Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brP-0611
(600 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At4g24940.1 68417.m03572 SUMO activating enzyme 1a (SAE1a) ident... 95 4e-20
At5g50680.1 68418.m06280 SUMO activating enzyme 1b (SAE1b) ident... 90 1e-18
At5g50580.2 68418.m06266 SUMO activating enzyme, putative nearly... 90 1e-18
At5g50580.1 68418.m06265 SUMO activating enzyme, putative nearly... 90 1e-18
At2g30110.1 68415.m03664 ubiquitin activating enzyme 1 (UBA1) E1... 88 4e-18
At5g06460.1 68418.m00724 ubiquitin activating enzyme 2 (UBA2) E1... 85 3e-17
At1g05180.1 68414.m00522 auxin-resistance protein AXR1 (AXR1) id... 85 3e-17
At2g32410.1 68415.m03960 auxin-resistance protein, putative stro... 82 3e-16
At2g21470.2 68415.m02555 SUMO activating enzyme 2 (SAE2) nearly ... 57 1e-08
At2g21470.1 68415.m02554 SUMO activating enzyme 2 (SAE2) nearly ... 57 1e-08
At5g19180.1 68418.m02284 ubiquitin activating enzyme, putative (... 52 2e-07
At5g55130.1 68418.m06872 molybdenum cofactor synthesis protein 3... 44 6e-05
At5g37530.1 68418.m04520 thiF family protein similar to SP|P3013... 44 6e-05
At1g05350.1 68414.m00542 thiF family protein low similarity to S... 42 2e-04
At1g05180.2 68414.m00521 auxin-resistance protein AXR1 (AXR1) id... 32 0.25
At4g15900.1 68417.m02416 PP1/PP2A phosphatases pleiotropic regul... 29 1.8
At3g16650.1 68416.m02128 PP1/PP2A phosphatases pleiotropic regul... 29 1.8
At1g63020.1 68414.m07117 DNA-directed RNA polymerase alpha subun... 29 3.1
At5g45300.1 68418.m05561 glycosyl hydrolase family 14 protein si... 28 5.4
At2g17340.1 68415.m02003 pantothenate kinase-related contains Pf... 27 7.2
At4g35360.1 68417.m05024 pantothenate kinase family protein cont... 27 9.5
At4g00450.1 68417.m00062 expressed protein 27 9.5
At2g17320.1 68415.m02001 pantothenate kinase-related similar to ... 27 9.5
>At4g24940.1 68417.m03572 SUMO activating enzyme 1a (SAE1a)
identical to SUMO activating enzyme 1a [Arabidopsis
thaliana] GI:22652850; contains Pfam profile PF00899:
ThiF family
Length = 322
Score = 94.7 bits (225), Expect = 4e-20
Identities = 54/146 (36%), Positives = 76/146 (52%), Gaps = 3/146 (2%)
Frame = +2
Query: 110 ELSEAEAEQYDRQIRLWGLDSQKXLRAAKVLIIGLSGLGAEIAKNVILTGVKSVCLLDNE 289
EL+E E YDRQIR+WG ++Q+ L A +L+ G+ G AE KN++L GV SV L+D+
Sbjct: 5 ELTEQETALYDRQIRVWGANAQRRLTKAHILVSGIKGTVAEFCKNIVLAGVGSVTLMDDR 64
