Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brP-0602
(700 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_12083| Best HMM Match : No HMM Matches (HMM E-Value=.) 62 6e-10
SB_43832| Best HMM Match : CBM_14 (HMM E-Value=2.8e-16) 37 0.014
SB_58974| Best HMM Match : No HMM Matches (HMM E-Value=.) 37 0.018
SB_1784| Best HMM Match : CBM_14 (HMM E-Value=7e-18) 36 0.032
SB_39550| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.042
SB_58073| Best HMM Match : CBM_14 (HMM E-Value=1.4e-17) 35 0.073
SB_2441| Best HMM Match : CBM_14 (HMM E-Value=2.1e-09) 35 0.073
SB_10326| Best HMM Match : CBM_14 (HMM E-Value=5.3e-15) 34 0.13
SB_58074| Best HMM Match : CBM_14 (HMM E-Value=2.7e-14) 33 0.17
SB_48765| Best HMM Match : A1pp (HMM E-Value=3.5e-34) 33 0.17
SB_15696| Best HMM Match : DUF282 (HMM E-Value=2.5) 33 0.17
SB_8083| Best HMM Match : Lectin_C (HMM E-Value=3.8e-22) 33 0.17
SB_1052| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.17
SB_59006| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.39
SB_38764| Best HMM Match : CBM_14 (HMM E-Value=1.5e-10) 32 0.51
SB_23047| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.51
SB_51569| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.51
SB_52309| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.68
SB_54736| Best HMM Match : TF_Otx (HMM E-Value=1.7) 31 0.68
SB_55307| Best HMM Match : HEAT (HMM E-Value=2.4e-11) 31 0.90
SB_27121| Best HMM Match : CBM_14 (HMM E-Value=5.8e-29) 31 1.2
SB_5780| Best HMM Match : EGF_CA (HMM E-Value=0) 31 1.2
SB_50768| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.6
SB_44060| Best HMM Match : CBM_14 (HMM E-Value=1.5e-10) 30 1.6
SB_46921| Best HMM Match : Endomucin (HMM E-Value=6.3) 30 1.6
SB_54795| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.1
SB_47112| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.1
SB_39072| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.1
SB_14296| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.1
SB_11987| Best HMM Match : OTU (HMM E-Value=1.1e-24) 29 2.7
SB_21575| Best HMM Match : Trypsin (HMM E-Value=0) 29 2.7
SB_8084| Best HMM Match : EGF_CA (HMM E-Value=2.8026e-45) 29 2.7
SB_54954| Best HMM Match : zf-RanBP (HMM E-Value=2.1) 29 4.8
SB_44302| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.8
SB_13694| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.8
SB_26886| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.3
SB_53929| Best HMM Match : Amelogenin (HMM E-Value=3.6) 28 6.3
SB_18656| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.3
SB_16587| Best HMM Match : Cytadhesin_P30 (HMM E-Value=0.69) 28 6.3
SB_10557| Best HMM Match : GCC2_GCC3 (HMM E-Value=7.2e-15) 28 6.3
SB_3108| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.3
SB_47732| Best HMM Match : Pkinase (HMM E-Value=0.0016) 28 8.4
SB_21308| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.4
SB_12832| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.4
SB_47132| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.4
SB_19246| Best HMM Match : CPL (HMM E-Value=5.99994e-41) 28 8.4
SB_16814| Best HMM Match : HNF-1A_C (HMM E-Value=2.9) 28 8.4
>SB_12083| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1671
Score = 61.7 bits (143), Expect = 6e-10
Identities = 51/207 (24%), Positives = 77/207 (37%), Gaps = 19/207 (9%)
Frame = +3
Query: 132 GFYPHHISCDKYWKCDNGVAELKTCGNGLAFDATDSKYLTENCDYLHNVECGERTQLEP- 308
G Y +C+ + C NG C + L +D + C++ V+CG+R + P
Sbjct: 524 GKYADANNCNGFVMCSNGYIYYMDCPSNLRYDPAKGR-----CEWADTVDCGQRPTISPH 578
Query: 309 ------------PISTPHCS-RLYGIFPDENKCDVFWNCWNGXASRYXCSPGLAYDRXSR 449
P +P C + G + D + C+ F C NG A + C L +D
Sbjct: 579 PPKPTTMPPQPTPPKSPFCEEKKNGDYADPSNCNGFITCSNGYAYKRDCPFNLKFDTKKL 638
Query: 450 VCMWADQVPECKNE*XANGFGC-PAP----GEVSNAGSFSRHAHPEDCRKYYICLXGVAR 614
