Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brP-0601
(650 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AL138972-3|CAB72286.1| 2447|Drosophila melanogaster EG:BACR25B3.... 30 3.1
AJ487018-1|CAD31650.1| 4223|Drosophila melanogaster perlecan pro... 30 3.1
AE014298-409|AAN09080.1| 3215|Drosophila melanogaster CG33950-PB... 30 3.1
AE014298-408|AAN09079.1| 4223|Drosophila melanogaster CG33950-PD... 30 3.1
AE014298-407|AAF45786.3| 4179|Drosophila melanogaster CG33950-PA... 30 3.1
AE014298-406|AAN09078.1| 4228|Drosophila melanogaster CG33950-PE... 30 3.1
AE014298-405|AAN09077.1| 4117|Drosophila melanogaster CG33950-PC... 30 3.1
AE014298-404|AAF45787.2| 4629|Drosophila melanogaster CG33950-PF... 30 3.1
AY113646-1|AAM29651.1| 576|Drosophila melanogaster RH74685p pro... 29 5.5
AF255672-1|AAG01799.1| 209|Drosophila melanogaster Stretchin-ML... 29 5.5
AF255667-1|AAG01794.1| 536|Drosophila melanogaster Stretchin-ML... 29 5.5
AE013599-2143|AAF58090.2| 1506|Drosophila melanogaster CG18255-P... 29 5.5
AE013599-2142|AAM70937.1| 4463|Drosophila melanogaster CG18255-P... 29 5.5
AE013599-2141|AAM70936.1| 9270|Drosophila melanogaster CG18255-P... 29 5.5
>AL138972-3|CAB72286.1| 2447|Drosophila melanogaster EG:BACR25B3.1
protein.
Length = 2447
Score = 29.9 bits (64), Expect = 3.1
Identities = 16/56 (28%), Positives = 29/56 (51%)
Frame = -3
Query: 540 MQSIDLRPMTTRGRVLHKYPVVNAGCSSTGLPLLTVGVGPRIHWEVIPSECEGRRH 373
M + +RP +L +Y V+ C +TG P T+ R++W +P +CE + +
Sbjct: 1338 MAPLPIRPPPQSVSLL-EYEVLELTCVATGTPTPTIVW--RLNWGHVPDKCESKSY 1390
>AJ487018-1|CAD31650.1| 4223|Drosophila melanogaster perlecan protein.
Length = 4223
Score = 29.9 bits (64), Expect = 3.1
Identities = 16/56 (28%), Positives = 29/56 (51%)
Frame = -3
Query: 540 MQSIDLRPMTTRGRVLHKYPVVNAGCSSTGLPLLTVGVGPRIHWEVIPSECEGRRH 373
M + +RP +L +Y V+ C +TG P T+ R++W +P +CE + +
Sbjct: 1329 MAPLPIRPPPQSVSLL-EYEVLELTCVATGTPTPTIVW--RLNWGHVPDKCESKSY 1381
>AE014298-409|AAN09080.1| 3215|Drosophila melanogaster CG33950-PB,
isoform B protein.
Length = 3215
Score = 29.9 bits (64), Expect = 3.1
Identities = 16/56 (28%), Positives = 29/56 (51%)
Frame = -3
Query: 540 MQSIDLRPMTTRGRVLHKYPVVNAGCSSTGLPLLTVGVGPRIHWEVIPSECEGRRH 373
M + +RP +L +Y V+ C +TG P T+ R++W +P +CE + +
Sbjct: 1223 MAPLPIRPPPQSVSLL-EYEVLELTCVATGTPTPTIVW--RLNWGHVPDKCESKSY 1275
>AE014298-408|AAN09079.1| 4223|Drosophila melanogaster CG33950-PD,
isoform D protein.
Length = 4223
Score = 29.9 bits (64), Expect = 3.1
Identities = 16/56 (28%), Positives = 29/56 (51%)
Frame = -3
Query: 540 MQSIDLRPMTTRGRVLHKYPVVNAGCSSTGLPLLTVGVGPRIHWEVIPSECEGRRH 373
M + +RP +L +Y V+ C +TG P T+ R++W +P +CE + +
Sbjct: 1329 MAPLPIRPPPQSVSLL-EYEVLELTCVATGTPTPTIVW--RLNWGHVPDKCESKSY 1381
>AE014298-407|AAF45786.3| 4179|Drosophila melanogaster CG33950-PA,
isoform A protein.
Length = 4179
Score = 29.9 bits (64), Expect = 3.1
Identities = 16/56 (28%), Positives = 29/56 (51%)
Frame = -3
Query: 540 MQSIDLRPMTTRGRVLHKYPVVNAGCSSTGLPLLTVGVGPRIHWEVIPSECEGRRH 373
M + +RP +L +Y V+ C +TG P T+ R++W +P +CE + +
Sbjct: 1223 MAPLPIRPPPQSVSLL-EYEVLELTCVATGTPTPTIVW--RLNWGHVPDKCESKSY 1275
>AE014298-406|AAN09078.1| 4228|Drosophila melanogaster CG33950-PE,
isoform E protein.
