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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brP-0596
         (600 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

11_06_0648 + 25873779-25874279,25874418-25875548                       33   0.17 
11_03_0135 - 10547460-10547558,10547926-10548086,10548183-105483...    31   0.93 
11_01_0405 + 3079275-3079622,3079816-3079903,3081411-3081543,308...    31   0.93 
11_06_0660 - 26005210-26006150,26006440-26006467,26007307-260078...    30   1.2  
02_05_0046 - 25398412-25398594,25399022-25399060,25399896-254003...    30   1.6  
12_02_0911 + 24236374-24237582                                         28   6.6  
11_04_0364 - 16791774-16792490,16792545-16793561,16793856-167939...    28   6.6  
08_02_0553 - 18561912-18563042                                         28   6.6  
03_01_0009 - 89127-89924,90090-90518,90582-90716,91102-91382,916...    28   6.6  
02_05_0372 + 28370589-28371857                                         28   6.6  
02_04_0001 - 18816492-18816741,18816881-18817050,18817244-188173...    28   6.6  
02_02_0693 + 13006243-13006245,13006439-13006501,13006608-130066...    28   6.6  
11_06_0682 - 26253319-26253575,26254009-26254114                       27   8.7  
08_01_0690 - 6106689-6106988,6107278-6107391,6107528-6107596,610...    27   8.7  

>11_06_0648 + 25873779-25874279,25874418-25875548
          Length = 543

 Score = 33.1 bits (72), Expect = 0.17
 Identities = 22/67 (32%), Positives = 38/67 (56%), Gaps = 1/67 (1%)
 Frame = -1

Query: 273 QPNTAVRHSLTLAIFRSVTFSDDSARFNSSFFVIMLLSTLAISRRVACLSAVSLPTAAKG 94
           Q  +AV + L +A  ++  F D  +R +S   ++ ++S L I+RR+  +  + LPT   G
Sbjct: 92  QDKSAV-YQLVMARRQADRFRDVQSRIDSYLLLVPVISLLDITRRLDRIYNILLPTNTPG 150

Query: 93  PAR-AFS 76
           P+  AFS
Sbjct: 151 PSMPAFS 157


>11_03_0135 -
           10547460-10547558,10547926-10548086,10548183-10548306,
           10548566-10548729,10549803-10549883,10549973-10550097,
           10550200-10550430,10550566-10550588,10551055-10551539,
           10551678-10552075,10552903-10552988,10553120-10553397,
           10553494-10553714,10553927-10554018,10554148-10554213,
           10555855-10556022
          Length = 933

 Score = 30.7 bits (66), Expect = 0.93
 Identities = 24/104 (23%), Positives = 47/104 (45%), Gaps = 2/104 (1%)
 Frame = +2

Query: 20  CERTRTQTRVESLKILLEELKARAGPFAAVGKLTADKHATRRLIANVDKSIITKKDELKR 199
           CE  RT+ ++E  K +LE+ + +    +   K+ A   +++ L  +   S  TK+D  + 
Sbjct: 126 CEECRTEMQIEKEKSILEKSQVKVSTISVGSKVKAANVSSKDLNVSNISSKSTKEDAEEG 185

Query: 200 ALSSLNVTDRKIANVRECL--TAVFGCLQRRGCSGRMDRYKAHI 325
            + S   +  K  + R C+  +      + +  SGR D +   I
Sbjct: 186 IVPSGCTSTGKEEDGRSCIGGSEAANKNEEQTSSGRNDDFNLKI 229


>11_01_0405 +
           3079275-3079622,3079816-3079903,3081411-3081543,
           3081642-3082395
          Length = 440

 Score = 30.7 bits (66), Expect = 0.93
 Identities = 16/42 (38%), Positives = 24/42 (57%)
 Frame = -1