C W ++V CK+ + P P E R+ P +C Y +C G
Sbjct: 639 ECEWPNKV-NCKSRPTTVPYVTKPTPPSGNSEFCKKNGNGRYRDPHNCLGYIVCRGGNIY 697
Query: 615 EYGCPIGTVFKIGDXDGTGNCEXPENV 695
C G F T C+ P NV
Sbjct: 698 FRNCRRGLRFN----GVTKRCDLPRNV 720
Score = 58.0 bits (134), Expect = 7e-09
Identities = 53/207 (25%), Positives = 71/207 (34%), Gaps = 19/207 (9%)
Frame = +3
Query: 132 GFYPHHISCDKYWKCDNGVAELKTCGNGLAFDATDSKYLTENCDYLHNVECGER---TQL 302
G Y +C+ + C N + C L F+ T T++CD NV+CG T
Sbjct: 449 GDYQDPDACEGFISCSNHITYHMPCPENLRFNPT-----TKHCDNPENVQCGPTRPPTPK 503
Query: 303 EPPIS------TPHC-SRLYGIFPDENKCDVFWNCWNGXASRYXCSPGLAYDRXSRVCMW 461
PP + +P C + G + D N C+ F C NG C L YD C W
Sbjct: 504 VPPTTKAPFTKSPFCVGKQNGKYADANNCNGFVMCSNGYIYYMDCPSNLRYDPAKGRCEW 563
Query: 462 ADQV---------PECKNE*XANGFGCPAPGEVSNAGSFSRHAHPEDCRKYYICLXGVAR 614
AD V P P +A P +C + C G A
Sbjct: 564 ADTVDCGQRPTISPHPPKPTTMPPQPTPPKSPFCEEKKNGDYADPSNCNGFITCSNGYAY 623
Query: 615 EYGCPIGTVFKIGDXDGTGNCEXPENV 695
+ CP F + CE P V
Sbjct: 624 KRDCPFNLKFDTKKLE----CEWPNKV 646
Score = 38.7 bits (86), Expect = 0.004
Identities = 34/127 (26%), Positives = 55/127 (43%), Gaps = 5/127 (3%)
Frame = +3
Query: 279 ECGERTQLE--PPISTPHCS-RLYGIFPDENKCDVFWNCWNGX--ASRYXCSPGLAYDRX 443
+C R QL P + + C+ R G + D + C+++ C NG A+R+ C GLA++
Sbjct: 298 KCYIRKQLPNLPLVDSNFCTERQDGNYADSSNCNLYITCSNGFTIANRH-CPTGLAFNEA 356
Query: 444 SRVCMWADQVPECKNE*XANGFGCPAPGEVSNAGSFSRHAHPEDCRKYYICLXGVAREYG 623
+C + VP C +GF C + S + +C + +C G
Sbjct: 357 IGMCDYPSNVPGCSGS-SGSGF-C-------HEKSDGNYKDSGNCHGFIMCSNGHTYHMT 407
Query: 624 CPIGTVF 644
CP T F
Sbjct: 408 CPGQTNF 414
>SB_43832| Best HMM Match : CBM_14 (HMM E-Value=2.8e-16)
Length = 518
Score = 37.1 bits (82), Expect = 0.014
Identities = 15/44 (34%), Positives = 23/44 (52%)
Frame = +3
Query: 342 GIFPDENKCDVFWNCWNGXASRYXCSPGLAYDRXSRVCMWADQV 473
GI+ ++ C F C G A + C PGL ++ VC W+ +V
Sbjct: 464 GIYAEKENCYGFVLCGGGIAHKKTCPPGLIFNTDLMVCDWSHEV 507
Score = 35.1 bits (77), Expect = 0.055
Identities = 19/51 (37%), Positives = 25/51 (49%)
Frame = +3
Query: 132 GFYPHHISCDKYWKCDNGVAELKTCGNGLAFDATDSKYLTENCDYLHNVEC 284
G Y +C + C G+A KTC GL F+ TD CD+ H V+C
Sbjct: 464 GIYAEKENCYGFVLCGGGIAHKKTCPPGLIFN-TDLMV----CDWSHEVKC 509
Score = 28.7 bits (61), Expect = 4.8
Identities = 10/29 (34%), Positives = 17/29 (58%)
Frame = +3
Query: 558 HAHPEDCRKYYICLXGVAREYGCPIGTVF 644
+A E+C + +C G+A + CP G +F
Sbjct: 466 YAEKENCYGFVLCGGGIAHKKTCPPGLIF 494
>SB_58974| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1831
Score = 36.7 bits (81), Expect = 0.018
Identities = 29/103 (28%), Positives = 42/103 (40%), Gaps = 2/103 (1%)
Frame = +3
Query: 21 LSCQDLFRNMNSRCXXXXXXXXXXXXXQESFKCPDD-FGFYPHHISCDKYWKCDN-GVAE 194
L CQ L N + C ++ C D G+Y C ++++CD A
Sbjct: 753 LHCQTL--NPDGSCTVVQNFAVVNAMCVDTTFCKDKPNGYYADPRDCSRFYQCDAFHRAF 810
Query: 195 LKTCGNGLAFDATDSKYLTENCDYLHNVECGERTQLEPPISTP 323
L C GL + T + CD+ NV+C +T PP TP
Sbjct: 811 LHRCSPGLKWSITKT-----TCDWPRNVDCDRKTP-TPPSPTP 847
Score = 31.5 bits (68), Expect = 0.68
Identities = 21/65 (32%), Positives = 31/65 (47%), Gaps = 2/65 (3%)
Frame = +3
Query: 132 GFYPHHISCDKYWKCDNGVAE--LKTCGNGLAFDATDSKYLTENCDYLHNVECGERTQLE 305
G+Y C +++ C G AE L C GL + + + CDY H V+C T
Sbjct: 574 GYYADPKDCAQFYFC-YGSAESLLSRCPRGLLWSV-----VKKTCDYPHLVDCSRPT--T 625
Query: 306 PPIST 320
PP++T
Sbjct: 626 PPVTT 630
Score = 28.3 bits (60), Expect = 6.3
Identities = 16/56 (28%), Positives = 22/56 (39%), Gaps = 2/56 (3%)
Frame = +3
Query: 312 ISTPHCS-RLYGIFPDENKCDVFWNCWN-GXASRYXCSPGLAYDRXSRVCMWADQV 473
+ T C + G + D C F+ C A + CSPGL + C W V
Sbjct: 778 VDTTFCKDKPNGYYADPRDCSRFYQCDAFHRAFLHRCSPGLKWSITKTTCDWPRNV 833
>SB_1784| Best HMM Match : CBM_14 (HMM E-Value=7e-18)
Length = 123
Score = 35.9 bits (79), Expect = 0.032
Identities = 16/47 (34%), Positives = 23/47 (48%)
Frame = +3
