BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= brP-0599 (749 letters) Database: uniref50 1,657,284 sequences; 575,637,011 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value UniRef50_A0CZC8 Cluster: Chromosome undetermined scaffold_32, wh... 36 1.4 UniRef50_Q9G802 Cluster: NADH-ubiquinone oxidoreductase chain 4L... 33 7.5 >UniRef50_A0CZC8 Cluster: Chromosome undetermined scaffold_32, whole genome shotgun sequence; n=3; Oligohymenophorea|Rep: Chromosome undetermined scaffold_32, whole genome shotgun sequence - Paramecium tetraurelia Length = 289 Score = 35.5 bits (78), Expect = 1.4 Identities = 19/68 (27%), Positives = 36/68 (52%) Frame = -2 Query: 643 TIIKAGNVTFGQLLVNQKNEIIDFVFH*QSQNSXXRHLKINNRLSINLYLMQVLNRIL*R 464 T+I+ G V QL++N EI++++ + SQ+ NN + +YL ++ I+ Sbjct: 215 TLIQQGKVKPNQLIINNLQEILNYLPNLGSQDVVQAFTTKNNDNMLTIYLASLMRSIIAY 274 Query: 463 RRLYSNQS 440 L +NQ+ Sbjct: 275 HNLINNQA 282 >UniRef50_Q9G802 Cluster: NADH-ubiquinone oxidoreductase chain 4L; n=1; Triatoma dimidiata|Rep: NADH-ubiquinone oxidoreductase chain 4L - Triatoma dimidiata (Kissing bug) Length = 97 Score = 33.1 bits (72), Expect = 7.5 Identities = 13/30 (43%), Positives = 20/30 (66%) Frame = -1 Query: 302 FCFFVNLSIFRFNYVIKMVYQTFSICKGAL 213 F FF L +F +Y +V+ TFS+C+GA+ Sbjct: 43 FLFFSFLVMFNLSYYFILVFLTFSVCEGAM 72 Database: uniref50 Posted date: Oct 5, 2007 11:19 AM Number of letters in database: 575,637,011 Number of sequences in database: 1,657,284 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 566,967,443 Number of Sequences: 1657284 Number of extensions: 9173912 Number of successful extensions: 13896 Number of sequences better than 10.0: 2 Number of HSP's better than 10.0 without gapping: 13580 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 13895 length of database: 575,637,011 effective HSP length: 99 effective length of database: 411,565,895 effective search space used: 61734884250 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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