Query: 290 KLKQIDLYSQFLCPPDK---IGVNRAEGSLERXRGLNPMVDVTSHTKGVXXLPDSFFTEF 460
L + FL PPD+ G AE + + NPMV V+ + L FF +F
Sbjct: 65 LANMEALNANFLIPPDENVYSGKTVAEICSDSLKDFNPMVRVSVEKGDLSMLGTDFFEQF 124
Query: 461 DVVCATGLKQDQFXRINNACRDSNKK 538
DVV + +N CR K+
Sbjct: 125 DVVVIGYGSRATKKYVNEKCRKLKKR 150
>At5g50680.1 68418.m06280 SUMO activating enzyme 1b (SAE1b)
identical to SUMO activating enzyme 1b [Arabidopsis
thaliana] GI:22652852; nearly identical to At5g50580;
contains Pfam profile PF00899: ThiF family
Length = 320
Score = 89.8 bits (213), Expect = 1e-18
Identities = 53/145 (36%), Positives = 75/145 (51%), Gaps = 3/145 (2%)
Frame = +2
Query: 110 ELSEAEAEQYDRQIRLWGLDSQKXLRAAKVLIIGLSGLGAEIAKNVILTGVKSVCLLDNE 289
EL+E E YDRQIR+WG +Q+ L + VL+ G+ G AE KN++L GV SV LLD+
Sbjct: 5 ELTEQETALYDRQIRVWGAGAQRRLSKSHVLVSGIKGTVAEFCKNIVLAGVGSVTLLDDR 64
Query: 290 KLKQIDLYSQFLCPPDK---IGVNRAEGSLERXRGLNPMVDVTSHTKGVXXLPDSFFTEF 460
+ + FL PD+ +G AE + + NPMV V+ + L FF +F
Sbjct: 65 LVTTEVFNANFLILPDENAYVGKTVAEICCDSLKDFNPMVHVSIEKGDLSTLGVDFFEKF 124
Query: 461 DVVCATGLKQDQFXRINNACRDSNK 535
DVV + +N CR+ K
Sbjct: 125 DVVVIGYSSRATKKAVNEKCRNLAK 149
>At5g50580.2 68418.m06266 SUMO activating enzyme, putative nearly
identical to SUMO activating enzyme 1b [Arabidopsis
thaliana] GI:22652852; nearly identical to At5g50680;
contains Pfam profile PF00899: ThiF family
Length = 320
Score = 89.8 bits (213), Expect = 1e-18
Identities = 53/145 (36%), Positives = 75/145 (51%), Gaps = 3/145 (2%)
Frame = +2
Query: 110 ELSEAEAEQYDRQIRLWGLDSQKXLRAAKVLIIGLSGLGAEIAKNVILTGVKSVCLLDNE 289
EL+E E YDRQIR+WG +Q+ L + VL+ G+ G AE KN++L GV SV LLD+
Sbjct: 5 ELTEQETALYDRQIRVWGAGAQRRLSKSHVLVSGIKGTVAEFCKNIVLAGVGSVTLLDDR 64
Query: 290 KLKQIDLYSQFLCPPDK---IGVNRAEGSLERXRGLNPMVDVTSHTKGVXXLPDSFFTEF 460
+ + FL PD+ +G AE + + NPMV V+ + L FF +F
Sbjct: 65 LVTTEVFNANFLILPDENAYVGKTVAEICCDSLKDFNPMVHVSIEKGDLSTLGVDFFEKF 124
Query: 461 DVVCATGLKQDQFXRINNACRDSNK 535
DVV + +N CR+ K
Sbjct: 125 DVVVIGYSSRATKKAVNEKCRNLAK 149
>At5g50580.1 68418.m06265 SUMO activating enzyme, putative nearly
identical to SUMO activating enzyme 1b [Arabidopsis
thaliana] GI:22652852; nearly identical to At5g50680;
contains Pfam profile PF00899: ThiF family
Length = 318
Score = 89.8 bits (213), Expect = 1e-18
Identities = 53/145 (36%), Positives = 75/145 (51%), Gaps = 3/145 (2%)
Frame = +2
Query: 110 ELSEAEAEQYDRQIRLWGLDSQKXLRAAKVLIIGLSGLGAEIAKNVILTGVKSVCLLDNE 289
