Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brP-0610
(750 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_UPI0000DB7271 Cluster: PREDICTED: similar to Probable c... 45 0.002
UniRef50_Q6NXR4 Cluster: Uncharacterized protein C8orf41; n=18; ... 42 0.016
UniRef50_UPI0000F1ED43 Cluster: PREDICTED: similar to Chromosome... 41 0.037
UniRef50_UPI0000E465B8 Cluster: PREDICTED: similar to CDNA seque... 36 1.4
UniRef50_Q6LQS6 Cluster: Putative uncharacterized protein BLL486... 35 1.9
UniRef50_O28565 Cluster: Type I restriction-modification enzyme,... 34 3.3
UniRef50_Q4SXM4 Cluster: Chromosome 12 SCAF12357, whole genome s... 33 7.5
UniRef50_Q8A143 Cluster: Putative uncharacterized protein; n=1; ... 33 7.5
UniRef50_Q64AA2 Cluster: ATP-binding protein; n=1; uncultured ar... 33 7.5
UniRef50_Q5HR73 Cluster: Transcriptional regulator, AraC family;... 33 9.9
>UniRef50_UPI0000DB7271 Cluster: PREDICTED: similar to Probable
cytochrome P450 304a1 (CYPCCCIVA1); n=1; Apis
mellifera|Rep: PREDICTED: similar to Probable cytochrome
P450 304a1 (CYPCCCIVA1) - Apis mellifera
Length = 879
Score = 45.2 bits (102), Expect = 0.002
Identities = 25/78 (32%), Positives = 40/78 (51%)
Frame = +3
Query: 501 STVLPLSLILMDDYLXSNKLXGLRXLFSNIGXGLTTEHFMQGNYYEVIYXSLKKXTAXKN 680
S VLP +LI++DDY+ N + GL L I + + Y EVI+ +L+ + +
Sbjct: 165 SDVLPTALIIVDDYVPENVVIGLECLHQIIQHSHLKKGLIDTGYAEVIFHALECLSHQRE 224
Query: 681 IEITKLVFECLLQLLQVL 734
+ LV+ CL LL +
Sbjct: 225 SKYVILVYVCLTSLLATI 242
>UniRef50_Q6NXR4 Cluster: Uncharacterized protein C8orf41; n=18;
Amniota|Rep: Uncharacterized protein C8orf41 - Homo
sapiens (Human)
Length = 508
Score = 41.9 bits (94), Expect = 0.016
Identities = 23/76 (30%), Positives = 37/76 (48%)
Frame = +3
Query: 507 VLPLSLILMDDYLXSNKLXGLRXLFSNIGXGLTTEHFMQGNYYEVIYXSLKKXTAXKNIE 686
VLP SL++ DDY NK+ G+ L +I + +Q N +V+Y ++
Sbjct: 248 VLPASLVISDDYQTENKILGVHCL-HHIVLNVPAADLLQYNRAQVLYHAISNHLYTPEHH 306
Query: 687 ITKLVFECLLQLLQVL 734
+ + V CLL L +L
Sbjct: 307 LIQAVLLCLLDLFPIL 322
>UniRef50_UPI0000F1ED43 Cluster: PREDICTED: similar to Chromosome 8
open reading frame 41; n=1; Danio rerio|Rep: PREDICTED:
similar to Chromosome 8 open reading frame 41 - Danio
rerio
Length = 488
Score = 40.7 bits (91), Expect = 0.037
Identities = 23/76 (30%), Positives = 37/76 (48%)
Frame = +3
Query: 507 VLPLSLILMDDYLXSNKLXGLRXLFSNIGXGLTTEHFMQGNYYEVIYXSLKKXTAXKNIE 686
V P SL++ DDY NK+ G+ L +I + Q N +V+Y +L
Sbjct: 237 VFPPSLLISDDYHIENKILGVHCL-HHIVLNVPAADLRQFNRAQVLYHTLFNHLYTSEAA 295
Query: 687 ITKLVFECLLQLLQVL 734
+ ++V CL+ LL +L
Sbjct: 296 LVQVVLPCLIDLLPIL 311
>UniRef50_UPI0000E465B8 Cluster: PREDICTED: similar to CDNA sequence
BC019943; n=1; Strongylocentrotus purpuratus|Rep:
PREDICTED: similar to CDNA sequence BC019943 -
Strongylocentrotus purpuratus
Length = 636
Score = 35.5 bits (78), Expect = 1.4
Identities = 24/78 (30%), Positives = 38/78 (48%)
Frame = +3
Query: 510 LPLSLILMDDYLXSNKLXGLRXLFSNIGXGLTTEHFMQGNYYEVIYXSLKKXTAXKNIEI 689
LP SL+ +DD+ NK+ G++ L I TE G EVIY +L ++
Sbjct: 386 LPPSLLFVDDFEMENKVLGIQCLKHIIENVDPTELRWYGR-AEVIYEALYPLMYNHKPDL 444
Query: 690 TKLVFECLLQLLQVLPSD 743
+++ C L L+V+ D
Sbjct: 445 IDVLYPCFLATLKVVEKD 462
>UniRef50_Q6LQS6 Cluster: Putative uncharacterized protein BLL4869;
n=2; Vibrionales|Rep: Putative uncharacterized protein
BLL4869 - Photobacterium profundum (Photobacterium sp.