Length = 4228
Score = 29.9 bits (64), Expect = 3.1
Identities = 16/56 (28%), Positives = 29/56 (51%)
Frame = -3
Query: 540 MQSIDLRPMTTRGRVLHKYPVVNAGCSSTGLPLLTVGVGPRIHWEVIPSECEGRRH 373
M + +RP +L +Y V+ C +TG P T+ R++W +P +CE + +
Sbjct: 1223 MAPLPIRPPPQSVSLL-EYEVLELTCVATGTPTPTIVW--RLNWGHVPDKCESKSY 1275
>AE014298-405|AAN09077.1| 4117|Drosophila melanogaster CG33950-PC,
isoform C protein.
Length = 4117
Score = 29.9 bits (64), Expect = 3.1
Identities = 16/56 (28%), Positives = 29/56 (51%)
Frame = -3
Query: 540 MQSIDLRPMTTRGRVLHKYPVVNAGCSSTGLPLLTVGVGPRIHWEVIPSECEGRRH 373
M + +RP +L +Y V+ C +TG P T+ R++W +P +CE + +
Sbjct: 1223 MAPLPIRPPPQSVSLL-EYEVLELTCVATGTPTPTIVW--RLNWGHVPDKCESKSY 1275
>AE014298-404|AAF45787.2| 4629|Drosophila melanogaster CG33950-PF,
isoform F protein.
Length = 4629
Score = 29.9 bits (64), Expect = 3.1
Identities = 16/56 (28%), Positives = 29/56 (51%)
Frame = -3
Query: 540 MQSIDLRPMTTRGRVLHKYPVVNAGCSSTGLPLLTVGVGPRIHWEVIPSECEGRRH 373
M + +RP +L +Y V+ C +TG P T+ R++W +P +CE + +
Sbjct: 1735 MAPLPIRPPPQSVSLL-EYEVLELTCVATGTPTPTIVW--RLNWGHVPDKCESKSY 1787
>AY113646-1|AAM29651.1| 576|Drosophila melanogaster RH74685p
protein.
Length = 576
Score = 29.1 bits (62), Expect = 5.5
Identities = 16/44 (36%), Positives = 27/44 (61%)
Frame = +1
Query: 226 ISKNFIGKSIKRSQTVLDSPPRVRRLLLFRQGADQSGDVSASST 357
++KN +G+S+ + ++D P + +L RQ A SG +SA ST
Sbjct: 88 VAKNSVGRSLSSACIIVDVPEE-KENMLSRQLARPSGLLSAHST 130
>AF255672-1|AAG01799.1| 209|Drosophila melanogaster Stretchin-MLCK
protein.
Length = 209
Score = 29.1 bits (62), Expect = 5.5
Identities = 16/44 (36%), Positives = 27/44 (61%)
Frame = +1
Query: 226 ISKNFIGKSIKRSQTVLDSPPRVRRLLLFRQGADQSGDVSASST 357
++KN +G+S+ + ++D P + +L RQ A SG +SA ST
Sbjct: 103 VAKNSVGRSLSSACIIVDVPEE-KENMLSRQLARPSGLLSAHST 145
>AF255667-1|AAG01794.1| 536|Drosophila melanogaster Stretchin-MLCK
protein.
Length = 536
Score = 29.1 bits (62), Expect = 5.5
Identities = 16/44 (36%), Positives = 27/44 (61%)
Frame = +1
Query: 226 ISKNFIGKSIKRSQTVLDSPPRVRRLLLFRQGADQSGDVSASST 357
++KN +G+S+ + ++D P + +L RQ A SG +SA ST
Sbjct: 20 VAKNSVGRSLSSACIIVDVPEE-KENMLSRQLARPSGLLSAHST 62
>AE013599-2143|AAF58090.2| 1506|Drosophila melanogaster CG18255-PF,
isoform F protein.
Length = 1506
Score = 29.1 bits (62), Expect = 5.5
Identities = 16/44 (36%), Positives = 27/44 (61%)
Frame = +1
Query: 226 ISKNFIGKSIKRSQTVLDSPPRVRRLLLFRQGADQSGDVSASST 357
++KN +G+S+ + ++D P + +L RQ A SG +SA ST
Sbjct: 103 VAKNSVGRSLSSACIIVDVPEE-KENMLSRQLARPSGLLSAHST 145
>AE013599-2142|AAM70937.1| 4463|Drosophila melanogaster CG18255-PC,
isoform C protein.
Length = 4463
Score = 29.1 bits (62), Expect = 5.5
Identities = 16/44 (36%), Positives = 27/44 (61%)
Frame = +1
Query: 226 ISKNFIGKSIKRSQTVLDSPPRVRRLLLFRQGADQSGDVSASST 357
++KN +G+S+ + ++D P + +L RQ A SG +SA ST
Sbjct: 3060 VAKNSVGRSLSSACIIVDVPEE-KENMLSRQLARPSGLLSAHST 3102
>AE013599-2141|AAM70936.1| 9270|Drosophila melanogaster CG18255-PA,
isoform A protein.
Length = 9270
Score = 29.1 bits (62), Expect = 5.5
Identities = 16/44 (36%), Positives = 27/44 (61%)
Frame = +1
Query: 226 ISKNFIGKSIKRSQTVLDSPPRVRRLLLFRQGADQSGDVSASST 357
++KN +G+S+ + ++D P + +L RQ A SG +SA ST
Sbjct: 7867 VAKNSVGRSLSSACIIVDVPEE-KENMLSRQLARPSGLLSAHST 7909
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 31,641,368
Number of Sequences: 53049
Number of extensions: 703035
Number of successful extensions: 1707
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 1616
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1707
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2765538900
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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