Query: 558 HAHPEDCRKYYICLXGVAREYGCPIGTVFKIGDXDGTGNCEXPENVP 698
+AHPE+C+ Y C + E CP G + D C+ P+N P
Sbjct: 70 YAHPENCKMYITCSNKITYERQCPAG----LNWNDAKKWCDWPKNAP 112
Score = 31.1 bits (67), Expect = 0.90
Identities = 18/56 (32%), Positives = 27/56 (48%)
Frame = +3
Query: 132 GFYPHHISCDKYWKCDNGVAELKTCGNGLAFDATDSKYLTENCDYLHNVECGERTQ 299
G Y H +C Y C N + + C GL ++ D+K + CD+ N C E+ Q
Sbjct: 68 GDYAHPENCKMYITCSNKITYERQCPAGLNWN--DAK---KWCDWPKNAPCEEKCQ 118
>SB_39550| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 158
Score = 35.5 bits (78), Expect = 0.042
Identities = 31/100 (31%), Positives = 41/100 (41%), Gaps = 3/100 (3%)
Frame = +1
Query: 397 KPPAIXAAPDLPTTXSPASACGLIRFRSAKTNXXQTDSAARPPVRSPTLARSVVTL-IPK 573
KP P P+ +P S + T T S P +PT A T PK
Sbjct: 28 KPTPTTHTPTKPSPTTPTSTAP-----TQTTPTPTTPSPTAPTQTTPTPATPTPTTPTPK 82
Query: 574 IAVNTTS-VSXALPASTVAPSEPFSRSETPTA-LVTAXTP 687
TTS ++ PA+T P++P + TPT TA TP
Sbjct: 83 TPTPTTSTLTKPTPATTPTPTKPTPTAHTPTTPTPTAHTP 122
>SB_58073| Best HMM Match : CBM_14 (HMM E-Value=1.4e-17)
Length = 225
Score = 34.7 bits (76), Expect = 0.073
Identities = 19/51 (37%), Positives = 24/51 (47%)
Frame = +3
Query: 132 GFYPHHISCDKYWKCDNGVAELKTCGNGLAFDATDSKYLTENCDYLHNVEC 284
G YPH C Y C NG+A C GL ++ + KY CD+ N C
Sbjct: 92 GNYPHPDFCKMYIACSNGIAYEMPCPAGLNWN-DEKKY----CDWPFNAPC 137
Score = 34.7 bits (76), Expect = 0.073
Identities = 16/47 (34%), Positives = 22/47 (46%)
Frame = +3
Query: 558 HAHPEDCRKYYICLXGVAREYGCPIGTVFKIGDXDGTGNCEXPENVP 698
+ HP+ C+ Y C G+A E CP G + D C+ P N P
Sbjct: 94 YPHPDFCKMYIACSNGIAYEMPCPAG----LNWNDEKKYCDWPFNAP 136
Score = 33.5 bits (73), Expect = 0.17
Identities = 16/55 (29%), Positives = 25/55 (45%)
Frame = +3
Query: 312 ISTPHCSRLYGIFPDENKCDVFWNCWNGXASRYXCSPGLAYDRXSRVCMWADQVP 476
+ST +R G +P + C ++ C NG A C GL ++ + C W P
Sbjct: 82 LSTICKNRADGNYPHPDFCKMYIACSNGIAYEMPCPAGLNWNDEKKYCDWPFNAP 136
>SB_2441| Best HMM Match : CBM_14 (HMM E-Value=2.1e-09)
Length = 98
Score = 34.7 bits (76), Expect = 0.073
Identities = 15/54 (27%), Positives = 26/54 (48%), Gaps = 1/54 (1%)
Frame = +3
Query: 312 ISTPHCS-RLYGIFPDENKCDVFWNCWNGXASRYXCSPGLAYDRXSRVCMWADQ 470
+S+ C + G++ DE F C+NG C+ GL ++ ++C DQ
Sbjct: 2 LSSNFCKVKTSGVYADEKNPSKFVICYNGVREERECAKGLVFNPKEKICEQPDQ 55
>SB_10326| Best HMM Match : CBM_14 (HMM E-Value=5.3e-15)
Length = 134
Score = 33.9 bits (74), Expect = 0.13
Identities = 13/37 (35%), Positives = 17/37 (45%)
Frame = +3
Query: 351 PDENKCDVFWNCWNGXASRYXCSPGLAYDRXSRVCMW 461
PD C +++C G A R C PG +D C W
Sbjct: 32 PDSTSCQHYYHCTWGKAVRKDCGPGRVWDPRITNCNW 68
Score = 29.1 bits (62), Expect = 3.6
Identities = 12/31 (38%), Positives = 15/31 (48%)
Frame = +3
Query: 135 FYPHHISCDKYWKCDNGVAELKTCGNGLAFD 227
+ P SC Y+ C G A K CG G +D
Sbjct: 30 YLPDSTSCQHYYHCTWGKAVRKDCGPGRVWD 60
>SB_58074| Best HMM Match : CBM_14 (HMM E-Value=2.7e-14)
Length = 480
Score = 33.5 bits (73), Expect = 0.17
Identities = 12/26 (46%), Positives = 14/26 (53%)
Frame = +3
Query: 558 HAHPEDCRKYYICLXGVAREYGCPIG 635
+AHP C Y C G+A E CP G
Sbjct: 344 YAHPSKCDMYITCSNGIAHEMPCPAG 369
Score = 31.9 bits (69), Expect = 0.51
Identities = 16/44 (36%), Positives = 21/44 (47%)
Frame = +3
Query: 132 GFYPHHISCDKYWKCDNGVAELKTCGNGLAFDATDSKYLTENCD 263
G Y H CD Y C NG+A C GL ++ +T+ CD
Sbjct: 342 GNYAHPSKCDMYITCSNGIAHEMPCPAGLNWND-----VTKECD 380
Score = 31.5 bits (68), Expect = 0.68
Identities = 12/38 (31%), Positives = 20/38 (52%)
Frame = +3
Query: 342 GIFPDENKCDVFWNCWNGXASRYXCSPGLAYDRXSRVC 455
G + +KCD++ C NG A C GL ++ ++ C
Sbjct: 342 GNYAHPSKCDMYITCSNGIAHEMPCPAGLNWNDVTKEC 379
>SB_48765| Best HMM Match : A1pp (HMM E-Value=3.5e-34)
Length = 354
Score = 33.5 bits (73), Expect = 0.17
Identities = 24/77 (31%), Positives = 39/77 (50%)
Frame = +1
Query: 466 IRFRSAKTNXXQTDSAARPPVRSPTLARSVVTLIPKIAVNTTSVSXALPASTVAPSEPFS 645