(strain SS9))
Length = 293
Score = 35.1 bits (77), Expect = 1.9
Identities = 25/64 (39%), Positives = 34/64 (53%), Gaps = 2/64 (3%)
Frame = +2
Query: 275 EYIKPLDKSFEILYGFPLDQILYI-NIFDKKDIFNVCIKILHEKITVD-SLKKYPSLXEV 448
EYI P+D E+L LD++ I NI D + NV I K VD L P++ E+
Sbjct: 233 EYITPIDGDGEVLL---LDELALISNISDFEKAINVIISCNEIKFPVDWHLSNCPTIEEL 289
Query: 449 YSSL 460
YS+L
Sbjct: 290 YSAL 293
>UniRef50_O28565 Cluster: Type I restriction-modification enzyme, R
subunit; n=1; Archaeoglobus fulgidus|Rep: Type I
restriction-modification enzyme, R subunit -
Archaeoglobus fulgidus
Length = 957
Score = 34.3 bits (75), Expect = 3.3
Identities = 24/87 (27%), Positives = 42/87 (48%), Gaps = 2/87 (2%)
Frame = +2
Query: 224 LYEEIKSTGNWNTEECKEYIKPLDKSFEILYGF-PLDQILYINIFDKKDIF-NVCIKILH 397
LY EI++ E+ E+ + D E+ + + + L I K+D F +K +H
Sbjct: 711 LYSEIRNLYRLLLEDRIEFKEKFDLLSEVYHVYLQRENQLEAEIEQKRDQFYREALKFIH 770
Query: 398 EKITVDSLKKYPSLXEVYSSLVEKVKE 478
E I V +KK + E+ +E+VK+
Sbjct: 771 ETIDVQRIKKDYPIIEINDEFLERVKK 797
>UniRef50_Q4SXM4 Cluster: Chromosome 12 SCAF12357, whole genome
shotgun sequence; n=2; Tetraodontidae|Rep: Chromosome 12
SCAF12357, whole genome shotgun sequence - Tetraodon
nigroviridis (Green puffer)
Length = 441
Score = 33.1 bits (72), Expect = 7.5
Identities = 22/76 (28%), Positives = 36/76 (47%)
Frame = +3
Query: 507 VLPLSLILMDDYLXSNKLXGLRXLFSNIGXGLTTEHFMQGNYYEVIYXSLKKXTAXKNIE 686
+LP +L+L D + + G+ L +I Q N EV+Y +L K +
Sbjct: 248 LLPATLLLADHHRPEISVLGVGCLH-HIVLNTPAAELRQWNTAEVVYEALFKHLYATDAA 306
Query: 687 ITKLVFECLLQLLQVL 734
+ + V +CLL LL V+
Sbjct: 307 VIQPVLQCLLDLLLVV 322
>UniRef50_Q8A143 Cluster: Putative uncharacterized protein; n=1;
Bacteroides thetaiotaomicron|Rep: Putative
uncharacterized protein - Bacteroides thetaiotaomicron
Length = 94
Score = 33.1 bits (72), Expect = 7.5
Identities = 28/82 (34%), Positives = 42/82 (51%), Gaps = 5/82 (6%)
Frame = +2
Query: 191 VSSTILSNIIILYEEIKSTGNWNTEECKEYIK-----PLDKSFEILYGFPLDQILYINIF 355
+ S +L+N + L + S + T++ KEY PL++S + Y ILY I
Sbjct: 2 LQSFVLANRLCLIQHEASIPGYRTQK-KEYQMAHEHPPLNQSIYLPYWH--FSILYTYIL 58
Query: 356 DKKDIFNVCIKILHEKITVDSL 421
+K FN CI ++ KITV SL
Sbjct: 59 QEKSHFNACIPCIY-KITVKSL 79
>UniRef50_Q64AA2 Cluster: ATP-binding protein; n=1; uncultured
archaeon GZfos32E7|Rep: ATP-binding protein - uncultured
archaeon GZfos32E7
Length = 357
Score = 33.1 bits (72), Expect = 7.5
Identities = 18/56 (32%), Positives = 29/56 (51%)
Frame = +2
Query: 263 EECKEYIKPLDKSFEILYGFPLDQILYINIFDKKDIFNVCIKILHEKITVDSLKKY 430
E KEY K + K +I+ G P+ L+ IF++K+ + + E V+ KKY
Sbjct: 85 ENVKEYAKAILKDLKIIGGIPIPITLFEKIFERKERSKDVFRYI-ESFMVEISKKY 139
>UniRef50_Q5HR73 Cluster: Transcriptional regulator, AraC family;
n=2; Staphylococcus epidermidis|Rep: Transcriptional
regulator, AraC family - Staphylococcus epidermidis
(strain ATCC 35984 / RP62A)
Length = 724
Score = 32.7 bits (71), Expect = 9.9
Identities = 18/68 (26%), Positives = 38/68 (55%), Gaps = 4/68 (5%)
Frame = +2
Query: 341 YINIFDKK---DIFNVCIKI-LHEKITVDSLKKYPSLXEVYSSLVEKVKEYDG*C*SEYS 508
Y N+F ++ DI + I+ LH ++D +++ L ++++ E +K + S+Y+
Sbjct: 346 YKNLFSQEEMNDIIKIIIEYRLHVAFSIDKIEQIYELNQLFTYQYENLKIMNKCSVSDYN 405
Query: 509 ITIIFNIN 532
+ IFN+N
Sbjct: 406 VQFIFNLN 413
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 587,245,687
Number of Sequences: 1657284
Number of extensions: 9989443
Number of successful extensions: 22645
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 21910
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 22641
length of database: 575,637,011
effective HSP length: 99
effective length of database: 411,565,895
effective search space used: 61734884250
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -