Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brP-0610
         (750 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY705405-1|AAU12514.1|  519|Anopheles gambiae nicotinic acetylch...    25   1.9  
AY753541-1|AAV28544.1| 3398|Anopheles gambiae SGS4 protein.            25   3.3  
U51225-1|AAA96405.1|  692|Anopheles gambiae hexamerin protein.         24   4.4  
AF020872-1|AAC31875.1|  692|Anopheles gambiae hexamerin A protein.     24   4.4  
AF020871-1|AAC31874.1|  692|Anopheles gambiae hexamerin A protein.     24   4.4  
AF020870-1|AAC31873.1|  692|Anopheles gambiae hexamerin A protein.     24   4.4  

>AY705405-1|AAU12514.1|  519|Anopheles gambiae nicotinic
           acetylcholine receptor subunitbeta 1 protein.
          Length = 519

 Score = 25.4 bits (53), Expect = 1.9
 Identities = 12/49 (24%), Positives = 22/49 (44%)
 Frame = -1

Query: 486 PSYSFTFSTNEE*TSXRLGYFFRLSTVIFSCRILMHTLKISFLSKIFMY 340
           P+Y   +  N   T        R  T+ ++  +++ T+ ISFL  +  Y
Sbjct: 207 PAYLNVYEGNPTETDITFYIIIRRKTLFYTVNLILPTVLISFLCVLVFY 255


>AY753541-1|AAV28544.1| 3398|Anopheles gambiae SGS4 protein.
          Length = 3398

 Score = 24.6 bits (51), Expect = 3.3
 Identities = 16/57 (28%), Positives = 23/57 (40%)
 Frame = +2

Query: 254 WNTEECKEYIKPLDKSFEILYGFPLDQILYINIFDKKDIFNVCIKILHEKITVDSLK 424
           WN +E  E +       E  Y    + IL+ NI+   +   V I  LH  +   S K
Sbjct: 98  WNKKELNELLVAAKYHDEYGYALSNNTILFGNIYPSAEYIGV-ISRLHSVVEFSSAK 153


>U51225-1|AAA96405.1|  692|Anopheles gambiae hexamerin protein.
          Length = 692

 Score = 24.2 bits (50), Expect = 4.4
 Identities = 8/28 (28%), Positives = 17/28 (60%)
 Frame = +2

Query: 314 YGFPLDQILYINIFDKKDIFNVCIKILH 397
           +G+P D+++  N F  K+++   + I H
Sbjct: 655 FGYPFDRVINFNYFYTKNMYFKDVFIFH 682


>AF020872-1|AAC31875.1|  692|Anopheles gambiae hexamerin A protein.
          Length = 692

 Score = 24.2 bits (50), Expect = 4.4
 Identities = 8/28 (28%), Positives = 17/28 (60%)
 Frame = +2

Query: 314 YGFPLDQILYINIFDKKDIFNVCIKILH 397
           +G+P D+++  N F  K+++   + I H
Sbjct: 655 FGYPFDRVINFNYFYTKNMYFKDVFIFH 682


>AF020871-1|AAC31874.1|  692|Anopheles gambiae hexamerin A protein.
          Length = 692

 Score = 24.2 bits (50), Expect = 4.4
 Identities = 8/28 (28%), Positives = 17/28 (60%)
 Frame = +2

Query: 314 YGFPLDQILYINIFDKKDIFNVCIKILH 397
           +G+P D+++  N F  K+++   + I H
Sbjct: 655 FGYPFDRVINFNYFYTKNMYFKDVFIFH 682


>AF020870-1|AAC31873.1|  692|Anopheles gambiae hexamerin A protein.
          Length = 692

 Score = 24.2 bits (50), Expect = 4.4
 Identities = 8/28 (28%), Positives = 17/28 (60%)
 Frame = +2

Query: 314 YGFPLDQILYINIFDKKDIFNVCIKILH 397
           +G+P D+++  N F  K+++   + I H
Sbjct: 655 FGYPFDRVINFNYFYTKNMYFKDVFIFH 682


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 638,885
Number of Sequences: 2352
Number of extensions: 10351
Number of successful extensions: 34
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 33
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 34
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 77339358
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)