EL+E E YDRQIR+WG +Q+ L + VL+ G+ G AE KN++L GV SV LLD+
Sbjct: 5 ELTEQETALYDRQIRVWGAGAQRRLSKSHVLVSGIKGTVAEFCKNIVLAGVGSVTLLDDR 64
Query: 290 KLKQIDLYSQFLCPPDK---IGVNRAEGSLERXRGLNPMVDVTSHTKGVXXLPDSFFTEF 460
+ + FL PD+ +G AE + + NPMV V+ + L FF +F
Sbjct: 65 LVTTEVFNANFLILPDENAYVGKTVAEICCDSLKDFNPMVHVSIEKGDLSTLGVDFFEKF 124
Query: 461 DVVCATGLKQDQFXRINNACRDSNK 535
DVV + +N CR+ K
Sbjct: 125 DVVVIGYSSRATKKAVNEKCRNLAK 149
>At2g30110.1 68415.m03664 ubiquitin activating enzyme 1 (UBA1) E1;
identical to GB:U80808
Length = 1080
Score = 88.2 bits (209), Expect = 4e-18
Identities = 50/134 (37%), Positives = 79/134 (58%)
Frame = +2
Query: 119 EAEAEQYDRQIRLWGLDSQKXLRAAKVLIIGLSGLGAEIAKNVILTGVKSVCLLDNEKLK 298
E + + + RQ+ ++G ++ + L A+ VLI G+ GLGAEIAKN+IL GVKSV L D ++
Sbjct: 72 EIDEDLHSRQLAVYGRETMRRLFASNVLISGMHGLGAEIAKNLILAGVKSVTLHDERVVE 131
Query: 299 QIDLYSQFLCPPDKIGVNRAEGSLERXRGLNPMVDVTSHTKGVXXLPDSFFTEFDVVCAT 478
DL S F+ D +G NRA+ S+++ + LN V V+S TK L + F VV +
Sbjct: 132 LWDLSSNFVFSEDDVGKNRADASVQKLQDLNNAVVVSSLTKS---LNKEDLSGFQVVVFS 188
Query: 479 GLKQDQFXRINNAC 520
+ ++ ++ C
Sbjct: 189 DISMERAIEFDDYC 202
Score = 47.2 bits (107), Expect = 8e-06
Identities = 31/113 (27%), Positives = 54/113 (47%), Gaps = 5/113 (4%)
Frame = +2
Query: 134 QYDRQIRLWGLDSQKXLRAAKVLIIGLSGLGAEIAKNVILTGVK-----SVCLLDNEKLK 298
+YD QI ++G QK L AKV +G LG E KN+ L GV + + D++ ++
Sbjct: 474 RYDAQISVFGAKFQKKLEDAKVFTVGSGALGCEFLKNLALMGVSCGSQGKLTVTDDDIIE 533
Query: 299 QIDLYSQFLCPPDKIGVNRAEGSLERXRGLNPMVDVTSHTKGVXXLPDSFFTE 457
+ +L QFL IG ++ + +NP ++ + V ++ F +
Sbjct: 534 KSNLSRQFLFRDWNIGQAKSTVAASAAAVINPRFNIEALQNRVGAETENVFDD 586
>At5g06460.1 68418.m00724 ubiquitin activating enzyme 2 (UBA2) E1;
identical to gi:1703477
Length = 1077
Score = 85.0 bits (201), Expect = 3e-17
Identities = 50/142 (35%), Positives = 79/142 (55%)
Frame = +2
Query: 95 GNNEVELSEAEAEQYDRQIRLWGLDSQKXLRAAKVLIIGLSGLGAEIAKNVILTGVKSVC 274
GN+ E + + + RQ+ ++G ++ + L A+ VLI G+ GLG EIAKN+IL GVKSV
Sbjct: 61 GNDNSNNQEIDEDLHSRQLAVYGRETMRKLFASNVLISGMQGLGVEIAKNIILAGVKSVT 120
Query: 275 LLDNEKLKQIDLYSQFLCPPDKIGVNRAEGSLERXRGLNPMVDVTSHTKGVXXLPDSFFT 454
L D ++ DL S F+ + IG NRA S+ + + LN V V++ T L +
Sbjct: 121 LHDENVVELWDLSSNFVFTEEDIGKNRALASVHKLQELNNAVAVSTLT---GKLTKEQLS 177
Query: 455 EFDVVCATGLKQDQFXRINNAC 520
+F VV + ++ I++ C
Sbjct: 178 DFQVVVFVDISFEKATEIDDYC 199
Score = 48.8 bits (111), Expect = 3e-06
Identities = 30/113 (26%), Positives = 56/113 (49%), Gaps = 5/113 (4%)