++ + A + QTD ARPP + PT S T + A +T S + A PA+ +P+
Sbjct: 222 LQVKPAAESNAQTDRNARPPTK-PTADLSQRTQSIQ-AADTRSRAQAKPATGPSPTADKQ 279
Query: 646 RSETPTALVTAXTPKTF 696
++ P+ L+ PK F
Sbjct: 280 VADPPSRLLGGARPKEF 296
>SB_15696| Best HMM Match : DUF282 (HMM E-Value=2.5)
Length = 128
Score = 33.5 bits (73), Expect = 0.17
Identities = 18/48 (37%), Positives = 25/48 (52%)
Frame = +1
Query: 541 LARSVVTLIPKIAVNTTSVSXALPASTVAPSEPFSRSETPTALVTAXT 684
L V TL+ A+ T +PASTV+ S P RS P+ ++A T
Sbjct: 38 LEMDVPTLLAPCALATAPSVSEVPASTVSSSSPLRRSPGPSGTISAST 85
>SB_8083| Best HMM Match : Lectin_C (HMM E-Value=3.8e-22)
Length = 3445
Score = 33.5 bits (73), Expect = 0.17
Identities = 26/102 (25%), Positives = 45/102 (44%), Gaps = 5/102 (4%)
Frame = +1
Query: 403 PAIXAAP--DLPTTXSPASACGLIRFRSAKTNXXQTDSAARPPVRSPTLARSVVTLIPKI 576
P + AP D PTT SPA++ + T + +A T + +++P+
Sbjct: 295 PELTEAPQTDYPTTASPATSPSTVAQERETTMAHEATAAPATTTAPETTVITETSVVPET 354
Query: 577 AVNTTSV-SXALPASTVAP--SEPFSRSETPTALVTAXTPKT 693
T + + + P +T+AP +E + ET A T P+T
Sbjct: 355 LKTTMAAETTSAPETTLAPESTENATAPETTIAPETTMAPET 396
>SB_1052| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1092
Score = 33.5 bits (73), Expect = 0.17
Identities = 29/100 (29%), Positives = 44/100 (44%), Gaps = 5/100 (5%)
Frame = +1
Query: 400 PPAIXAAPDLPTTXSPASACGLIRFRSAKTNXXQT-DSAARPPVRS--PTLARSVVTLIP 570
PP P T + C +SA+++ Q+ +S+ PP R PTL +P
Sbjct: 358 PPKRRIVPTPSPTDIDSKPCE--NNKSAESSKQQSLNSSEVPPKRRIIPTLVIGSKCPVP 415
Query: 571 KIAVNTTSVSXALPASTVA--PSEPFSRSETPTALVTAXT 684
+ N+ S ALP +A P P S+ PTA+ + T
Sbjct: 416 DASENSAEKSKALPVKRIAPLPISPGGFSDNPTAICSEST 455
>SB_59006| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1211
Score = 32.3 bits (70), Expect = 0.39
Identities = 30/95 (31%), Positives = 41/95 (43%), Gaps = 5/95 (5%)
Frame = +1
Query: 424 DLPTTXSPASACGLIRFRSAKTNXXQTDSAARPPVRSP-TLARSVVTLIPKI--AVNTTS 594
++ TT +P + + +T +AA +P T A T P+ A TTS
Sbjct: 654 EIETTMTPETNAAPETTSAPETTAAPETTAAPETTAAPETTAAPETTAAPETTAAPETTS 713
Query: 595 VSX--ALPASTVAPSEPFSRSETPTALVTAXTPKT 693
S A P +T AP E + SET L T PKT
Sbjct: 714 ASETTAAPETTTAP-ETTAASETTAVLETTAAPKT 747
Score = 31.1 bits (67), Expect = 0.90
Identities = 47/185 (25%), Positives = 67/185 (36%), Gaps = 17/185 (9%)
Frame = +1
Query: 190 PN*KPAVTVSLSTPQIPNXXXXXXXXXXXLSAERGHSSSPQSPLPTVRDCTASSLMKXXX 369
P P +TV+ T +P +AE ++ P+ PLP + T S+
Sbjct: 406 PKKAPGITVAPETTVVPETTVASET-----TAETHQTTYPRDPLPEMFVTTQSNTATETT 460
Query: 370 XXXXXXXXXKPPAIXAAPDLP-TTXSPASACGLIRFRSAKTNXXQTDSAARPPVRSP--- 537
+ A P TT +P SA + +T +AA +P
Sbjct: 461 EAPETTAEPETTAAPETTVEPETTKAPESAAAPETTKEPETTAAPDTTAAPETTVAPETT 520
Query: 538 ----TLARSVVTLIPK--IAVNTTSV--SXALPASTVAP-----SEPFSRSETPTALVTA 678
T A T P+ +A TT + A P +T AP SE + SET A T
Sbjct: 521 IAPETTATPETTAAPETTVAPETTMTPETTAAPETTTAPETTAASETTAASETTAAPKTT 580
Query: 679 XTPKT 693
PKT
Sbjct: 581 AAPKT 585
>SB_38764| Best HMM Match : CBM_14 (HMM E-Value=1.5e-10)
Length = 155
Score = 31.9 bits (69), Expect = 0.51
Identities = 24/84 (28%), Positives = 40/84 (47%), Gaps = 1/84 (1%)
Frame = +3
Query: 102 QESFKCPDDFGFYPHHISCDKYWKCDN-GVAELKTCGNGLAFDATDSKYLTENCDYLHNV 278
++ F D G Y C KY++CD+ +TC + L + A + CD+ +V
Sbjct: 67 EDDFCKERDAGCYVDLKDCSKYYQCDDFHKTHHRTCSDQLKWSA-----VKNICDHAADV 121
Query: 279 ECGERTQLEPPISTPHCSRLYGIF 350
+C +R L+P + P S GI+
Sbjct: 122 DC-DRKPLKPRV--PDRSEKVGIW 142
>SB_23047| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1601
Score = 31.9 bits (69), Expect = 0.51
Identities = 19/60 (31%), Positives = 26/60 (43%)
Frame = +3
Query: 105 ESFKCPDDFGFYPHHISCDKYWKCDNGVAELKTCGNGLAFDATDSKYLTENCDYLHNVEC 284
E F G Y C Y++C G + K C +GL F+A L ++CD V C
Sbjct: 225 EKFCAGKTDGTYADPKDCSAYYQCKKGRSFKKFCPDGLKFNA-----LIKSCDEPSKVNC 279
Score = 31.1 bits (67), Expect = 0.90
Identities = 18/48 (37%), Positives = 22/48 (45%), Gaps = 1/48 (2%)
