Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brP-0604
(700 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z99281-52|CAB16507.3| 512|Caenorhabditis elegans Hypothetical p... 31 0.60
AY130758-3|AAN61519.1| 10578|Caenorhabditis elegans 1MDa_1 prote... 31 1.0
AY130758-2|AAN61518.1| 18519|Caenorhabditis elegans 2MDa_2 prote... 31 1.0
AY130758-1|AAN61517.1| 18534|Caenorhabditis elegans 2MDa_1 prote... 31 1.0
Z49130-6|CAA88971.1| 387|Caenorhabditis elegans Hypothetical pr... 28 5.6
Z81466-6|CAB03870.1| 545|Caenorhabditis elegans Hypothetical pr... 28 7.4
Z75536-5|CAA99833.1| 545|Caenorhabditis elegans Hypothetical pr... 28 7.4
Z70038-8|CAA93887.2| 618|Caenorhabditis elegans Hypothetical pr... 28 7.4
Z68319-6|CAA92704.2| 618|Caenorhabditis elegans Hypothetical pr... 28 7.4
AY220985-1|AAO65265.1| 618|Caenorhabditis elegans putative RNA ... 28 7.4
AC024844-6|AAK29956.1| 442|Caenorhabditis elegans Hypothetical ... 28 7.4
U53151-5|AAB37068.1| 476|Caenorhabditis elegans Hypothetical pr... 27 9.8
AY551963-1|AAS65427.1| 458|Caenorhabditis elegans histone acety... 27 9.8
AF106581-4|AAC78211.1| 458|Caenorhabditis elegans Myst family h... 27 9.8
>Z99281-52|CAB16507.3| 512|Caenorhabditis elegans Hypothetical
protein Y57G11C.5 protein.
Length = 512
Score = 31.5 bits (68), Expect = 0.60
Identities = 14/38 (36%), Positives = 24/38 (63%)
Frame = -1
Query: 451 RPSYLTLMRYGTVGLDYVFTRKERASGLSRGSISHNSR 338
RPS LT YG+ GL+ + K R +GL+R + +++ +
Sbjct: 160 RPSLLTTNGYGSAGLNATWIGKTRKAGLNRFACTYHKK 197
>AY130758-3|AAN61519.1| 10578|Caenorhabditis elegans 1MDa_1 protein
protein.
Length = 10578
Score = 30.7 bits (66), Expect = 1.0
Identities = 23/77 (29%), Positives = 36/77 (46%)
Frame = +1
Query: 55 QKENLKKHRADCLSXTKADEQLVNKLKTGDFKTENEPLKKYALCMLIKSQLMTKDGKFKK 234
+K++ KH AD + D++L + K +++ LKK A L K KD K K+
Sbjct: 7276 EKDDKLKHEADAKLQKEKDDKLKQEADAKLKKEKDDRLKKDADAKLQKE----KDDKLKQ 7331
Query: 235 DVALAKVPNAEDKLKVE 285
+ +DKLK E
Sbjct: 7332 EADAKLKKEKDDKLKHE 7348
Score = 29.5 bits (63), Expect = 2.4
Identities = 22/78 (28%), Positives = 36/78 (46%)
Frame = +1
Query: 55 QKENLKKHRADCLSXTKADEQLVNKLKTGDFKTENEPLKKYALCMLIKSQLMTKDGKFKK 234
+K++ K AD + D++L + K +++ LK+ A L K KD FK+
Sbjct: 7988 EKDDKLKQEADAKLQKEKDDKLKQEADAKLKKEKDDKLKQEADAKLQKE----KDDNFKQ 8043
Query: 235 DVALAKVPNAEDKLKVEK 288
+ +DKLK EK
Sbjct: 8044 EANAKLQKEKDDKLKQEK 8061
Score = 28.7 bits (61), Expect = 4.2
Identities = 22/77 (28%), Positives = 35/77 (45%)
Frame = +1
Query: 55 QKENLKKHRADCLSXTKADEQLVNKLKTGDFKTENEPLKKYALCMLIKSQLMTKDGKFKK 234