Frame = +2
Query: 134 QYDRQIRLWGLDSQKXLRAAKVLIIGLSGLGAEIAKNVILTGVK-----SVCLLDNEKLK 298
+YD QI ++G QK L A+V ++G LG E KN+ L GV + + D++ ++
Sbjct: 471 RYDAQISVFGSTLQKKLEDARVFVVGAGALGCEFLKNLALMGVSCGTQGKLTVTDDDVIE 530
Query: 299 QIDLYSQFLCPPDKIGVNRAEGSLERXRGLNPMVDVTSHTKGVXXLPDSFFTE 457
+ +L QFL IG ++ + G+N +++ + V ++ F +
Sbjct: 531 KSNLSRQFLFRDWNIGQAKSTVAATAAAGINSRLNIDALQNRVGPETENVFDD 583
>At1g05180.1 68414.m00522 auxin-resistance protein AXR1 (AXR1)
identical to SP|P42744 Auxin-resistance protein AXR1
{Arabidopsis thaliana}; contains Pfam profile PF00899:
ThiF family; identical to cDNA ubiquitin activating
enzyme E1-related protein (AXR1) GI:304103
Length = 540
Score = 85.0 bits (201), Expect = 3e-17
Identities = 44/146 (30%), Positives = 78/146 (53%), Gaps = 3/146 (2%)
Frame = +2
Query: 134 QYDRQIRLWGLDSQKXLRAAKVLIIGLSGLGAEIAKNVILTGVKSVCLLDNEKLKQIDLY 313
+YDRQ+R+WG Q L A + ++ G+E KN++L GV S+ ++D K++ DL
Sbjct: 23 KYDRQLRIWGEVGQAALEEASICLLNCGPTGSEALKNLVLGGVGSITVVDGSKVQFGDLG 82
Query: 314 SQFLCPPDKIGVNRAEGSLERXRGLNPMVD---VTSHTKGVXXLPDSFFTEFDVVCATGL 484
+ F+ +G ++A+ + LN V+ + + + SFF++F +V AT L
Sbjct: 83 NNFMVDAKSVGQSKAKSVCAFLQELNDSVNAKFIEENPDTLITTNPSFFSQFTLVIATQL 142
Query: 485 KQDQFXRINNACRDSNKKFICGRRLG 562
+D +++ CRD+N K + R G
Sbjct: 143 VEDSMLKLDRICRDANVKLVLVRSYG 168
>At2g32410.1 68415.m03960 auxin-resistance protein, putative strong
similarity to SP|P42744 Auxin-resistance protein AXR1
{Arabidopsis thaliana}; contains Pfam profile PF00899:
ThiF family
Length = 523
Score = 81.8 bits (193), Expect = 3e-16
Identities = 42/146 (28%), Positives = 76/146 (52%), Gaps = 3/146 (2%)
Frame = +2
Query: 134 QYDRQIRLWGLDSQKXLRAAKVLIIGLSGLGAEIAKNVILTGVKSVCLLDNEKLKQIDLY 313
+YDRQ+R+WG Q L A + ++ G+E KN+++ G+ S+ ++D K++ DL
Sbjct: 7 KYDRQLRIWGELGQSALETASICLLNCGPTGSEALKNLVIGGIGSITIVDGSKVEIGDLG 66
Query: 314 SQFLCPPDKIGVNRAEGSLERXRGLNPMVD---VTSHTKGVXXLPDSFFTEFDVVCATGL 484
+ F+ +G +RA+ + LN V V + + SFF++F +V AT L
Sbjct: 67 NNFMVDAKSVGQSRAKTVCGFLQELNDSVKANFVEENPDTLISTDPSFFSQFTLVIATQL 126
Query: 485 KQDQFXRINNACRDSNKKFICGRRLG 562
+D +++ CR++N + R G
Sbjct: 127 VEDSMVKLDRICREANVMLVLARSYG 152
>At2g21470.2 68415.m02555 SUMO activating enzyme 2 (SAE2) nearly
identical to SUMO activating enzyme 2 [Arabidopsis
thaliana] GI:22652854; contains Pfam profiles PF00899:
ThiF family, PF02134: Repeat in ubiquitin-activating
(UBA) protein
Length = 700
