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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brP-0602
         (700 letters)

Database: spombe 
           5004 sequences; 2,362,478 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SPBPJ4664.02 |||glycoprotein |Schizosaccharomyces pombe|chr 2|||...    33   0.052
SPBC1D7.02c |scr1||transcription factor Scr1|Schizosaccharomyces...    29   0.48 
SPAC19G12.16c |adg2|SPAC23A1.01c, mug46|conserved fungal protein...    29   0.85 
SPAC1F7.11c |||transcription factor zf-fungal binuclear cluster ...    28   1.1  
SPCC16C4.07 |scw1||RNA-binding protein Scw1|Schizosaccharomyces ...    27   2.0  
SPAPB15E9.01c ||SPAPB18E9.06c|sequence orphan|Schizosaccharomyce...    27   2.0  
SPCC1442.06 |||20S proteasome component alpha 2|Schizosaccharomy...    26   4.5  
SPBC29A10.08 |||1,3-beta-glucanosyltransferase |Schizosaccharomy...    26   4.5  
SPBP16F5.08c |||flavin dependent monooxygenase |Schizosaccharomy...    26   4.5  
SPAPB1E7.04c |||chitinase |Schizosaccharomyces pombe|chr 1|||Manual    26   4.5  
SPBC947.01 |||AAA family ATPase, unknown biological role|Schizos...    26   6.0  
SPAC17C9.03 |tif471||translation initiation factor eIF4G |Schizo...    25   7.9  
SPAC12B10.03 |||WD repeat protein, human WDR20 family|Schizosacc...    25   7.9  
SPCP1E11.05c |||sterol O-acyltransferase |Schizosaccharomyces po...    25   7.9  

>SPBPJ4664.02 |||glycoprotein |Schizosaccharomyces pombe|chr
           2|||Manual
          Length = 3971

 Score = 32.7 bits (71), Expect = 0.052
 Identities = 18/54 (33%), Positives = 27/54 (50%)
 Frame = +1

Query: 502 TDSAARPPVRSPTLARSVVTLIPKIAVNTTSVSXALPASTVAPSEPFSRSETPT 663
           T S   P + S   + S +   P +A++T+S +    AST A +   SRS  PT
Sbjct: 299 TTSNTSPQISSTISSSSFIVESPSVALSTSSTTTITNASTPAANTIISRSSKPT 352


>SPBC1D7.02c |scr1||transcription factor Scr1|Schizosaccharomyces
           pombe|chr 2|||Manual
          Length = 565

 Score = 29.5 bits (63), Expect = 0.48
 Identities = 18/56 (32%), Positives = 27/56 (48%)
 Frame = +1

Query: 520 PPVRSPTLARSVVTLIPKIAVNTTSVSXALPASTVAPSEPFSRSETPTALVTAXTP 687
           P +RS +L  S V LIP +  +  + S + PAS      P S S +  + V +  P
Sbjct: 439 PSIRSLSLRPSQVPLIPPLKCDPNAFSASTPASGAVSRTPSSVSLSSLSNVNSSMP 494


>SPAC19G12.16c |adg2|SPAC23A1.01c, mug46|conserved fungal
           protein|Schizosaccharomyces pombe|chr 1|||Manual
          Length = 670

 Score = 28.7 bits (61), Expect = 0.85
 Identities = 24/75 (32%), Positives = 37/75 (49%), Gaps = 11/75 (14%)
 Frame = +1

Query: 502 TDSAARPPVRSPTLARSVVT---LIPKIAVNTTSV-------SXALPASTVAPSEPFSRS 651
           TD    PP  S T + S +T   +IP  +  TT+        S  LP+S ++ +   S S
Sbjct: 184 TDIVTLPPPASSTSSFSTITNTSMIPSSSSFTTTTGSPYYNTSSFLPSSVISSASLSSSS 243

Query: 652 ETPTALVTA-XTPKT 693
             PT+++T+  TP T
Sbjct: 244 VLPTSIITSTSTPVT 258


>SPAC1F7.11c |||transcription factor zf-fungal binuclear cluster
           type |Schizosaccharomyces pombe|chr 1|||Manual
          Length = 782