+K++ K AD + D++L + K +++ LK+ A L K KD K K+
Sbjct: 7436 EKDDKLKQEADAKLQKEKDDKLKQEADAKLKKEKDDKLKQEADAKLKKE----KDDKLKQ 7491
Query: 235 DVALAKVPNAEDKLKVE 285
D +DKLK E
Sbjct: 7492 DADAKLQKEKDDKLKQE 7508
Score = 27.9 bits (59), Expect = 7.4
Identities = 22/78 (28%), Positives = 34/78 (43%)
Frame = +1
Query: 55 QKENLKKHRADCLSXTKADEQLVNKLKTGDFKTENEPLKKYALCMLIKSQLMTKDGKFKK 234
+K++ K AD + D++L K +++ LK A L K KD FK+
Sbjct: 7532 EKDDKLKQEADAKLKKEKDDKLKQDADAKLKKEKDDKLKHEADAKLQKE----KDDNFKQ 7587
Query: 235 DVALAKVPNAEDKLKVEK 288
+ +DKLK EK
Sbjct: 7588 EANAKLQKEKDDKLKQEK 7605
Score = 27.9 bits (59), Expect = 7.4
Identities = 23/82 (28%), Positives = 37/82 (45%), Gaps = 4/82 (4%)
Frame = +1
Query: 55 QKENLKKHRADCLSXTKADEQLVNKLKTGDFKTENEPLKKYALCMLIKSQ----LMTKDG 222
+K++ K AD + D++L + K +++ LK+ A L K + DG
Sbjct: 8220 EKDDKLKQEADAKLKKEKDDKLKQEADAKLKKDKDDKLKQEADAKLKKDKDDKLKQEADG 8279
Query: 223 KFKKDVALAKVPNAEDKLKVEK 288
K KK+ A+ KLK EK
Sbjct: 8280 KLKKEKDNKLKQEADGKLKKEK 8301
Score = 27.5 bits (58), Expect = 9.8
Identities = 25/79 (31%), Positives = 35/79 (44%), Gaps = 2/79 (2%)
Frame = +1
Query: 55 QKEN--LKKHRADCLSXTKADEQLVNKLKTGDFKTENEPLKKYALCMLIKSQLMTKDGKF 228
QKEN K AD + D++L + K +++ LK+ A L K KD K
Sbjct: 7194 QKENDDKLKQEADAKLQKENDDKLKQEADAKLQKEKDDKLKQEADAKLKKE----KDDKL 7249
Query: 229 KKDVALAKVPNAEDKLKVE 285
K+D +DKLK E
Sbjct: 7250 KQDADAKLQKEKDDKLKQE 7268
>AY130758-2|AAN61518.1| 18519|Caenorhabditis elegans 2MDa_2 protein
protein.
Length = 18519
Score = 30.7 bits (66), Expect = 1.0
Identities = 23/77 (29%), Positives = 36/77 (46%)
Frame = +1
Query: 55 QKENLKKHRADCLSXTKADEQLVNKLKTGDFKTENEPLKKYALCMLIKSQLMTKDGKFKK 234
+K++ KH AD + D++L + K +++ LKK A L K KD K K+
Sbjct: 7296 EKDDKLKHEADAKLQKEKDDKLKQEADAKLKKEKDDRLKKDADAKLQKE----KDDKLKQ 7351
Query: 235 DVALAKVPNAEDKLKVE 285
+ +DKLK E
Sbjct: 7352 EADAKLKKEKDDKLKHE 7368
Score = 29.5 bits (63), Expect = 2.4
Identities = 22/78 (28%), Positives = 36/78 (46%)
Frame = +1
Query: 55 QKENLKKHRADCLSXTKADEQLVNKLKTGDFKTENEPLKKYALCMLIKSQLMTKDGKFKK 234
+K++ K AD + D++L + K +++ LK+ A L K KD FK+
Sbjct: 8008 EKDDKLKQEADAKLQKEKDDKLKQEADAKLKKEKDDKLKQEADAKLQKE----KDDNFKQ 8063
Query: 235 DVALAKVPNAEDKLKVEK 288
+ +DKLK EK
Sbjct: 8064 EANAKLQKEKDDKLKQEK 8081
Score = 28.7 bits (61), Expect = 4.2
Identities = 22/77 (28%), Positives = 35/77 (45%)
Frame = +1
Query: 55 QKENLKKHRADCLSXTKADEQLVNKLKTGDFKTENEPLKKYALCMLIKSQLMTKDGKFKK 234
+K++ K AD + D++L + K +++ LK+ A L K KD K K+