Score = 56.8 bits (131), Expect = 1e-08
Identities = 33/119 (27%), Positives = 61/119 (51%), Gaps = 3/119 (2%)
Frame = +2
Query: 173 QKXLRAAKVLIIGLSGLGAEIAKNVILTGVKSVCLLDNEKLKQIDLYSQFLCPPDKIGVN 352
Q ++ AKVL++G G+G E+ K + L+G + + ++D + ++ +L QFL +G +
Sbjct: 7 QSAIKGAKVLMVGAGGIGCELLKTLALSGFEDIHIIDMDTIEVSNLNRQFLFRRSHVGQS 66
Query: 353 RAEGSLERXRGLNPMVDVTSHTKGV--XXLPDSFFTEFDVVCATGLKQ-DQFXRINNAC 520
+A+ + + P +++ S+ V FF +FDVV GL D +N C
Sbjct: 67 KAKVARDAVLRFRPNINIRSYHANVKNPEFDVDFFKQFDVV-LNGLDNLDARRHVNRLC 124
>At2g21470.1 68415.m02554 SUMO activating enzyme 2 (SAE2) nearly
identical to SUMO activating enzyme 2 [Arabidopsis
thaliana] GI:22652854; contains Pfam profiles PF00899:
ThiF family, PF02134: Repeat in ubiquitin-activating
(UBA) protein
Length = 625
Score = 56.8 bits (131), Expect = 1e-08
Identities = 33/119 (27%), Positives = 61/119 (51%), Gaps = 3/119 (2%)
Frame = +2
Query: 173 QKXLRAAKVLIIGLSGLGAEIAKNVILTGVKSVCLLDNEKLKQIDLYSQFLCPPDKIGVN 352
Q ++ AKVL++G G+G E+ K + L+G + + ++D + ++ +L QFL +G +
Sbjct: 7 QSAIKGAKVLMVGAGGIGCELLKTLALSGFEDIHIIDMDTIEVSNLNRQFLFRRSHVGQS 66
Query: 353 RAEGSLERXRGLNPMVDVTSHTKGV--XXLPDSFFTEFDVVCATGLKQ-DQFXRINNAC 520
+A+ + + P +++ S+ V FF +FDVV GL D +N C
Sbjct: 67 KAKVARDAVLRFRPNINIRSYHANVKNPEFDVDFFKQFDVV-LNGLDNLDARRHVNRLC 124
>At5g19180.1 68418.m02284 ubiquitin activating enzyme, putative
(ECR1) identical to putative ubiquitin activating enzyme
E1 [Arabidopsis thaliana] GI:2952433; similar to NEDD8
activating enzyme [Mus musculus] GI:17061821
Length = 454
Score = 52.4 bits (120), Expect = 2e-07
Identities = 26/97 (26%), Positives = 56/97 (57%)
Frame = +2
Query: 194 KVLIIGLSGLGAEIAKNVILTGVKSVCLLDNEKLKQIDLYSQFLCPPDKIGVNRAEGSLE 373
++L+IG GLG E+ K++ L+G +++ ++D ++++ +L QFL + +G +AE + +
Sbjct: 48 RILVIGAGGLGCELLKDLALSGFRNLEVIDMDRIEVTNLNRQFLFRIEDVGKPKAEVAAK 107
Query: 374 RXRGLNPMVDVTSHTKGVXXLPDSFFTEFDVVCATGL 484
R V++ H + F+ +F+++ A GL
Sbjct: 108 RVMERVSGVEIVPHFSRIEDKEIEFYNDFNII-ALGL 143
>At5g55130.1 68418.m06872 molybdenum cofactor synthesis protein 3 /
molybdopterin synthase sulphurylase (CNX5) identical to
SP|Q9ZNW0 Molybdenum cofactor synthesis protein 3
(Molybdopterin synthase sulfurylase) (MPT synthase
sulfurylase) {Arabidopsis thaliana}; contains Pfam
profiles PF00899: ThiF family, PF00581: Rhodanese-like
domain, PF05237: MoeZ/MoeB domain
Length = 464
Score = 44.4 bits (100), Expect = 6e-05
Identities = 31/153 (20%), Positives = 68/153 (44%), Gaps = 3/153 (1%)