 Score = 28.3 bits (60), Expect = 1.1
 Identities = 16/48 (33%), Positives = 22/48 (45%), Gaps = 6/48 (12%)
 Frame = +3

Query: 150 ISCDKYWKCDN----GVAELKTCGNGLAFDATDS--KYLTENCDYLHN 275
           + CD+ W C+N    G+  L  C NG+    +D   K L    D L N
Sbjct: 30  LKCDRVWPCENCKKRGIPNL--CPNGILVSVSDKLIKLLLSRIDTLQN 75


>SPCC16C4.07 |scw1||RNA-binding protein Scw1|Schizosaccharomyces
           pombe|chr 3|||Manual
          Length = 561

 Score = 27.5 bits (58), Expect = 2.0
 Identities = 17/49 (34%), Positives = 22/49 (44%)
 Frame = +1

Query: 499 QTDSAARPPVRSPTLARSVVTLIPKIAVNTTSVSXALPASTVAPSEPFS 645
           Q  SA  P  R  +   +  T  P     +TS      AST++PS PFS
Sbjct: 348 QNSSAQSPHPRVFSANSAFSTTSPPPLTPSTSRDYPFSASTISPSTPFS 396


>SPAPB15E9.01c ||SPAPB18E9.06c|sequence orphan|Schizosaccharomyces
           pombe|chr 1|||Manual
          Length = 1036

 Score = 27.5 bits (58), Expect = 2.0
 Identities = 25/87 (28%), Positives = 37/87 (42%), Gaps = 3/87 (3%)
 Frame = +1

Query: 400 PPAIXAAPDLPTTXSPASACGLIRFRSAKTNXXQTDSAARPPVRSPTLARSVVT---LIP 570
           P +  + P   +T +P S      F +  T+   T SA+ P   S  +  S  T      
Sbjct: 632 PTSSASTPLSNSTVAPTSTFTSSGFNT--TSGLPTSSASTPSSNSSIVPTSTFTSSGFNT 689

Query: 571 KIAVNTTSVSXALPASTVAPSEPFSRS 651
              + T+S S  L  STVAP+  F+ S
Sbjct: 690 TSGLPTSSASTPLSNSTVAPTSTFTSS 716


>SPCC1442.06 |||20S proteasome component alpha 2|Schizosaccharomyces
           pombe|chr 3|||Manual
          Length = 245

 Score = 26.2 bits (55), Expect = 4.5
 Identities = 14/41 (34%), Positives = 20/41 (48%)
 Frame = -3

Query: 614 AGNAXETDVVFTAIFGMSVTTERASVGDLTGGRAAESVCXL 492
           A NA  T V   A  G+ + TE+    +L  G + E VC +
Sbjct: 27  AVNAGVTSVGIKATDGVVLATEKKPTSELAIGASLEKVCAI 67


>SPBC29A10.08 |||1,3-beta-glucanosyltransferase |Schizosaccharomyces
           pombe|chr 2|||Manual
          Length = 459

 Score = 26.2 bits (55), Expect = 4.5
 Identities = 14/37 (37%), Positives = 17/37 (45%)
 Frame = +3

Query: 174 CDNGVAELKTCGNGLAFDATDSKYLTENCDYLHNVEC 284
           C N V  LK   NG    +  S+ L+E C Y  N  C
Sbjct: 374 CSNAVKNLKCSANGTPSGSKISQVLSELC-YYDNKAC 409


>SPBP16F5.08c |||flavin dependent monooxygenase |Schizosaccharomyces
           pombe|chr 2|||Manual
          Length = 447

 Score = 26.2 bits (55), Expect = 4.5
 Identities = 11/20 (55%), Positives = 15/20 (75%)
 Frame = -1

Query: 679 SQLPVPSXSPILKTVPMGQP 620
           ++LPVPS +PIL T P+  P
Sbjct: 55  NKLPVPSTNPILTTEPIVGP 74


>SPAPB1E7.04c |||chitinase |Schizosaccharomyces pombe|chr 1|||Manual
          Length = 1236