Sbjct: 7456 EKDDKLKQEADAKLQKEKDDKLKQEADAKLKKEKDDKLKQEADAKLKKE----KDDKLKQ 7511
Query: 235 DVALAKVPNAEDKLKVE 285
D +DKLK E
Sbjct: 7512 DADAKLQKEKDDKLKQE 7528
Score = 27.9 bits (59), Expect = 7.4
Identities = 22/78 (28%), Positives = 34/78 (43%)
Frame = +1
Query: 55 QKENLKKHRADCLSXTKADEQLVNKLKTGDFKTENEPLKKYALCMLIKSQLMTKDGKFKK 234
+K++ K AD + D++L K +++ LK A L K KD FK+
Sbjct: 7552 EKDDKLKQEADAKLKKEKDDKLKQDADAKLKKEKDDKLKHEADAKLQKE----KDDNFKQ 7607
Query: 235 DVALAKVPNAEDKLKVEK 288
+ +DKLK EK
Sbjct: 7608 EANAKLQKEKDDKLKQEK 7625
Score = 27.9 bits (59), Expect = 7.4
Identities = 23/82 (28%), Positives = 37/82 (45%), Gaps = 4/82 (4%)
Frame = +1
Query: 55 QKENLKKHRADCLSXTKADEQLVNKLKTGDFKTENEPLKKYALCMLIKSQ----LMTKDG 222
+K++ K AD + D++L + K +++ LK+ A L K + DG
Sbjct: 8240 EKDDKLKQEADAKLKKEKDDKLKQEADAKLKKDKDDKLKQEADAKLKKDKDDKLKQEADG 8299
Query: 223 KFKKDVALAKVPNAEDKLKVEK 288
K KK+ A+ KLK EK
Sbjct: 8300 KLKKEKDNKLKQEADGKLKKEK 8321
Score = 27.5 bits (58), Expect = 9.8
Identities = 25/79 (31%), Positives = 35/79 (44%), Gaps = 2/79 (2%)
Frame = +1
Query: 55 QKEN--LKKHRADCLSXTKADEQLVNKLKTGDFKTENEPLKKYALCMLIKSQLMTKDGKF 228
QKEN K AD + D++L + K +++ LK+ A L K KD K
Sbjct: 7214 QKENDDKLKQEADAKLQKENDDKLKQEADAKLQKEKDDKLKQEADAKLKKE----KDDKL 7269
Query: 229 KKDVALAKVPNAEDKLKVE 285
K+D +DKLK E
Sbjct: 7270 KQDADAKLQKEKDDKLKQE 7288
>AY130758-1|AAN61517.1| 18534|Caenorhabditis elegans 2MDa_1 protein
protein.
Length = 18534
Score = 30.7 bits (66), Expect = 1.0
Identities = 23/77 (29%), Positives = 36/77 (46%)
Frame = +1
Query: 55 QKENLKKHRADCLSXTKADEQLVNKLKTGDFKTENEPLKKYALCMLIKSQLMTKDGKFKK 234
+K++ KH AD + D++L + K +++ LKK A L K KD K K+
Sbjct: 7296 EKDDKLKHEADAKLQKEKDDKLKQEADAKLKKEKDDRLKKDADAKLQKE----KDDKLKQ 7351
Query: 235 DVALAKVPNAEDKLKVE 285
+ +DKLK E
Sbjct: 7352 EADAKLKKEKDDKLKHE 7368
Score = 29.5 bits (63), Expect = 2.4
Identities = 22/78 (28%), Positives = 36/78 (46%)
Frame = +1
Query: 55 QKENLKKHRADCLSXTKADEQLVNKLKTGDFKTENEPLKKYALCMLIKSQLMTKDGKFKK 234
+K++ K AD + D++L + K +++ LK+ A L K KD FK+
Sbjct: 8008 EKDDKLKQEADAKLQKEKDDKLKQEADAKLKKEKDDKLKQEADAKLQKE----KDDNFKQ 8063
Query: 235 DVALAKVPNAEDKLKVEK 288
+ +DKLK EK
Sbjct: 8064 EANAKLQKEKDDKLKQEK 8081
Score = 28.7 bits (61), Expect = 4.2
Identities = 22/77 (28%), Positives = 35/77 (45%)
Frame = +1
Query: 55 QKENLKKHRADCLSXTKADEQLVNKLKTGDFKTENEPLKKYALCMLIKSQLMTKDGKFKK 234
+K++ K AD + D++L + K +++ LK+ A L K KD K K+
Sbjct: 7456 EKDDKLKQEADAKLQKEKDDKLKQEADAKLKKEKDDKLKQEADAKLKKE----KDDKLKQ 7511
Query: 235 DVALAKVPNAEDKLKVE 285
D +DKLK E