Frame = +3
Query: 504 GFGCPAPGEVSNAGSFS-RHAHPEDCRKYYICLXGVAREYGCPIGTVF 644
G PA E AG +A P+DC YY C G + + CP G F
Sbjct: 217 GKATPAEDEKFCAGKTDGTYADPKDCSAYYQCKKGRSFKKFCPDGLKF 264
>SB_51569| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 899
Score = 31.9 bits (69), Expect = 0.51
Identities = 19/78 (24%), Positives = 34/78 (43%)
Frame = +1
Query: 433 TTXSPASACGLIRFRSAKTNXXQTDSAARPPVRSPTLARSVVTLIPKIAVNTTSVSXALP 612
TT P + + + ++ Q + P +SPT S I NTT + A
Sbjct: 592 TTQLPTTQLPTTQMPTTQSPTAQMSTTQSPTAQSPTAQMSTTDAGDIIRGNTTQLPTAQM 651
Query: 613 ASTVAPSEPFSRSETPTA 666
++T +P+ +++PTA
Sbjct: 652 STTQSPTTQLPTTQSPTA 669
>SB_52309| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 386
Score = 31.5 bits (68), Expect = 0.68
Identities = 27/108 (25%), Positives = 45/108 (41%), Gaps = 3/108 (2%)
Frame = +3
Query: 153 SCDKYWKCDNGVAELKT-CGNGLAFDATDSKYLTENCDYLHNVECGERTQLEPPISTPHC 329
+CDK KC+N + C G + + + + E C N C + + I + HC
Sbjct: 107 TCDKNAKCNNTIGSYHCMCNPGFSGNGRNCTDIDE-C-VTGNHACDKNARCRNNIGSHHC 164
Query: 330 SRLYGIFPDENKCDVFWNCWNGXASRYXCSP-GLAYDR-XSRVCMWAD 467
+ G + + CD C + + + CSP + Y+ S VC D
Sbjct: 165 TCKSGFYGNGASCDDIDECRD---ASHKCSPHAICYNTLGSFVCSCKD 209
>SB_54736| Best HMM Match : TF_Otx (HMM E-Value=1.7)
Length = 123
Score = 31.5 bits (68), Expect = 0.68
Identities = 17/41 (41%), Positives = 23/41 (56%)
Frame = +1
Query: 562 LIPKIAVNTTSVSXALPASTVAPSEPFSRSETPTALVTAXT 684
L P+ SVS +PASTV+ S P RS P+ ++A T
Sbjct: 19 LAPRAFATAPSVSE-VPASTVSSSSPLRRSPGPSGTISAST 58
>SB_55307| Best HMM Match : HEAT (HMM E-Value=2.4e-11)
Length = 1552
Score = 31.1 bits (67), Expect = 0.90
Identities = 19/63 (30%), Positives = 29/63 (46%), Gaps = 1/63 (1%)
Frame = -2
Query: 363 CFHQGRCRTVSNSGEWRLGARAVSSLRTQRCE-GSRSSRSSIWNLWRRKRDRYRRFSVRL 187
C+H + E RL A A+ L +QRC+ + + S +W+ R + FS L
Sbjct: 493 CYHGLSSAQLLQVHELRLLAHALLILSSQRCDTRTEKNLGSTLQVWQSFLSRVKHFSSFL 552
Query: 186 HRC 178
RC
Sbjct: 553 RRC 555
>SB_27121| Best HMM Match : CBM_14 (HMM E-Value=5.8e-29)
Length = 339
Score = 30.7 bits (66), Expect = 1.2
Identities = 21/69 (30%), Positives = 32/69 (46%), Gaps = 1/69 (1%)
Frame = +3
Query: 126 DFGFYPHHISCDKYWKCDN-GVAELKTCGNGLAFDATDSKYLTENCDYLHNVECGERTQL 302
D G Y C KY++CD+ +TC L + A + CD+ +V+C +R L
Sbjct: 26 DAGCYVDLKDCSKYYQCDDFHKTHHRTCSEQLKWSA-----VKNICDHAADVDC-DRKPL 79
Query: 303 EPPISTPHC 329
+P HC
Sbjct: 80 KPRCDL-HC 87
>SB_5780| Best HMM Match : EGF_CA (HMM E-Value=0)
Length = 263
Score = 30.7 bits (66), Expect = 1.2
Identities = 21/82 (25%), Positives = 30/82 (36%), Gaps = 1/82 (1%)
Frame = +3
Query: 153 SCDKYWKCDNGVAELK-TCGNGLAFDATDSKYLTENCDYLHNVECGERTQLEPPISTPHC 329
+CDK KCDN + C G + D + + E H C + + I + HC
Sbjct: 86 TCDKNAKCDNTIGSYHCMCNPGFSGDGRECTDIDECVTGDHT--CDKNAKCNNIIGSYHC 143
Query: 330 SRLYGIFPDENKCDVFWNCWNG 395
+ G D C C G
Sbjct: 144 TCNPGFSGDGRNCTDIDECLTG 165
>SB_50768| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1069
Score = 30.3 bits (65), Expect = 1.6
Identities = 20/70 (28%), Positives = 29/70 (41%)
Frame = +1
Query: 427 LPTTXSPASACGLIRFRSAKTNXXQTDSAARPPVRSPTLARSVVTLIPKIAVNTTSVSXA 606
LPT+ +PA+ S K +T P S + S T P + + TS + A
Sbjct: 143 LPTSSTPATQNPTDSSLSTKPPTKKTGETQSPTENSISTEESATTPTPSGSTSPTSPNNA 202
Query: 607 LPASTVAPSE 636
P S+ P E
Sbjct: 203 SPQSSTRPGE 212
>SB_44060| Best HMM Match : CBM_14 (HMM E-Value=1.5e-10)
Length = 64
Score = 30.3 bits (65), Expect = 1.6
Identities = 19/62 (30%), Positives = 31/62 (50%), Gaps = 1/62 (1%)
Frame = +3
Query: 126 DFGFYPHHISCDKYWKCDN-GVAELKTCGNGLAFDATDSKYLTENCDYLHNVECGERTQL 302
D G Y C KY++CD+ +TC + L + A + CD+ +V+C +R L
Sbjct: 8 DAGCYVDLKDCSKYYQCDDFHKTHHRTCSDQLKWSA-----VKNICDHAADVDC-DRKPL 61
Query: 303 EP 308
+P
Sbjct: 62 KP 63
>SB_46921| Best HMM Match : Endomucin (HMM E-Value=6.3)
Length = 312
Score = 30.3 bits (65), Expect = 1.6
