Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brP-0610
         (750 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    28   0.069
AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory recept...    24   1.5  
AF264721-1|AAF75273.1|  126|Tribolium castaneum putative cytochr...    24   1.5  
AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory recept...    22   4.6  
AF265297-1|AAG17640.1|  125|Tribolium castaneum putative cytochr...    22   6.0  
AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ...    21   8.0  
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ...    21   8.0  
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ...    21   8.0  
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ...    21   8.0  

>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 28.3 bits (60), Expect = 0.069
 Identities = 14/35 (40%), Positives = 19/35 (54%), Gaps = 4/35 (11%)
 Frame = -2

Query: 695 FCNFNILXGCXLFKAXIYYF----IIISLHKMFCC 603
           +C F I     LF   IY+F    II ++H +FCC
Sbjct: 150 YCAFIIFTVHLLFLLCIYHFFCAFIIFTMHLLFCC 184



 Score = 23.4 bits (48), Expect = 2.0
 Identities = 8/30 (26%), Positives = 17/30 (56%)
 Frame = -1

Query: 429 YFFRLSTVIFSCRILMHTLKISFLSKIFMY 340
           Y+F    ++F C  ++ T+ + FL  I+ +
Sbjct: 259 YYFYYMHLLFCCAFIIFTMHLLFLLCIYYF 288


>AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory receptor
           candidate 51 protein.
          Length = 771

 Score = 23.8 bits (49), Expect = 1.5
 Identities = 8/36 (22%), Positives = 20/36 (55%)
 Frame = +3

Query: 627 NYYEVIYXSLKKXTAXKNIEITKLVFECLLQLLQVL 734
           NYY ++  +++   +    +I  ++F+C L+ +  L
Sbjct: 225 NYYRILGDTVEIFNSLFGYQIILVIFDCCLETVSAL 260


>AF264721-1|AAF75273.1|  126|Tribolium castaneum putative cytochrome
           P450 monooxigenaseCYP4Q2 protein.
          Length = 126

 Score = 23.8 bits (49), Expect = 1.5
 Identities = 14/41 (34%), Positives = 23/41 (56%)
 Frame = +2

Query: 398 EKITVDSLKKYPSLXEVYSSLVEKVKEYDG*C*SEYSITII 520
           E+   +SL+ YPS+  +  +L E V+   G    + +ITII
Sbjct: 49  ERCIKESLRLYPSVHLISRALGEDVRTQKGYLIPKDTITII 89


>AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory receptor
           candidate 61 protein.
          Length = 670

 Score = 22.2 bits (45), Expect = 4.6
 Identities = 8/21 (38%), Positives = 13/21 (61%)
 Frame = -2

Query: 701 DEFCNFNILXGCXLFKAXIYY 639
           +++CNF IL    +F   +YY
Sbjct: 319 NKYCNFIILFYLSVFVILVYY 339


>AF265297-1|AAG17640.1|  125|Tribolium castaneum putative cytochrome
           P450 monooxigenase protein.
          Length = 125

 Score = 21.8 bits (44), Expect = 6.0
 Identities = 10/30 (33%), Positives = 16/30 (53%)
 Frame = +2

Query: 398 EKITVDSLKKYPSLXEVYSSLVEKVKEYDG 487
           E+   + L+ YPS+  +  SL E +  Y G
Sbjct: 48  ERCIKEVLRLYPSVPFIARSLGEDIVTYSG 77


>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
            variant 2 protein.
          Length = 1558

 Score = 21.4 bits (43), Expect = 8.0
 Identities = 10/36 (27%), Positives = 20/36 (55%)
 Frame = -1

Query: 285  FMYSLHSSVFQLPVLFISSYNIMILLNIVELTGHSL 178
            F Y++   +F + V F    NI +++  +  TG++L
Sbjct: 947  FYYNIIPILFFMLVCFTCKSNIQLIVAQILSTGYAL 982


>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
            variant 1 protein.
          Length = 1558

 Score = 21.4 bits (43), Expect = 8.0
 Identities = 10/36 (27%), Positives = 20/36 (55%)
 Frame = -1

Query: 285  FMYSLHSSVFQLPVLFISSYNIMILLNIVELTGHSL 178
            F Y++   +F + V F    NI +++  +  TG++L
Sbjct: 947  FYYNIIPILFFMLVCFTCKSNIQLIVAQILSTGYAL 982


>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase CHS1B
            protein.
          Length = 1558

 Score = 21.4 bits (43), Expect = 8.0
 Identities = 10/36 (27%), Positives = 20/36 (55%)
 Frame = -1

Query: 285  FMYSLHSSVFQLPVLFISSYNIMILLNIVELTGHSL 178
            F Y++   +F + V F    NI +++  +  TG++L
Sbjct: 947  FYYNIIPILFFMLVCFTCKSNIQLIVAQILSTGYAL 982


>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase CHS1A
            protein.
          Length = 1558

 Score = 21.4 bits (43), Expect = 8.0
 Identities = 10/36 (27%), Positives = 20/36 (55%)
 Frame = -1

Query: 285  FMYSLHSSVFQLPVLFISSYNIMILLNIVELTGHSL 178
            F Y++   +F + V F    NI +++  +  TG++L
Sbjct: 947  FYYNIIPILFFMLVCFTCKSNIQLIVAQILSTGYAL 982


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 153,041
Number of Sequences: 336
Number of extensions: 2842
Number of successful extensions: 16
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 20027417
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)