Query: 273 QPNTAVRHSLTLAIFRSVTFSDDSARFNSSFFVIMLLSTLAI 148
           QP++ + HSL  + FRSV+FS  S   +S  F     S ++I
Sbjct: 276 QPDSILAHSLNESSFRSVSFSKSSVMDHSMHFSSAQFSDISI 317


>11_06_0660 -
           26005210-26006150,26006440-26006467,26007307-26007838,
           26008863-26009008
          Length = 548

 Score = 30.3 bits (65), Expect = 1.2
 Identities = 19/62 (30%), Positives = 33/62 (53%)
 Frame = -1

Query: 273 QPNTAVRHSLTLAIFRSVTFSDDSARFNSSFFVIMLLSTLAISRRVACLSAVSLPTAAKG 94
           Q  +AV + L +A  ++  F D  +R +S   V   +S + I+RR+  +  + LPT   G
Sbjct: 151 QDKSAV-YRLVMAGRQAERFRDVQSRIDSYLLVFPFISHIDITRRLDRIYNILLPTNTPG 209

Query: 93  PA 88
           P+
Sbjct: 210 PS 211


>02_05_0046 -
           25398412-25398594,25399022-25399060,25399896-25400360,
           25400758-25400816,25400920-25401748,25402554-25402898,
           25402973-25403435,25403537-25403640,25403692-25403901,
           25404933-25405088,25405774-25406052,25406237-25406986,
           25407141-25407232,25407977-25408361,25408672-25408752,
           25409196-25409354,25409399-25409506,25409604-25409666,
           25409764-25409835,25409932-25410366
          Length = 1758

 Score = 29.9 bits (64), Expect = 1.6
 Identities = 26/81 (32%), Positives = 36/81 (44%)
 Frame = +2

Query: 47  VESLKILLEELKARAGPFAAVGKLTADKHATRRLIANVDKSIITKKDELKRALSSLNVTD 226
           VE  K+ L + K R  P      LT+D    RR++  + K     K EL + L  L   +
Sbjct: 432 VEQEKLALGQRKRRRCP-----PLTSDDRRHRRILHMLKKKKFVLKVELHKWLEGLEKEN 486

Query: 227 RKIANVRECLTAVFGCLQRRG 289
            KI + R+ LT     LQ  G
Sbjct: 487 GKIMD-RKTLTRTLNKLQEEG 506


>12_02_0911 + 24236374-24237582
          Length = 402

 Score = 27.9 bits (59), Expect = 6.6
 Identities = 15/47 (31%), Positives = 25/47 (53%)
 Frame = +2

Query: 224 DRKIANVRECLTAVFGCLQRRGCSGRMDRYKAHISLPQESIEQLQKF 364
           +RKI+     LT V  CL+ R  +G     + H++  +E+  + QKF
Sbjct: 298 ERKISASLYALTGVSECLRIRAAAGATAAARDHLTGLREACRKKQKF 344


>11_04_0364 - 16791774-16792490,16792545-16793561,16793856-16793920,
            16794787-16796964,16797065-16797322,16799815-16800172
          Length = 1530

 Score = 27.9 bits (59), Expect = 6.6
 Identities = 11/45 (24%), Positives = 26/45 (57%)
 Frame = +2

Query: 338  ESIEQLQKFYDEKRSSRKMKLQLSFDLXASTSDSFNDRAENGTPT 472
            E I+Q+ + +DE  ++R+   + + ++  +T+  FN  + +  PT
Sbjct: 1049 EKIDQILEKFDEIEANRRKSFEETTNIIKATTSIFNSASSSTPPT 1093


>08_02_0553 - 18561912-18563042
          Length = 376

 Score = 27.9 bits (59), Expect = 6.6
 Identities = 18/48 (37%), Positives = 25/48 (52%), Gaps = 1/48 (2%)
 Frame = -1

Query: 165 LSTLAISRRVACLSAVSLPTAAKGPAR-AFSSSSRIFKDSTRVCVRVL 25
           L  L  + R+  +    LPT A GPAR + +   R+   STR CV V+
Sbjct: 277 LLQLVSNERLRSVEHRVLPTGAAGPARVSVACFFRLAYSSTRPCVPVV 324