Sbjct: 7512 DADAKLQKEKDDKLKQE 7528
Score = 27.9 bits (59), Expect = 7.4
Identities = 22/78 (28%), Positives = 34/78 (43%)
Frame = +1
Query: 55 QKENLKKHRADCLSXTKADEQLVNKLKTGDFKTENEPLKKYALCMLIKSQLMTKDGKFKK 234
+K++ K AD + D++L K +++ LK A L K KD FK+
Sbjct: 7552 EKDDKLKQEADAKLKKEKDDKLKQDADAKLKKEKDDKLKHEADAKLQKE----KDDNFKQ 7607
Query: 235 DVALAKVPNAEDKLKVEK 288
+ +DKLK EK
Sbjct: 7608 EANAKLQKEKDDKLKQEK 7625
Score = 27.9 bits (59), Expect = 7.4
Identities = 23/82 (28%), Positives = 37/82 (45%), Gaps = 4/82 (4%)
Frame = +1
Query: 55 QKENLKKHRADCLSXTKADEQLVNKLKTGDFKTENEPLKKYALCMLIKSQ----LMTKDG 222
+K++ K AD + D++L + K +++ LK+ A L K + DG
Sbjct: 8240 EKDDKLKQEADAKLKKEKDDKLKQEADAKLKKDKDDKLKQEADAKLKKDKDDKLKQEADG 8299
Query: 223 KFKKDVALAKVPNAEDKLKVEK 288
K KK+ A+ KLK EK
Sbjct: 8300 KLKKEKDNKLKQEADGKLKKEK 8321
Score = 27.5 bits (58), Expect = 9.8
Identities = 25/79 (31%), Positives = 35/79 (44%), Gaps = 2/79 (2%)
Frame = +1
Query: 55 QKEN--LKKHRADCLSXTKADEQLVNKLKTGDFKTENEPLKKYALCMLIKSQLMTKDGKF 228
QKEN K AD + D++L + K +++ LK+ A L K KD K
Sbjct: 7214 QKENDDKLKQEADAKLQKENDDKLKQEADAKLQKEKDDKLKQEADAKLKKE----KDDKL 7269
Query: 229 KKDVALAKVPNAEDKLKVE 285
K+D +DKLK E
Sbjct: 7270 KQDADAKLQKEKDDKLKQE 7288
>Z49130-6|CAA88971.1| 387|Caenorhabditis elegans Hypothetical
protein T06D8.8 protein.
Length = 387
Score = 28.3 bits (60), Expect = 5.6
Identities = 22/69 (31%), Positives = 36/69 (52%), Gaps = 6/69 (8%)
Frame = +1
Query: 127 KLKTGDFKTENEPLKKYALCMLIKSQLMTKDGKFKKDVALAKVPNA--EDKLKVEKL--- 291
+L +++ PL+ +C+ I + TKD K K L+K+ N +DK+ V +L
Sbjct: 61 RLFVAEWELRVNPLQLVEICISIAQNIATKD-KQKSMEFLSKIGNVINKDKIAVARLHTG 119
Query: 292 -IDACLANK 315
I+A L NK
Sbjct: 120 EIEARLENK 128
>Z81466-6|CAB03870.1| 545|Caenorhabditis elegans Hypothetical
protein F18C12.3 protein.
Length = 545
Score = 27.9 bits (59), Expect = 7.4
Identities = 15/47 (31%), Positives = 24/47 (51%)
Frame = +1
Query: 148 KTENEPLKKYALCMLIKSQLMTKDGKFKKDVALAKVPNAEDKLKVEK 288
K NE + A C+ K+QLM++ + KK + K + K K E+
Sbjct: 110 KLNNELVALRATCLTAKNQLMSRIVRQKKQLESKKSQKVDGKSKEER 156
>Z75536-5|CAA99833.1| 545|Caenorhabditis elegans Hypothetical
protein F18C12.3 protein.
Length = 545
Score = 27.9 bits (59), Expect = 7.4
Identities = 15/47 (31%), Positives = 24/47 (51%)
Frame = +1
Query: 148 KTENEPLKKYALCMLIKSQLMTKDGKFKKDVALAKVPNAEDKLKVEK 288
K NE + A C+ K+QLM++ + KK + K + K K E+
Sbjct: 110 KLNNELVALRATCLTAKNQLMSRIVRQKKQLESKKSQKVDGKSKEER 156
>Z70038-8|CAA93887.2| 618|Caenorhabditis elegans Hypothetical
protein ZK1067.6 protein.
