Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brP-0599
         (749 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF592539-1|ABQ95985.1|  630|Tribolium castaneum beta-N-acetylglu...    23   3.4  
AM712901-1|CAN84640.1|  205|Tribolium castaneum hypothetical pro...    22   4.6  
AM292370-1|CAL23182.1|  418|Tribolium castaneum gustatory recept...    22   4.6  

>EF592539-1|ABQ95985.1|  630|Tribolium castaneum
           beta-N-acetylglucosaminidase FDL protein.
          Length = 630

 Score = 22.6 bits (46), Expect = 3.4
 Identities = 7/12 (58%), Positives = 10/12 (83%)
 Frame = +2

Query: 392 WQSVHLDKKMLL 427
           WQ +HL+KK +L
Sbjct: 537 WQQLHLNKKQIL 548


>AM712901-1|CAN84640.1|  205|Tribolium castaneum hypothetical
           protein protein.
          Length = 205

 Score = 22.2 bits (45), Expect = 4.6
 Identities = 8/15 (53%), Positives = 12/15 (80%)
 Frame = -2

Query: 679 LIKYFILIIYESTII 635
           ++KYFI+ IY  TI+
Sbjct: 40  ILKYFIIAIYVLTIL 54


>AM292370-1|CAL23182.1|  418|Tribolium castaneum gustatory
          receptor candidate 49 protein.
          Length = 418

 Score = 22.2 bits (45), Expect = 4.6
 Identities = 9/21 (42%), Positives = 16/21 (76%)
 Frame = -2

Query: 70 MLRSSSQPSWC*VFSKTHTYL 8
          +L SS+QP++  + +K +TYL
Sbjct: 10 LLDSSTQPNYLILSNKNNTYL 30


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 147,443
Number of Sequences: 336
Number of extensions: 2801
Number of successful extensions: 7
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 20027417
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)