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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brP-0601
         (650 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AL138972-3|CAB72286.1| 2447|Drosophila melanogaster EG:BACR25B3....    30   3.1  
AJ487018-1|CAD31650.1| 4223|Drosophila melanogaster perlecan pro...    30   3.1  
AE014298-409|AAN09080.1| 3215|Drosophila melanogaster CG33950-PB...    30   3.1  
AE014298-408|AAN09079.1| 4223|Drosophila melanogaster CG33950-PD...    30   3.1  
AE014298-407|AAF45786.3| 4179|Drosophila melanogaster CG33950-PA...    30   3.1  
AE014298-406|AAN09078.1| 4228|Drosophila melanogaster CG33950-PE...    30   3.1  
AE014298-405|AAN09077.1| 4117|Drosophila melanogaster CG33950-PC...    30   3.1  
AE014298-404|AAF45787.2| 4629|Drosophila melanogaster CG33950-PF...    30   3.1  
AY113646-1|AAM29651.1|  576|Drosophila melanogaster RH74685p pro...    29   5.5  
AF255672-1|AAG01799.1|  209|Drosophila melanogaster Stretchin-ML...    29   5.5  
AF255667-1|AAG01794.1|  536|Drosophila melanogaster Stretchin-ML...    29   5.5  
AE013599-2143|AAF58090.2| 1506|Drosophila melanogaster CG18255-P...    29   5.5  
AE013599-2142|AAM70937.1| 4463|Drosophila melanogaster CG18255-P...    29   5.5  
AE013599-2141|AAM70936.1| 9270|Drosophila melanogaster CG18255-P...    29   5.5  

>AL138972-3|CAB72286.1| 2447|Drosophila melanogaster EG:BACR25B3.1
            protein.
          Length = 2447

 Score = 29.9 bits (64), Expect = 3.1
 Identities = 16/56 (28%), Positives = 29/56 (51%)
 Frame = -3

Query: 540  MQSIDLRPMTTRGRVLHKYPVVNAGCSSTGLPLLTVGVGPRIHWEVIPSECEGRRH 373
            M  + +RP      +L +Y V+   C +TG P  T+    R++W  +P +CE + +
Sbjct: 1338 MAPLPIRPPPQSVSLL-EYEVLELTCVATGTPTPTIVW--RLNWGHVPDKCESKSY 1390


>AJ487018-1|CAD31650.1| 4223|Drosophila melanogaster perlecan protein.
          Length = 4223

 Score = 29.9 bits (64), Expect = 3.1
 Identities = 16/56 (28%), Positives = 29/56 (51%)
 Frame = -3

Query: 540  MQSIDLRPMTTRGRVLHKYPVVNAGCSSTGLPLLTVGVGPRIHWEVIPSECEGRRH 373
            M  + +RP      +L +Y V+   C +TG P  T+    R++W  +P +CE + +
Sbjct: 1329 MAPLPIRPPPQSVSLL-EYEVLELTCVATGTPTPTIVW--RLNWGHVPDKCESKSY 1381


>AE014298-409|AAN09080.1| 3215|Drosophila melanogaster CG33950-PB,
            isoform B protein.
          Length = 3215

 Score = 29.9 bits (64), Expect = 3.1
 Identities = 16/56 (28%), Positives = 29/56 (51%)
 Frame = -3

Query: 540  MQSIDLRPMTTRGRVLHKYPVVNAGCSSTGLPLLTVGVGPRIHWEVIPSECEGRRH 373
            M  + +RP      +L +Y V+   C +TG P  T+    R++W  +P +CE + +
Sbjct: 1223 MAPLPIRPPPQSVSLL-EYEVLELTCVATGTPTPTIVW--RLNWGHVPDKCESKSY 1275


>AE014298-408|AAN09079.1| 4223|Drosophila melanogaster CG33950-PD,
            isoform D protein.
          Length = 4223

 Score = 29.9 bits (64), Expect = 3.1
 Identities = 16/56 (28%), Positives = 29/56 (51%)
 Frame = -3

Query: 540  MQSIDLRPMTTRGRVLHKYPVVNAGCSSTGLPLLTVGVGPRIHWEVIPSECEGRRH 373
            M  + +RP      +L +Y V+   C +TG P  T+    R++W  +P +CE + +
Sbjct: 1329 MAPLPIRPPPQSVSLL-EYEVLELTCVATGTPTPTIVW--RLNWGHVPDKCESKSY 1381


>AE014298-407|AAF45786.3| 4179|Drosophila melanogaster CG33950-PA,
            isoform A protein.
          Length = 4179

 Score = 29.9 bits (64), Expect = 3.1
 Identities = 16/56 (28%), Positives = 29/56 (51%)
 Frame = -3

Query: 540  MQSIDLRPMTTRGRVLHKYPVVNAGCSSTGLPLLTVGVGPRIHWEVIPSECEGRRH 373
            M  + +RP      +L +Y V+   C +TG P  T+    R++W  +P +CE + +
Sbjct: 1223 MAPLPIRPPPQSVSLL-EYEVLELTCVATGTPTPTIVW--RLNWGHVPDKCESKSY 1275


>AE014298-406|AAN09078.1| 4228|Drosophila melanogaster CG33950-PE,
            isoform E protein.
          Length = 4228

 Score = 29.9 bits (64), Expect = 3.1
 Identities = 16/56 (28%), Positives = 29/56 (51%)
 Frame = -3