Length = 618
Score = 27.9 bits (59), Expect = 7.4
Identities = 15/41 (36%), Positives = 19/41 (46%)
Frame = +3
Query: 300 LPGQQRQQPSPNSLELCEMLPRERPEARSFLVNT*SNPTVP 422
L GQQ Q P P L LP + P+ + F + S P P
Sbjct: 481 LVGQQHQVPPPAPLGFMGQLPPQAPQPQQFWSSYPSPPISP 521
>Z68319-6|CAA92704.2| 618|Caenorhabditis elegans Hypothetical
protein ZK1067.6 protein.
Length = 618
Score = 27.9 bits (59), Expect = 7.4
Identities = 15/41 (36%), Positives = 19/41 (46%)
Frame = +3
Query: 300 LPGQQRQQPSPNSLELCEMLPRERPEARSFLVNT*SNPTVP 422
L GQQ Q P P L LP + P+ + F + S P P
Sbjct: 481 LVGQQHQVPPPAPLGFMGQLPPQAPQPQQFWSSYPSPPISP 521
>AY220985-1|AAO65265.1| 618|Caenorhabditis elegans putative RNA
binding protein SYM-2 protein.
Length = 618
Score = 27.9 bits (59), Expect = 7.4
Identities = 15/41 (36%), Positives = 19/41 (46%)
Frame = +3
Query: 300 LPGQQRQQPSPNSLELCEMLPRERPEARSFLVNT*SNPTVP 422
L GQQ Q P P L LP + P+ + F + S P P
Sbjct: 481 LVGQQHQVPPPAPLGFMGQLPPQAPQPQQFWSSYPSPPISP 521
>AC024844-6|AAK29956.1| 442|Caenorhabditis elegans Hypothetical
protein Y65B4A.1 protein.
Length = 442
Score = 27.9 bits (59), Expect = 7.4
Identities = 17/57 (29%), Positives = 25/57 (43%)
Frame = -3
Query: 599 RRKLNFGSRSNMLQQXNKIYRTDID*S*NNNTIQDCNILRYNHDIV*INTSELFNTN 429
RRKL + ++Q NKI+ D N DC ++ N + T E+ N N
Sbjct: 276 RRKLTAAQKKRYMEQQNKIFEWTPDKPRNYRPKSDCTVIVKN-----LFTQEMMNKN 327
>U53151-5|AAB37068.1| 476|Caenorhabditis elegans Hypothetical
protein T05B11.4 protein.
Length = 476
Score = 27.5 bits (58), Expect = 9.8
Identities = 16/50 (32%), Positives = 22/50 (44%)
Frame = -3
Query: 233 FLNFPSLVISCDLISIHRAYFFNGSFSVLKSPVFSLFTNCSSAFVSERQS 84
F + + C L+ + R Y F +L VF +FTN F S R S
Sbjct: 6 FFQIDNFLKICSLVEMQRIYQFILIIILLLLLVFDIFTNKPELFPSSRIS 55
>AY551963-1|AAS65427.1| 458|Caenorhabditis elegans histone
acetyltransferase protein.
Length = 458
Score = 27.5 bits (58), Expect = 9.8
Identities = 22/74 (29%), Positives = 30/74 (40%), Gaps = 2/74 (2%)
Frame = +1
Query: 58 KENLKKHRADCLSXTKADEQLVNKLKTGDFKTENEPLKKYA--LCMLIKSQLMTKDGKFK 231
K LK+H C Q+ + K F+ + K YA LC+L K L K +
Sbjct: 214 KTCLKRHMEKCAMCHPPGNQIYSHDKLSFFEIDGRKNKSYAQNLCLLAKLFLDHKTLYYD 273
Query: 232 KDVALAKVPNAEDK 273
D L V ED+
Sbjct: 274 TDPFLFYVLTEEDE 287
>AF106581-4|AAC78211.1| 458|Caenorhabditis elegans Myst family
histone acetyltransferase-like protein 1 protein.
Length = 458
Score = 27.5 bits (58), Expect = 9.8
Identities = 22/74 (29%), Positives = 30/74 (40%), Gaps = 2/74 (2%)
Frame = +1
Query: 58 KENLKKHRADCLSXTKADEQLVNKLKTGDFKTENEPLKKYA--LCMLIKSQLMTKDGKFK 231
K LK+H C Q+ + K F+ + K YA LC+L K L K +
Sbjct: 214 KTCLKRHMEKCAMCHPPGNQIYSHDKLSFFEIDGRKNKSYAQNLCLLAKLFLDHKTLYYD 273
Query: 232 KDVALAKVPNAEDK 273
D L V ED+
Sbjct: 274 TDPFLFYVLTEEDE 287
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,452,070
Number of Sequences: 27780
Number of extensions: 294847
Number of successful extensions: 853
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 789
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 847
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1613473434
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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