BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= brP-0601 (650 letters) Database: fruitfly 53,049 sequences; 24,988,368 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value AL138972-3|CAB72286.1| 2447|Drosophila melanogaster EG:BACR25B3.... 30 3.1 AJ487018-1|CAD31650.1| 4223|Drosophila melanogaster perlecan pro... 30 3.1 AE014298-409|AAN09080.1| 3215|Drosophila melanogaster CG33950-PB... 30 3.1 AE014298-408|AAN09079.1| 4223|Drosophila melanogaster CG33950-PD... 30 3.1 AE014298-407|AAF45786.3| 4179|Drosophila melanogaster CG33950-PA... 30 3.1 AE014298-406|AAN09078.1| 4228|Drosophila melanogaster CG33950-PE... 30 3.1 AE014298-405|AAN09077.1| 4117|Drosophila melanogaster CG33950-PC... 30 3.1 AE014298-404|AAF45787.2| 4629|Drosophila melanogaster CG33950-PF... 30 3.1 AY113646-1|AAM29651.1| 576|Drosophila melanogaster RH74685p pro... 29 5.5 AF255672-1|AAG01799.1| 209|Drosophila melanogaster Stretchin-ML... 29 5.5 AF255667-1|AAG01794.1| 536|Drosophila melanogaster Stretchin-ML... 29 5.5 AE013599-2143|AAF58090.2| 1506|Drosophila melanogaster CG18255-P... 29 5.5 AE013599-2142|AAM70937.1| 4463|Drosophila melanogaster CG18255-P... 29 5.5 AE013599-2141|AAM70936.1| 9270|Drosophila melanogaster CG18255-P... 29 5.5 >AL138972-3|CAB72286.1| 2447|Drosophila melanogaster EG:BACR25B3.1 protein. Length = 2447 Score = 29.9 bits (64), Expect = 3.1 Identities = 16/56 (28%), Positives = 29/56 (51%) Frame = -3 Query: 540 MQSIDLRPMTTRGRVLHKYPVVNAGCSSTGLPLLTVGVGPRIHWEVIPSECEGRRH 373 M + +RP +L +Y V+ C +TG P T+ R++W +P +CE + + Sbjct: 1338 MAPLPIRPPPQSVSLL-EYEVLELTCVATGTPTPTIVW--RLNWGHVPDKCESKSY 1390 >AJ487018-1|CAD31650.1| 4223|Drosophila melanogaster perlecan protein. Length = 4223 Score = 29.9 bits (64), Expect = 3.1 Identities = 16/56 (28%), Positives = 29/56 (51%) Frame = -3 Query: 540 MQSIDLRPMTTRGRVLHKYPVVNAGCSSTGLPLLTVGVGPRIHWEVIPSECEGRRH 373 M + +RP +L +Y V+ C +TG P T+ R++W +P +CE + + Sbjct: 1329 MAPLPIRPPPQSVSLL-EYEVLELTCVATGTPTPTIVW--RLNWGHVPDKCESKSY 1381 >AE014298-409|AAN09080.1| 3215|Drosophila melanogaster CG33950-PB, isoform B protein. Length = 3215 Score = 29.9 bits (64), Expect = 3.1 Identities = 16/56 (28%), Positives = 29/56 (51%) Frame = -3 Query: 540 MQSIDLRPMTTRGRVLHKYPVVNAGCSSTGLPLLTVGVGPRIHWEVIPSECEGRRH 373 M + +RP +L +Y V+ C +TG P T+ R++W +P +CE + + Sbjct: 1223 MAPLPIRPPPQSVSLL-EYEVLELTCVATGTPTPTIVW--RLNWGHVPDKCESKSY 1275 >AE014298-408|AAN09079.1| 4223|Drosophila melanogaster CG33950-PD, isoform D protein. Length = 4223 Score = 29.9 bits (64), Expect = 3.1 Identities = 16/56 (28%), Positives = 29/56 (51%) Frame = -3 Query: 540 MQSIDLRPMTTRGRVLHKYPVVNAGCSSTGLPLLTVGVGPRIHWEVIPSECEGRRH 373 M + +RP +L +Y V+ C +TG P T+ R++W +P +CE + + Sbjct: 1329 MAPLPIRPPPQSVSLL-EYEVLELTCVATGTPTPTIVW--RLNWGHVPDKCESKSY 1381 >AE014298-407|AAF45786.3| 4179|Drosophila melanogaster CG33950-PA, isoform A protein. Length = 4179 Score = 29.9 bits (64), Expect = 3.1 Identities = 16/56 (28%), Positives = 29/56 (51%) Frame = -3 Query: 540 MQSIDLRPMTTRGRVLHKYPVVNAGCSSTGLPLLTVGVGPRIHWEVIPSECEGRRH 373 M + +RP +L +Y V+ C +TG P T+ R++W +P +CE + + Sbjct: 1223 MAPLPIRPPPQSVSLL-EYEVLELTCVATGTPTPTIVW--RLNWGHVPDKCESKSY 1275 >AE014298-406|AAN09078.1| 4228|Drosophila melanogaster CG33950-PE, isoform E protein. Length = 4228 Score = 29.9 bits (64), Expect = 3.1 Identities = 16/56 (28%), Positives = 29/56 (51%) Frame = -3 Query: 540 MQSIDLRPMTTRGRVLHKYPVVNAGCSSTGLPLLTVGVGPRIHWEVIPSECEGRRH 373 M + +RP +L +Y V+ C +TG P T+ R++W +P +CE + + Sbjct: 1223 MAPLPIRPPPQSVSLL-EYEVLELTCVATGTPTPTIVW--RLNWGHVPDKCESKSY 1275 >AE014298-405|AAN09077.1| 4117|Drosophila melanogaster CG33950-PC, isoform C protein. Length = 4117 Score = 29.9 bits (64), Expect = 3.1 Identities = 16/56 (28%), Positives = 29/56 (51%) Frame = -3 Query: 540 MQSIDLRPMTTRGRVLHKYPVVNAGCSSTGLPLLTVGVGPRIHWEVIPSECEGRRH 373 M + +RP +L +Y V+ C +TG P T+ R++W +P +CE + + Sbjct: 1223 MAPLPIRPPPQSVSLL-EYEVLELTCVATGTPTPTIVW--RLNWGHVPDKCESKSY 1275 >AE014298-404|AAF45787.2| 4629|Drosophila melanogaster CG33950-PF, isoform F protein. Length = 4629 Score = 29.9 bits (64), Expect = 3.1 Identities = 16/56 (28%), Positives = 29/56 (51%) Frame = -3 Query: 540 MQSIDLRPMTTRGRVLHKYPVVNAGCSSTGLPLLTVGVGPRIHWEVIPSECEGRRH 373 M + +RP +L +Y V+ C +TG P T+ R++W +P +CE + + Sbjct: 1735 MAPLPIRPPPQSVSLL-EYEVLELTCVATGTPTPTIVW--RLNWGHVPDKCESKSY 1787 >AY113646-1|AAM29651.1| 576|Drosophila melanogaster RH74685p protein. Length = 576 Score = 29.1 bits (62), Expect = 5.5 Identities = 16/44 (36%), Positives = 27/44 (61%) Frame = +1 Query: 226 ISKNFIGKSIKRSQTVLDSPPRVRRLLLFRQGADQSGDVSASST 357 ++KN +G+S+ + ++D P + +L RQ A SG +SA ST Sbjct: 88 VAKNSVGRSLSSACIIVDVPEE-KENMLSRQLARPSGLLSAHST 130 >AF255672-1|AAG01799.1| 209|Drosophila melanogaster Stretchin-MLCK protein. Length = 209 Score = 29.1 bits (62), Expect = 5.5 Identities = 16/44 (36%), Positives = 27/44 (61%) Frame = +1 Query: 226 ISKNFIGKSIKRSQTVLDSPPRVRRLLLFRQGADQSGDVSASST 357 ++KN +G+S+ + ++D P + +L RQ A SG +SA ST Sbjct: 103 VAKNSVGRSLSSACIIVDVPEE-KENMLSRQLARPSGLLSAHST 145 >AF255667-1|AAG01794.1| 536|Drosophila melanogaster Stretchin-MLCK protein. Length = 536 Score = 29.1 bits (62), Expect = 5.5 Identities = 16/44 (36%), Positives = 27/44 (61%) Frame = +1 Query: 226 ISKNFIGKSIKRSQTVLDSPPRVRRLLLFRQGADQSGDVSASST 357 ++KN +G+S+ + ++D P + +L RQ A SG +SA ST Sbjct: 20 VAKNSVGRSLSSACIIVDVPEE-KENMLSRQLARPSGLLSAHST 62 >AE013599-2143|AAF58090.2| 1506|Drosophila melanogaster CG18255-PF, isoform F protein. Length = 1506 Score = 29.1 bits (62), Expect = 5.5 Identities = 16/44 (36%), Positives = 27/44 (61%) Frame = +1 Query: 226 ISKNFIGKSIKRSQTVLDSPPRVRRLLLFRQGADQSGDVSASST 357 ++KN +G+S+ + ++D P + +L RQ A SG +SA ST Sbjct: 103 VAKNSVGRSLSSACIIVDVPEE-KENMLSRQLARPSGLLSAHST 145 >AE013599-2142|AAM70937.1| 4463|Drosophila melanogaster CG18255-PC, isoform C protein. Length = 4463 Score = 29.1 bits (62), Expect = 5.5 Identities = 16/44 (36%), Positives = 27/44 (61%) Frame = +1 Query: 226 ISKNFIGKSIKRSQTVLDSPPRVRRLLLFRQGADQSGDVSASST 357 ++KN +G+S+ + ++D P + +L RQ A SG +SA ST Sbjct: 3060 VAKNSVGRSLSSACIIVDVPEE-KENMLSRQLARPSGLLSAHST 3102 >AE013599-2141|AAM70936.1| 9270|Drosophila melanogaster CG18255-PA, isoform A protein. Length = 9270 Score = 29.1 bits (62), Expect = 5.5 Identities = 16/44 (36%), Positives = 27/44 (61%) Frame = +1 Query: 226 ISKNFIGKSIKRSQTVLDSPPRVRRLLLFRQGADQSGDVSASST 357 ++KN +G+S+ + ++D P + +L RQ A SG +SA ST Sbjct: 7867 VAKNSVGRSLSSACIIVDVPEE-KENMLSRQLARPSGLLSAHST 7909 Database: fruitfly Posted date: Oct 23, 2007 1:17 PM Number of letters in database: 24,988,368 Number of sequences in database: 53,049 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 31,641,368 Number of Sequences: 53049 Number of extensions: 703035 Number of successful extensions: 1707 Number of sequences better than 10.0: 14 Number of HSP's better than 10.0 without gapping: 1616 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1707 length of database: 24,988,368 effective HSP length: 82 effective length of database: 20,638,350 effective search space used: 2765538900 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
- SilkBase 1999-2023 -