Query: 540  MQSIDLRPMTTRGRVLHKYPVVNAGCSSTGLPLLTVGVGPRIHWEVIPSECEGRRH 373
            M  + +RP      +L +Y V+   C +TG P  T+    R++W  +P +CE + +
Sbjct: 1223 MAPLPIRPPPQSVSLL-EYEVLELTCVATGTPTPTIVW--RLNWGHVPDKCESKSY 1275


>AE014298-405|AAN09077.1| 4117|Drosophila melanogaster CG33950-PC,
            isoform C protein.
          Length = 4117

 Score = 29.9 bits (64), Expect = 3.1
 Identities = 16/56 (28%), Positives = 29/56 (51%)
 Frame = -3

Query: 540  MQSIDLRPMTTRGRVLHKYPVVNAGCSSTGLPLLTVGVGPRIHWEVIPSECEGRRH 373
            M  + +RP      +L +Y V+   C +TG P  T+    R++W  +P +CE + +
Sbjct: 1223 MAPLPIRPPPQSVSLL-EYEVLELTCVATGTPTPTIVW--RLNWGHVPDKCESKSY 1275


>AE014298-404|AAF45787.2| 4629|Drosophila melanogaster CG33950-PF,
            isoform F protein.
          Length = 4629

 Score = 29.9 bits (64), Expect = 3.1
 Identities = 16/56 (28%), Positives = 29/56 (51%)
 Frame = -3

Query: 540  MQSIDLRPMTTRGRVLHKYPVVNAGCSSTGLPLLTVGVGPRIHWEVIPSECEGRRH 373
            M  + +RP      +L +Y V+   C +TG P  T+    R++W  +P +CE + +
Sbjct: 1735 MAPLPIRPPPQSVSLL-EYEVLELTCVATGTPTPTIVW--RLNWGHVPDKCESKSY 1787


>AY113646-1|AAM29651.1|  576|Drosophila melanogaster RH74685p
           protein.
          Length = 576

 Score = 29.1 bits (62), Expect = 5.5
 Identities = 16/44 (36%), Positives = 27/44 (61%)
 Frame = +1

Query: 226 ISKNFIGKSIKRSQTVLDSPPRVRRLLLFRQGADQSGDVSASST 357
           ++KN +G+S+  +  ++D P   +  +L RQ A  SG +SA ST
Sbjct: 88  VAKNSVGRSLSSACIIVDVPEE-KENMLSRQLARPSGLLSAHST 130


>AF255672-1|AAG01799.1|  209|Drosophila melanogaster Stretchin-MLCK
           protein.
          Length = 209

 Score = 29.1 bits (62), Expect = 5.5
 Identities = 16/44 (36%), Positives = 27/44 (61%)
 Frame = +1

Query: 226 ISKNFIGKSIKRSQTVLDSPPRVRRLLLFRQGADQSGDVSASST 357
           ++KN +G+S+  +  ++D P   +  +L RQ A  SG +SA ST
Sbjct: 103 VAKNSVGRSLSSACIIVDVPEE-KENMLSRQLARPSGLLSAHST 145


>AF255667-1|AAG01794.1|  536|Drosophila melanogaster Stretchin-MLCK
           protein.
          Length = 536

 Score = 29.1 bits (62), Expect = 5.5
 Identities = 16/44 (36%), Positives = 27/44 (61%)
 Frame = +1

Query: 226 ISKNFIGKSIKRSQTVLDSPPRVRRLLLFRQGADQSGDVSASST 357
           ++KN +G+S+  +  ++D P   +  +L RQ A  SG +SA ST
Sbjct: 20  VAKNSVGRSLSSACIIVDVPEE-KENMLSRQLARPSGLLSAHST 62


>AE013599-2143|AAF58090.2| 1506|Drosophila melanogaster CG18255-PF,
           isoform F protein.
          Length = 1506

 Score = 29.1 bits (62), Expect = 5.5
 Identities = 16/44 (36%), Positives = 27/44 (61%)
 Frame = +1

Query: 226 ISKNFIGKSIKRSQTVLDSPPRVRRLLLFRQGADQSGDVSASST 357
           ++KN +G+S+  +  ++D P   +  +L RQ A  SG +SA ST
Sbjct: 103 VAKNSVGRSLSSACIIVDVPEE-KENMLSRQLARPSGLLSAHST 145


>AE013599-2142|AAM70937.1| 4463|Drosophila melanogaster CG18255-PC,
            isoform C protein.
          Length = 4463

 Score = 29.1 bits (62), Expect = 5.5
 Identities = 16/44 (36%), Positives = 27/44 (61%)
 Frame = +1

Query: 226  ISKNFIGKSIKRSQTVLDSPPRVRRLLLFRQGADQSGDVSASST 357
            ++KN +G+S+  +  ++D P   +  +L RQ A  SG +SA ST
Sbjct: 3060 VAKNSVGRSLSSACIIVDVPEE-KENMLSRQLARPSGLLSAHST 3102


>AE013599-2141|AAM70936.1| 9270|Drosophila melanogaster CG18255-PA,
            isoform A protein.
          Length = 9270

 Score = 29.1 bits (62), Expect = 5.5
 Identities = 16/44 (36%), Positives = 27/44 (61%)
 Frame = +1

Query: 226  ISKNFIGKSIKRSQTVLDSPPRVRRLLLFRQGADQSGDVSASST 357
            ++KN +G+S+  +  ++D P   +  +L RQ A  SG +SA ST
Sbjct: 7867 VAKNSVGRSLSSACIIVDVPEE-KENMLSRQLARPSGLLSAHST 7909


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 31,641,368
Number of Sequences: 53049
Number of extensions: 703035
Number of successful extensions: 1707
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 1616
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1707
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2765538900
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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