Frame = +2
Query: 113 LSEAEAEQYDRQIRL--WGLDSQKXLRAAKVLIIGLSGLGAEIAKNVILTGVKSVCLLDN 286
LS + +Y RQ+ L + ++ Q L + VL+IG GLG+ + GV + ++D+
Sbjct: 64 LSPDQIYRYSRQLLLPSFAVEGQSNLLKSSVLVIGAGGLGSPALLYLAACGVGQLGIIDH 123
Query: 287 EKLKQIDLYSQFLCPPDKIGVNRAEGSLERXRGLNPMVDVTSHTKGVXXLPD-SFFTEFD 463
+ ++ +++ Q + IG + + + R +N + V + + + +++D
Sbjct: 124 DVVELNNMHRQIIHTEAFIGHPKVKSAAAACRSINSTIKVDEYVEALRTSNALEILSQYD 183
Query: 464 VVCATGLKQDQFXRINNACRDSNKKFICGRRLG 562
++ I++ C K + G LG
Sbjct: 184 IIVDATDNPPSRYMISDCCVLLGKPLVSGAALG 216
>At5g37530.1 68418.m04520 thiF family protein similar to SP|P30138
Adenylyltransferase thiF (EC 2.7.7.-) {Escherichia
coli}; contains Pfam profile PF00899: ThiF family
Length = 457
Score = 44.4 bits (100), Expect = 6e-05
Identities = 22/80 (27%), Positives = 44/80 (55%)
Frame = +2
Query: 119 EAEAEQYDRQIRLWGLDSQKXLRAAKVLIIGLSGLGAEIAKNVILTGVKSVCLLDNEKLK 298
E +E R I+ +GL+SQ + + V++IGL G+G+ A ++ +GV + L+D +++
Sbjct: 70 EIVSEHLTRNIQFFGLESQHKVTGSYVVVIGLGGVGSHAASMLLRSGVGKLLLVDFDQVS 129
Query: 299 QIDLYSQFLCPPDKIGVNRA 358
L + +G+ +A
Sbjct: 130 LSSLNRHAVATRADVGIPKA 149
>At1g05350.1 68414.m00542 thiF family protein low similarity to
SP|P30138 Adenylyltransferase thiF (EC 2.7.7.-)
{Escherichia coli}; contains Pfam profile PF00899: ThiF
family
Length = 445
Score = 42.3 bits (95), Expect = 2e-04
Identities = 21/92 (22%), Positives = 50/92 (54%)
Frame = +2
Query: 152 RLWGLDSQKXLRAAKVLIIGLSGLGAEIAKNVILTGVKSVCLLDNEKLKQIDLYSQFLCP 331
R+ +D+ + +R V I+G+ G+G+ A+ + G+ + L D + ++ ++ F
Sbjct: 70 RMGIVDNYERIREFSVAIVGIGGVGSVAAEMLTRCGIGRLLLYDYDTVELANMNRLFF-R 128
Query: 332 PDKIGVNRAEGSLERXRGLNPMVDVTSHTKGV 427
PD++G+ + + +++ +NP V + S T +
Sbjct: 129 PDQVGMTKTDAAVQTLAEINPDVVLESFTMNI 160
>At1g05180.2 68414.m00521 auxin-resistance protein AXR1 (AXR1)
identical to SP|P42744 Auxin-resistance protein AXR1
{Arabidopsis thaliana}; contains Pfam profile PF00899:
ThiF family; identical to cDNA ubiquitin activating
enzyme E1-related protein (AXR1) GI:304103
Length = 436
Score = 32.3 bits (70), Expect = 0.25
Identities = 16/42 (38%), Positives = 24/42 (57%)
Frame = +2
Query: 437 PDSFFTEFDVVCATGLKQDQFXRINNACRDSNKKFICGRRLG 562
P+ FFT +V AT L +D +++ CRD+N K + R G
Sbjct: 26 PNLFFT---LVIATQLVEDSMLKLDRICRDANVKLVLVRSYG 64
>At4g15900.1 68417.m02416 PP1/PP2A phosphatases pleiotropic
regulator 1 (PRL1) identical to PP1/PP2A phosphatases