Identities = 20/66 (30%), Positives = 28/66 (42%)
Frame = +1
Query: 502 TDSAARPPVRSPTLARSVVTLIPKIAVNTTSVSXALPASTVAPSEPFSRSETPTALVTAX 681
T S + +P S T++P A T+S S ST P+E S P+
Sbjct: 56 THSTSPTVQTTPAFTTSPATILPPTAKTTSSTS-----STSKPTEDVGTSPQPSTENETH 110
Query: 682 TPKTFP 699
TP T+P
Sbjct: 111 TPTTYP 116
>SB_54795| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1220
Score = 29.9 bits (64), Expect = 2.1
Identities = 24/88 (27%), Positives = 35/88 (39%), Gaps = 3/88 (3%)
Frame = +3
Query: 372 VFWNCWNGXASRYXCSPG-LAYDRXSRVCMWADQVPECKNE*XANGFGCPAPGEVSNAGS 548
++ C + + C L+Y S VC W+ + A F CP G V AG
Sbjct: 190 LYSRCHHDRVFSFACKYSRLSYTTGSEVCNWSSSY--VNSYLGAMSFTCPGNGFV--AGV 245
Query: 549 FSRHAHPEDCR--KYYICLXGVAREYGC 626
S H++ R K+ C + YGC
Sbjct: 246 HSEHSNSAGDRRFKFKCCSRLNVQRYGC 273
>SB_47112| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 970
Score = 29.9 bits (64), Expect = 2.1
Identities = 22/81 (27%), Positives = 32/81 (39%), Gaps = 2/81 (2%)
Frame = +1
Query: 427 LPTTXSPASA-CGLIRFRSAKT-NXXQTDSAARPPVRSPTLARSVVTLIPKIAVNTTSVS 600
LP+T P + F S K Q +A P + PT + +P + T+VS
Sbjct: 261 LPSTKQPTTPQLTTTTFPSTKQPTTTQQTTATLPSTKQPTTTQQTTATLPTPSTKPTTVS 320
Query: 601 XALPASTVAPSEPFSRSETPT 663
P+EP +E PT
Sbjct: 321 PTTRQPPPEPTEPLEPTE-PT 340
Score = 27.9 bits (59), Expect = 8.4
Identities = 23/90 (25%), Positives = 36/90 (40%), Gaps = 2/90 (2%)
Frame = +1
Query: 430 PTTXSPASACGLIRFRSAKTNXXQTDSAARPPVRSPTLARSVVTLIPKIAVNTTSVSXAL 609
P+T P++A + K Q + P R PT + T +P TT+
Sbjct: 173 PSTKQPSTA-----LTTTKQPTTQQTTTNLPSTRQPTTNQQTTTTLPSTKQPTTTQQ--- 224
Query: 610 PASTVAPS--EPFSRSETPTALVTAXTPKT 693
+T PS +P + +T T L + P T
Sbjct: 225 -TTTTIPSTKQPTTTQQTTTTLPSTKQPTT 253
>SB_39072| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1011
Score = 29.9 bits (64), Expect = 2.1
Identities = 25/98 (25%), Positives = 38/98 (38%), Gaps = 1/98 (1%)
Frame = +1
Query: 403 PAIXAAPDLPTTXSPASACGLIRFRSAKTNXXQTDSAARPPVRSPTLARSVVTLIPKI-A 579
P+ + P P+T S S + T SA P+ TL+ P +
Sbjct: 141 PSTPSTPSTPSTPSTPSTPST-PITPGTPSTPSTPSAPGTPITPSTLSTPSTPSTPSTRS 199
Query: 580 VNTTSVSXALPASTVAPSEPFSRSETPTALVTAXTPKT 693
+T + + P++ PS P S TP+ T TP T
Sbjct: 200 TPSTPSTPSTPSTLSMPSTP-SMPNTPSTPSTPSTPST 236
Score = 29.9 bits (64), Expect = 2.1
Identities = 25/98 (25%), Positives = 39/98 (39%), Gaps = 1/98 (1%)
Frame = +1
Query: 403 PAIXAAPDLPTTXSPASACGLIRFRSAKTNXXQTDSAARPPVRSPTLARSVVTLIPKI-A 579
P+ + P+ P+T S S + T SA P+ TL+ P +
Sbjct: 691 PSTPSMPNTPSTPSTPSTPST-PITPGTPSTPSTPSAPGTPITPSTLSTPSTPSTPSTRS 749
Query: 580 VNTTSVSXALPASTVAPSEPFSRSETPTALVTAXTPKT 693
+T + + P++ PS P S TP+ T TP T
Sbjct: 750 TPSTPSTPSTPSTLSMPSTP-SMPNTPSTPSTPSTPST 786
>SB_14296| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1141
Score = 29.9 bits (64), Expect = 2.1
Identities = 31/128 (24%), Positives = 48/128 (37%), Gaps = 5/128 (3%)
Frame = +1
Query: 325 TVRDCTASSLMKXXXXXXXXXXXXKPPAIXAAPDLPTTXSPASACGLIRFRSAKT----- 489
T + T +SL+ P AP+ T A+A + A T
Sbjct: 254 TAPEATTASLVTTAPETTTASLVTTAPEATTAPEATTAPEAATASLVTTAPEATTASLLT 313
Query: 490 NXXQTDSAARPPVRSPTLARSVVTLIPKIAVNTTSVSXALPASTVAPSEPFSRSETPTAL 669
+T +A+ S+VT P+ T S++ P +T A S + ET TAL
Sbjct: 314 TAPETTTASLVTTAPEATTASLVTTAPE--TTTASLATTAPETTTA-SLATTAPETTTAL 370
Query: 670 VTAXTPKT 693
+ P+T
Sbjct: 371 LVTTAPET 378
>SB_11987| Best HMM Match : OTU (HMM E-Value=1.1e-24)
Length = 1142
Score = 29.5 bits (63), Expect = 2.7
Identities = 20/62 (32%), Positives = 31/62 (50%), Gaps = 5/62 (8%)
Frame = +1
Query: 400 PPAIXAAPDLPTTXSPASACGLIRFRSAKTNXXQTDSA---ARP--PVRSPTLARSVVTL 564
P + AP + P+ A R ++AKT QTDS+ ++P PV SPT + +
Sbjct: 474 PVQLEQAPSVEAGQEPSPAEFWSRLKNAKTQSKQTDSSPSTSKPATPVTSPTEGKQSHSQ 533
Query: 565 IP 570
+P
Sbjct: 534 LP 535
>SB_21575| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 696
Score = 29.5 bits (63), Expect = 2.7
