PKPKF--IFNGGHELWEWRSIC 201
>03_02_0939 +
12571052-12571173,12571219-12571309,12571413-12571512,
12571726-12571807,12571897-12571953,12572632-12572713,
12572792-12572884,12573984-12574047,12574161-12574246,
12574329-12574430,12574526-12574609,12574885-12574945,
12575010-12575091,12575173-12575250,12575867-12575931,
12576108-12576185,12576278-12576450
Length = 499
Score = 28.7 bits (61), Expect = 3.8
Identities = 14/46 (30%), Positives = 26/46 (56%), Gaps = 1/46 (2%)
Frame = +2
Query: 140 DRQIRLWGLDSQKXLRAAKVLIIGLSGLGAEIAKNVILTGVK-SVC 274
D+Q++ W L+ K +R+ + G+ L +++LTG + SVC
Sbjct: 247 DKQVKCWDLEQNKVIRSYHGHLSGVYCLALHPTIDILLTGGRDSVC 292
>01_05_0658 -
24043655-24043945,24044003-24044257,24044359-24044530,
24044617-24044844,24045688-24045821,24045908-24045991,
24046202-24046492,24046571-24046903,24047002-24047246,
24047476-24047742,24048305-24048465,24048556-24048872,
24048966-24049247,24049325-24049626,24049699-24049789,
24049881-24049934,24050028-24050104,24050192-24050367,
24051331-24051540,24051626-24052029
Length = 1457
Score = 28.3 bits (60), Expect = 5.0
Identities = 20/63 (31%), Positives = 31/63 (49%)
Frame = +2
Query: 56 LLKL*ITALQKMVGNNEVELSEAEAEQYDRQIRLWGLDSQKXLRAAKVLIIGLSGLGAEI 235
L L +T L K G ++ +SE E ++ I LD + + I+G +G G+EI
Sbjct: 771 LFTLALTYL-KPDGKSQPSISEEELKEKQANINGNVLDVDTMASSNNLAIVGSTGTGSEI 829
Query: 236 AKN 244
A N
Sbjct: 830 ADN 832
>07_01_0484 -
3643294-3643478,3644282-3644555,3644646-3645018,
3645177-3645233,3646034-3646458
Length = 437
Score = 27.9 bits (59), Expect = 6.6
Identities = 14/61 (22%), Positives = 24/61 (39%)
Frame = -1
Query: 348 TPILSGGHRNWEYRSICFSFSLSNKHTLFTPVRITFFAISAPSPDKPMINTLAARSXFCE 169
T L+ H E +++C F+ N + + + PS ++ TLA C
Sbjct: 351 TLALADRHHAMELKAVCLKFAAENLSAVIRTEGFDYLKDNCPSLQSEILRTLAGCEEECS 410
Query: 168 S 166
S
Sbjct: 411 S 411
>02_01_0137 +
988442-988641,989088-989281,989369-989488,989594-989673,
990244-990510,990840-992458,992571-993327,993560-995506
Length = 1727
Score = 27.9 bits (59), Expect = 6.6
Identities = 10/26 (38%), Positives = 20/26 (76%)
Frame = +3
Query: 441 TASSRNLTSYVQQVSNKINSNESTML 518
+++S + SY+QQ+SN++N N S ++
Sbjct: 306 SSASSSTPSYIQQISNRMNQNISWVM 331
>01_01_0323 + 2598850-2598924,2599756-2600844,2601352-2602589,
2602637-2602810,2603032-2603098,2603735-2603757,
2603899-2604001,2604087-2604848,2605098-2605292,
2605496-2606115,2606429-2606480,2606558-2607197,
2608366-2608574,2608660-2609189,2609500-2609566,
2609651-2609728,2610415-2610483,2610569-2610643
Length = 2021
Score = 27.9 bits (59), Expect = 6.6
Identities = 11/29 (37%), Positives = 19/29 (65%)
Frame = +2
Query: 452 TEFDVVCATGLKQDQFXRINNACRDSNKK 538
+E DV C+TG+ ++ + + CRDS+ K
Sbjct: 1204 SEPDVSCSTGVVSEESLPVCSLCRDSDSK 1232
>06_03_1045 -
27111771-27112097,27112205-27112330,27112434-27112673,
27113343-27113429,27113520-27113652,27113711-27113820,
27114308-27114424,27114526-27114610,27114693-27114796,
27115530-27115612,27115729-27115819
Length = 500
Score = 27.5 bits (58), Expect = 8.7
Identities = 11/20 (55%), Positives = 14/20 (70%)
Frame = -1
Query: 564 YPRRRPQINFLLLSRQALLI 505
YPRR P I+ L+LS AL +
Sbjct: 7 YPRRHPSIHLLILSAYALFL 26
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,958,833
Number of Sequences: 37544
Number of extensions: 283668
Number of successful extensions: 727
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 702
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 726
length of database: 14,793,348
effective HSP length: 78
effective length of database: 11,864,916
effective search space used: 1435654836
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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