pleiotropic regulator PRL1 (SP:Q42384) [Arabidopsis
thaliana], PRL1 [Arabidopsis thaliana] GI:577733;
contains Pfam PF00400: WD domain, G-beta repeat (7
copies)
Length = 486
Score = 29.5 bits (63), Expect = 1.8
Identities = 15/46 (32%), Positives = 26/46 (56%), Gaps = 1/46 (2%)
Frame = +2
Query: 140 DRQIRLWGLDSQKXLRAAKVLIIGLSGLGAEIAKNVILTGVK-SVC 274
D+Q++ W L+ K +R+ + G+ L +V+LTG + SVC
Sbjct: 239 DKQVKCWDLEQNKVIRSYHGHLSGVYCLALHPTLDVLLTGGRDSVC 284
>At3g16650.1 68416.m02128 PP1/PP2A phosphatases pleiotropic
regulator 2 (PRL2) identical to SP|Q39190 PP1/PP2A
phosphatases pleiotropic regulator PRL2 {Arabidopsis
thaliana}, GB:Q39190 from [Arabidopsis thaliana];
contains Pfam PF00400: WD domain, G-beta repeat (7
copies, 1 weak)
Length = 479
Score = 29.5 bits (63), Expect = 1.8
Identities = 15/46 (32%), Positives = 26/46 (56%), Gaps = 1/46 (2%)
Frame = +2
Query: 140 DRQIRLWGLDSQKXLRAAKVLIIGLSGLGAEIAKNVILTGVK-SVC 274
D+Q++ W L+ K +R+ + G+ L +V+LTG + SVC
Sbjct: 233 DKQVKCWDLEQNKVIRSYHGHLHGVYCLALHPTLDVVLTGGRDSVC 278
>At1g63020.1 68414.m07117 DNA-directed RNA polymerase alpha subunit
family protein low similarity to RNA polymerase IIA
largest subunit [Trypanosoma brucei] GI:162215; contains
InterPro accession IPR000722: RNA polymerase, alpha
subunit
Length = 1453
Score = 28.7 bits (61), Expect = 3.1
Identities = 13/44 (29%), Positives = 21/44 (47%)
Frame = +2
Query: 212 LSGLGAEIAKNVILTGVKSVCLLDNEKLKQIDLYSQFLCPPDKI 343
L LG + L V+ C L+ +++Q+ +Y F PP I
Sbjct: 486 LLSLGQDSLTAAYLVNVEKNCYLNRAQMQQLQMYCPFQLPPPAI 529
>At5g45300.1 68418.m05561 glycosyl hydrolase family 14 protein
similar to beta-amylase GI:13560977 from [Castanea
crenata]
Length = 689
Score = 27.9 bits (59), Expect = 5.4
Identities = 17/59 (28%), Positives = 29/59 (49%)
Frame = +2
Query: 287 EKLKQIDLYSQFLCPPDKIGVNRAEGSLERXRGLNPMVDVTSHTKGVXXLPDSFFTEFD 463
E LK+ + +F+CP ++ N E +L GL+ V + KG+ ++ T FD
Sbjct: 572 ETLKKYSVTVKFVCPGPQMSPNAHEEALADPEGLSWQVINAAWDKGLQIGGENAITCFD 630
>At2g17340.1 68415.m02003 pantothenate kinase-related contains Pfam
domain, PF01937: Protein of unknown function; supported
by tandem duplication of pantothenate kinase -related
protein (TIGR_Ath1:At2g17320) [Arabidopsis thaliana]
Length = 367
Score = 27.5 bits (58), Expect = 7.2
Identities = 24/83 (28%), Positives = 42/83 (50%), Gaps = 3/83 (3%)
Frame = +2
Query: 110 ELSEAEAEQYDRQIRLWGLDSQKXLRAAK---VLIIGLSGLGAEIAKNVILTGVKSVCLL 280