Identities = 20/57 (35%), Positives = 27/57 (47%)
Frame = +1
Query: 520 PPVRSPTLARSVVTLIPKIAVNTTSVSXALPASTVAPSEPFSRSETPTALVTAXTPK 690
PP+ S T A VVT K TT P +T P+ P + + PT+ TA P+
Sbjct: 565 PPLTS-TAAEPVVTPTTKGKTTTTGHPTKTPTTTSGPTHPPTTTARPTS--TAPAPR 618
>SB_8084| Best HMM Match : EGF_CA (HMM E-Value=2.8026e-45)
Length = 3094
Score = 29.5 bits (63), Expect = 2.7
Identities = 19/68 (27%), Positives = 28/68 (41%), Gaps = 3/68 (4%)
Frame = +1
Query: 499 QTDSAARPPVRSPTLARSVVTLIPKIAV---NTTSVSXALPASTVAPSEPFSRSETPTAL 669
+T A T A V T++P+ T ++ ++ T A SE ETP A
Sbjct: 2211 ETTVAPETTAALETTAAPVTTMVPETTAAPATTAALETSIVPETTAASETTVAPETPDAP 2270
Query: 670 VTAXTPKT 693
T P+T
Sbjct: 2271 ATTLAPET 2278
Score = 27.9 bits (59), Expect = 8.4
Identities = 30/109 (27%), Positives = 43/109 (39%), Gaps = 11/109 (10%)
Frame = +1
Query: 400 PPAIXAAPDLPTTXSPASACGLIRFRSAKTNXXQTDSAARPPVRSP-TLARSVVTLIPK- 573
PP I AA + TT +P + G +T + A +P T +T+ P+
Sbjct: 1625 PPEITAATE--TTAAPETTVGPETTAPPETTAAPDTTVAGETTAAPDTTMAPEITVAPET 1682
Query: 574 -IAVNTTSV--------SXALPASTVAPSEPFSRSETPTALVTAXTPKT 693
+A TTS S +P +TVAP + T T PKT
Sbjct: 1683 TVAPETTSAPVTTVAPESTLVPETTVAPDTTVAPETTVVPETTMRPPKT 1731
>SB_54954| Best HMM Match : zf-RanBP (HMM E-Value=2.1)
Length = 172
Score = 28.7 bits (61), Expect = 4.8
Identities = 19/63 (30%), Positives = 27/63 (42%)
Frame = +1
Query: 499 QTDSAARPPVRSPTLARSVVTLIPKIAVNTTSVSXALPASTVAPSEPFSRSETPTALVTA 678
+T +A PP +P T P A T+ A PA+T P+ + + PT A
Sbjct: 114 KTPAATTPPTGAPA-----ATTPPTAAPAATTPPTAAPAATTPPTGAPAATTPPTGAPAA 168
Query: 679 XTP 687
TP
Sbjct: 169 TTP 171
>SB_44302| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 67
Score = 28.7 bits (61), Expect = 4.8
Identities = 19/63 (30%), Positives = 27/63 (42%)
Frame = +1
Query: 499 QTDSAARPPVRSPTLARSVVTLIPKIAVNTTSVSXALPASTVAPSEPFSRSETPTALVTA 678
+T +A PP +P T P A T+ A PA+T P+ + + PT A
Sbjct: 4 KTPAATTPPTGAPA-----ATTPPTAAPAATTPPTAAPAATTPPTGAPAATTPPTGAPAA 58
Query: 679 XTP 687
TP
Sbjct: 59 TTP 61
>SB_13694| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 767
Score = 28.7 bits (61), Expect = 4.8
Identities = 13/36 (36%), Positives = 17/36 (47%)
Frame = +3
Query: 366 CDVFWNCWNGXASRYXCSPGLAYDRXSRVCMWADQV 473
C F +C N AS C GL Y+ ++ C W V
Sbjct: 91 CRGFIHCHNYNASYKPCPGGLLYNEKTKQCDWPRNV 126
Score = 28.3 bits (60), Expect = 6.3
Identities = 14/44 (31%), Positives = 21/44 (47%)
Frame = +3
Query: 153 SCDKYWKCDNGVAELKTCGNGLAFDATDSKYLTENCDYLHNVEC 284
+C + C N A K C GL ++ T+ CD+ NV+C
Sbjct: 90 ACRGFIHCHNYNASYKPCPGGLLYNEK-----TKQCDWPRNVDC 128
>SB_26886| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 6489
Score = 28.3 bits (60), Expect = 6.3
Identities = 19/54 (35%), Positives = 24/54 (44%)
Frame = +1
Query: 472 FRSAKTNXXQTDSAARPPVRSPTLARSVVTLIPKIAVNTTSVSXALPASTVAPS 633
F+ N S PPV +PT A T P TT+ LPA+T AP+
Sbjct: 6095 FKGVGNNKGNKTSTTEPPVTTPTTA---PTTTPPTTKQTTT---QLPATTKAPT 6142
>SB_53929| Best HMM Match : Amelogenin (HMM E-Value=3.6)
Length = 156
Score = 28.3 bits (60), Expect = 6.3
Identities = 18/67 (26%), Positives = 27/67 (40%)
Frame = +1
Query: 499 QTDSAARPPVRSPTLARSVVTLIPKIAVNTTSVSXALPASTVAPSEPFSRSETPTALVTA 678
+T +A +RS A + +T V T+ A T AP+ P + + P A VT
Sbjct: 19 KTSAARSSVIRSLMSAEASLTAASAAPVTPTAAPAAPVTPTAAPAAPVTPTAAPAARVTP 78
Query: 679 XTPKTFP 699
P
Sbjct: 79 TAAPAAP 85
>SB_18656| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 3292
Score = 28.3 bits (60), Expect = 6.3
Identities = 23/99 (23%), Positives = 37/99 (37%), Gaps = 2/99 (2%)
Frame = +3
Query: 387 WNGXASRYXCSPGLAYDRXSRVC-MWADQVPECK-NE*XANGFGCPAPGEVSNAGSFSRH 560
W+ + R C PG R + VC + Q C+ + G+ C P + + +R
Sbjct: 1929 WDTFSCR--CRPGYVGKRCTNVCDLKPCQNGNCELSSATPKGYKCKCPPQYTGEYCETRK 1986
Query: 561 AHPEDCRKYYICLXGVAREYGCPIGTVFKIGDXDGTGNC 677
P + + G+ CP+G F TG C
Sbjct: 1987 ETPCQDKFFSASNIGLCGPCNCPVGANFNPVCNKTTGEC 2025