 Score = 26.2 bits (55), Expect = 4.5
 Identities = 38/179 (21%), Positives = 77/179 (43%), Gaps = 14/179 (7%)
 Frame = +1

Query: 199 KPAVTVSLSTPQIPNXXXXXXXXXXXLSAERGHSSSPQSPLPTVRDCTA---SSLMKXXX 369
           +P  +V+ S+  +P+           +S+    +SSPQS L T  +  +   S+L+    
Sbjct: 458 QPTASVASSSVSVPSSSSVQPQSSTPISSSSS-ASSPQSTLSTSSEVVSEVSSTLLSGSS 516

Query: 370 XXXXXXXXXKPPAIXAAP---------DLPTTXSPASACGLIRFRS--AKTNXXQTDSAA 516
                       +I ++P          +PT+ S   +  +    S  + ++   T S+ 
Sbjct: 517 AIPSTSSSTPSSSIISSPMTSVLSSSSSIPTSSSSDFSSSITTISSGISSSSIPSTFSSV 576

Query: 517 RPPVRSPTLARSVVTLIPKIAVNTTSVSXALPASTVAPSEPFSRSETPTALVTAXTPKT 693
              + S T + S  +L   I+ ++TS + +  AST +PS   S   + + ++++ TP T
Sbjct: 577 SSILSSSTSSPSSTSL--SISSSSTSSTFS-SASTSSPSSISSSISSSSTILSSPTPST 632


>SPBC947.01 |||AAA family ATPase, unknown biological
           role|Schizosaccharomyces pombe|chr 2|||Manual
          Length = 660

 Score = 25.8 bits (54), Expect = 6.0
 Identities = 19/53 (35%), Positives = 27/53 (50%)
 Frame = +1

Query: 508 SAARPPVRSPTLARSVVTLIPKIAVNTTSVSXALPASTVAPSEPFSRSETPTA 666
           S+ RP   S   A S  T  P  A + T VS  + AST   +EP  ++ TP++
Sbjct: 310 SSTRPS--SADTAGSPATSPPATADSKTIVSKTISASTTQQTEPLQQT-TPSS 359


>SPAC17C9.03 |tif471||translation initiation factor eIF4G
           |Schizosaccharomyces pombe|chr 1|||Manual
          Length = 1403

 Score = 25.4 bits (53), Expect = 7.9
 Identities = 12/18 (66%), Positives = 14/18 (77%)
 Frame = +1

Query: 613 ASTVAPSEPFSRSETPTA 666
           AS+  PSE  SR+ETPTA
Sbjct: 495 ASSPNPSETNSRAETPTA 512


>SPAC12B10.03 |||WD repeat protein, human WDR20
           family|Schizosaccharomyces pombe|chr 1|||Manual
          Length = 543

 Score = 25.4 bits (53), Expect = 7.9
 Identities = 14/33 (42%), Positives = 19/33 (57%), Gaps = 1/33 (3%)
 Frame = -2

Query: 276 RCEGSRSSRSS-IWNLWRRKRDRYRRFSVRLHR 181
           RC+G +S  +  I++ WR   D YR  SV L R
Sbjct: 401 RCQGHKSWVTDVIFDAWRCDDDNYRIASVGLDR 433


>SPCP1E11.05c |||sterol O-acyltransferase |Schizosaccharomyces
           pombe|chr 3|||Manual
          Length = 472

 Score = 25.4 bits (53), Expect = 7.9
 Identities = 8/14 (57%), Positives = 9/14 (64%)
 Frame = +3

Query: 348 FPDENKCDVFWNCW 389
           F D N  D +WNCW
Sbjct: 350 FADRNFYDDWWNCW 363


  Database: spombe
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 2,362,478
  Number of sequences in database:  5004
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,577,838
Number of Sequences: 5004
Number of extensions: 50401
Number of successful extensions: 197
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 174
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 197
length of database: 2,362,478
effective HSP length: 71
effective length of database: 2,007,194
effective search space used: 323158234
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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