EL+E ++ D +L G+D+ K L A + +I LS + E+A + + V +
Sbjct: 261 ELTEILSQLKDENGQLLGVDTSKLLIANSGNDLPVIDLSRVSQELA--YLSSDADLVIVE 318
Query: 281 DNEKLKQIDLYSQFLCPPDKIGV 349
+ + +LY+QF C KIG+
Sbjct: 319 GMGRGIETNLYAQFKCDSLKIGM 341
>At4g35360.1 68417.m05024 pantothenate kinase family protein
contains Pfam domain, PF01937: Protein of unknown
function; similar to SP|Q9NVE7 Pantothenate kinase 4 (EC
2.7.1.33) (Pantothenic acid kinase 4) (hPanK4) {Homo
sapiens}
Length = 367
Score = 27.1 bits (57), Expect = 9.5
Identities = 23/84 (27%), Positives = 42/84 (50%), Gaps = 3/84 (3%)
Frame = +2
Query: 107 VELSEAEAEQYDRQIRLWGLDSQKXLRAAK---VLIIGLSGLGAEIAKNVILTGVKSVCL 277
+EL+E ++ D +L G+D+ L A + +I L+ + E+A + + V L
Sbjct: 260 IELAEILSKLNDENGQLMGVDTSNLLIANSGNDLPVIDLARVSQEVA--YLSSDADLVIL 317
Query: 278 LDNEKLKQIDLYSQFLCPPDKIGV 349
+ + +LY+QF C KIG+
Sbjct: 318 EGMGRGIETNLYAQFKCDSLKIGM 341
>At4g00450.1 68417.m00062 expressed protein
Length = 2124
Score = 27.1 bits (57), Expect = 9.5
Identities = 11/24 (45%), Positives = 14/24 (58%)
Frame = +3
Query: 519 VATATKSLSAGDVWGTYGYMFSDL 590
V K+LS GD+ Y Y+F DL
Sbjct: 433 VQALDKALSDGDIRAAYSYLFEDL 456
>At2g17320.1 68415.m02001 pantothenate kinase-related similar to
Probable pantothenate kinase 1 (Pantothenic acid kinase
1) (Swiss-Prot:Q8L5Y9) [Arabidopsis thaliana]; similar
to Pantothenate kinase 4 (Pantothenic acid kinase 4)
(hPanK4) (Swiss-Prot:Q9NVE7) [Homo sapiens]; contains
Pfam PF01937: Protein of unknown function
Length = 361
Score = 27.1 bits (57), Expect = 9.5
Identities = 24/83 (28%), Positives = 42/83 (50%), Gaps = 3/83 (3%)
Frame = +2
Query: 110 ELSEAEAEQYDRQIRLWGLDSQKXLRAAK---VLIIGLSGLGAEIAKNVILTGVKSVCLL 280
EL++ ++ D +L G+D+ K L A + +I LS + E+A + + V L
Sbjct: 255 ELTDIVSQLKDGNGQLIGVDTSKLLIANSGNDLAVIDLSRVSHELA--YLSSDADLVILE 312
Query: 281 DNEKLKQIDLYSQFLCPPDKIGV 349
+ + +LY+QF C KIG+
Sbjct: 313 GMGRGIETNLYAQFKCDSLKIGM 335
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,234,874
Number of Sequences: 28952
Number of extensions: 233660
Number of successful extensions: 698
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 673
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 691
length of database: 12,070,560
effective HSP length: 78
effective length of database: 9,812,304
effective search space used: 1187288784
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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