>SB_16587| Best HMM Match : Cytadhesin_P30 (HMM E-Value=0.69)
Length = 404
Score = 28.3 bits (60), Expect = 6.3
Identities = 18/67 (26%), Positives = 27/67 (40%)
Frame = +1
Query: 499 QTDSAARPPVRSPTLARSVVTLIPKIAVNTTSVSXALPASTVAPSEPFSRSETPTALVTA 678
+T +A +RS A + +T V T+ A T AP+ P + + P A VT
Sbjct: 176 KTSAARSSVIRSLMSAEASLTAASAAPVTPTAAPAAPVTPTAAPAAPVTPTAAPAARVTP 235
Query: 679 XTPKTFP 699
P
Sbjct: 236 TAAPAAP 242
>SB_10557| Best HMM Match : GCC2_GCC3 (HMM E-Value=7.2e-15)
Length = 1215
Score = 28.3 bits (60), Expect = 6.3
Identities = 10/28 (35%), Positives = 13/28 (46%)
Frame = +3
Query: 594 CLXGVAREYGCPIGTVFKIGDXDGTGNC 677
C G A GCP GT + + G+C
Sbjct: 1169 CPLGTAEPIGCPNGTFSNVSQLESAGDC 1196
>SB_3108| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 631
Score = 28.3 bits (60), Expect = 6.3
Identities = 20/82 (24%), Positives = 33/82 (40%), Gaps = 1/82 (1%)
Frame = +3
Query: 153 SCDKYWKCDNGVAELK-TCGNGLAFDATDSKYLTENCDYLHNVECGERTQLEPPISTPHC 329
+CDK KCDN + TC G + + + T+ C + C + + I + HC
Sbjct: 534 TCDKNAKCDNTIGSYHCTCNPGFSGNGRECTD-TDEC-VTGDHTCDKNARCGNTIGSYHC 591
Query: 330 SRLYGIFPDENKCDVFWNCWNG 395
+ G + +C C G
Sbjct: 592 TCNPGFSGNGRECTDIDECVTG 613
>SB_47732| Best HMM Match : Pkinase (HMM E-Value=0.0016)
Length = 318
Score = 27.9 bits (59), Expect = 8.4
Identities = 14/44 (31%), Positives = 23/44 (52%)
Frame = -2
Query: 333 SNSGEWRLGARAVSSLRTQRCEGSRSSRSSIWNLWRRKRDRYRR 202
S +GEWRL R V + + + +S + WN +R R R ++
Sbjct: 146 SLNGEWRLMRRQVRAKQRLYNKAKKSGNPTHWNEFRIARKRLQK 189
>SB_21308| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2641
Score = 27.9 bits (59), Expect = 8.4
Identities = 10/32 (31%), Positives = 15/32 (46%)
Frame = +3
Query: 111 FKCPDDFGFYPHHISCDKYWKCDNGVAELKTC 206
+ CP GF+P S +Y C E+ +C
Sbjct: 2177 YDCPTSDGFFPDPASNGRYIHCSGNSPEIMSC 2208
>SB_12832| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1169
Score = 27.9 bits (59), Expect = 8.4
Identities = 10/32 (31%), Positives = 15/32 (46%)
Frame = +3
Query: 543 GSFSRHAHPEDCRKYYICLXGVAREYGCPIGT 638
G + + C K + C G+ E CP+GT
Sbjct: 868 GGLTNVSEATSCSKAHYCPEGIEAEVPCPVGT 899
>SB_47132| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 225
Score = 27.9 bits (59), Expect = 8.4
Identities = 23/111 (20%), Positives = 38/111 (34%), Gaps = 1/111 (0%)
Frame = +3
Query: 129 FGFYPHHISCDKYWKCDNGVAELKTCGNGLAFDATDSKYLTENCDYLHNVECGERTQLEP 308
FG Y C + C + + C +G + T C L +CG
Sbjct: 115 FGNYADTARCAGFISCASNGMTRQACPSGTQWQTTGPGVGICTCPSLS--DCGSA----- 167
Query: 309 PISTPHC-SRLYGIFPDENKCDVFWNCWNGXASRYXCSPGLAYDRXSRVCM 458
C + G +PD ++CD + +C +G C G + C+
Sbjct: 168 --DGNFCRGKADGDYPDTSRCDGYVSCVSGYIYYMPCPAGTQWKNAEDACV 216
>SB_19246| Best HMM Match : CPL (HMM E-Value=5.99994e-41)
Length = 506
Score = 27.9 bits (59), Expect = 8.4
Identities = 13/45 (28%), Positives = 24/45 (53%), Gaps = 1/45 (2%)
Frame = -2
Query: 333 SNSGEWRLGA-RAVSSLRTQRCEGSRSSRSSIWNLWRRKRDRYRR 202
SNS + + +A S+ T+ EG + IW + +++R YR+
Sbjct: 68 SNSKDVKFSTPKASSNKDTKPSEGDTEDKQDIWKMKKKERKEYRK 112
>SB_16814| Best HMM Match : HNF-1A_C (HMM E-Value=2.9)
Length = 183
Score = 27.9 bits (59), Expect = 8.4
Identities = 16/45 (35%), Positives = 21/45 (46%)
Frame = +1
Query: 562 LIPKIAVNTTSVSXALPASTVAPSEPFSRSETPTALVTAXTPKTF 696
+IP + TT S + SE S S TPTAL T + +F
Sbjct: 108 VIPSNGITTTFAQVTRALSLPSTSELKSSSNTPTALSTVTSMSSF 152
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,586,537
Number of Sequences: 59808
Number of extensions: 440860
Number of successful extensions: 1453
Number of sequences better than 10.0: 47
Number of HSP's better than 10.0 without gapping: 1232
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1435
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 1829596184
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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