Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brP-0598
         (700 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    24   1.4  
AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ...    23   3.2  
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ...    23   3.2  
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ...    23   3.2  
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ...    23   3.2  
AM292366-1|CAL23178.2|  379|Tribolium castaneum gustatory recept...    23   3.2  
AM292329-1|CAL23141.2|  379|Tribolium castaneum gustatory recept...    23   3.2  
DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulati...    22   5.5  
AM292362-1|CAL23174.2|  398|Tribolium castaneum gustatory recept...    21   9.7  

>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
            candidate 46 protein.
          Length = 1451

 Score = 23.8 bits (49), Expect = 1.4
 Identities = 20/71 (28%), Positives = 33/71 (46%)
 Frame = -3

Query: 467  LIFFGSKMADSIYSRSNLC*ITQLQEYHRSNYTLVSVVFT*IQANL*IICNRCLWASVTT 288
            L+ FG        +   LC + QLQE        +  V T   AN+  IC+ C ++++  
Sbjct: 877  LLMFGISFLLVTQTIFALCVVLQLQENDWLQLGYLIFVSTLYTANVVCICHVC-YSTIQE 935

Query: 287  *HQVGCELVHR 255
              + G EL+H+
Sbjct: 936  VSKSG-ELIHK 945


>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
            variant 2 protein.
          Length = 1558

 Score = 22.6 bits (46), Expect = 3.2
 Identities = 8/25 (32%), Positives = 14/25 (56%)
 Frame = +2

Query: 575  LAKNHSCKINNNIPPKVTLNKMHIN 649
            +A+NH   + ++IP K      H+N
Sbjct: 1502 VARNHRNSVASSIPAKDVFENGHVN 1526


>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
            variant 1 protein.
          Length = 1558

 Score = 22.6 bits (46), Expect = 3.2
 Identities = 8/25 (32%), Positives = 14/25 (56%)
 Frame = +2

Query: 575  LAKNHSCKINNNIPPKVTLNKMHIN 649
            +A+NH   + ++IP K      H+N
Sbjct: 1502 VARNHRNSVASSIPAKDVFENGHVN 1526


>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase CHS1B
            protein.
          Length = 1558

 Score = 22.6 bits (46), Expect = 3.2
 Identities = 8/25 (32%), Positives = 14/25 (56%)
 Frame = +2

Query: 575  LAKNHSCKINNNIPPKVTLNKMHIN 649
            +A+NH   + ++IP K      H+N
Sbjct: 1502 VARNHRNSVASSIPAKDVFENGHVN 1526


>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase CHS1A
            protein.
          Length = 1558

 Score = 22.6 bits (46), Expect = 3.2
 Identities = 8/25 (32%), Positives = 14/25 (56%)
 Frame = +2

Query: 575  LAKNHSCKINNNIPPKVTLNKMHIN 649
            +A+NH   + ++IP K      H+N
Sbjct: 1502 VARNHRNSVASSIPAKDVFENGHVN 1526


>AM292366-1|CAL23178.2|  379|Tribolium castaneum gustatory receptor
           candidate 45 protein.
          Length = 379

 Score = 22.6 bits (46), Expect = 3.2
 Identities = 7/11 (63%), Positives = 9/11 (81%)
 Frame = -1

Query: 544 WIKLKNNISYI 512
           WI+L NN+ YI
Sbjct: 107 WIRLNNNLQYI 117


>AM292329-1|CAL23141.2|  379|Tribolium castaneum gustatory receptor
           candidate 8 protein.
          Length = 379

 Score = 22.6 bits (46), Expect = 3.2
 Identities = 7/11 (63%), Positives = 9/11 (81%)
 Frame = -1

Query: 544 WIKLKNNISYI 512
           WI+L NN+ YI
Sbjct: 107 WIRLNNNLQYI 117


>DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulation
           protein.
          Length = 947

 Score = 21.8 bits (44), Expect = 5.5
 Identities = 10/23 (43%), Positives = 13/23 (56%)
 Frame = +1

Query: 1   LLCEGPFVASGDSKKPRVTGPEY 69
           +L EG      D++KP V G EY
Sbjct: 839 ILAEGGCPNLYDARKPYVNGSEY 861


>AM292362-1|CAL23174.2|  398|Tribolium castaneum gustatory receptor
           candidate 41 protein.
          Length = 398

 Score = 21.0 bits (42), Expect = 9.7
 Identities = 9/28 (32%), Positives = 16/28 (57%)
 Frame = +2

Query: 359 QRLRYNCFCGILVVVLFNTSWILSRYYL 442
           Q  R+  FC I V  + +T+  + R+Y+
Sbjct: 15  QLFRFGQFCAICVPKITSTNNEVPRWYI 42


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 171,383
Number of Sequences: 336
Number of extensions: 3839
Number of successful extensions: 14
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18426585
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)