>03_01_0009 -
           89127-89924,90090-90518,90582-90716,91102-91382,
           91634-91809,91899-92011,92157-92278,92375-92594
          Length = 757

 Score = 27.9 bits (59), Expect = 6.6
 Identities = 13/39 (33%), Positives = 24/39 (61%), Gaps = 1/39 (2%)
 Frame = +2

Query: 380 SSRKMKLQLSFDLXASTSDSFN-DRAENGTPTFADELKI 493
           + +K++L+  F L  ++  +F  +  +N T +FAD LKI
Sbjct: 417 ADKKLRLEKLFVLQGNSYSTFTWEEIDNATSSFADNLKI 455


>02_05_0372 + 28370589-28371857
          Length = 422

 Score = 27.9 bits (59), Expect = 6.6
 Identities = 22/93 (23%), Positives = 40/93 (43%), Gaps = 5/93 (5%)
 Frame = +2

Query: 41  TRVESLKILLEELKARAGPFAAVGKLTADKHATRRLIANV--DKSIITKKDELKRALSSL 214
           T+++S++  +    A  G F A G +        + +A    D S     +E    L++L
Sbjct: 124 TKLKSMRARMAGDVAMQGEFVASGGVRVVGRVMAQALAESGGDFSAFAACEEAAAVLAAL 183

Query: 215 NVTDR---KIANVRECLTAVFGCLQRRGCSGRM 304
            ++D    ++    EC+  V   LQR G   R+
Sbjct: 184 PLSDEASVRVVLAPECIRPVMALLQRGGAEARL 216


>02_04_0001 -
           18816492-18816741,18816881-18817050,18817244-18817388,
           18817495-18817565,18817910-18817993,18818103-18818222,
           18818310-18818480,18818955-18819044,18821893-18821985,
           18822073-18822405
          Length = 508

 Score = 27.9 bits (59), Expect = 6.6
 Identities = 16/53 (30%), Positives = 23/53 (43%)
 Frame = -1

Query: 282 LCRQPNTAVRHSLTLAIFRSVTFSDDSARFNSSFFVIMLLSTLAISRRVACLS 124
           +  QP +A+R  L L +F S   +DDS R   S     L+          C+S
Sbjct: 312 MSEQPTSAIRGELLLELFSSYDTTDDSERNTLSLRSFSLILIHDSDMHSCCIS 364


>02_02_0693 +
           13006243-13006245,13006439-13006501,13006608-13006687,
           13007964-13008072,13009027-13009074,13011044-13011203,
           13011295-13011458,13011549-13011902
          Length = 326

 Score = 27.9 bits (59), Expect = 6.6
 Identities = 21/74 (28%), Positives = 34/74 (45%)
 Frame = +2

Query: 179 KKDELKRALSSLNVTDRKIANVRECLTAVFGCLQRRGCSGRMDRYKAHISLPQESIEQLQ 358
           ++D+L   +  L   +  +   +E    V   LQR   S   D Y  + +L      Q +
Sbjct: 155 ERDKLADPMYKLEHQEEDLKKKKEA-EPVLVRLQRLSDSRHSDDYALNRALRDRLRSQKK 213

Query: 359 KFYDEKRSSRKMKL 400
           +  +EKRS+RKM L
Sbjct: 214 RVAEEKRSARKMGL 227


>11_06_0682 - 26253319-26253575,26254009-26254114
          Length = 120

 Score = 27.5 bits (58), Expect = 8.7
 Identities = 13/27 (48%), Positives = 16/27 (59%)
 Frame = +1

Query: 487 ENLFXEFSYGQKPETGLGKRRKAVDLR 567
           E L+ +   G +PETGL K RKA   R
Sbjct: 3   EKLWDDVVAGPRPETGLEKLRKAATTR 29


>08_01_0690 -
           6106689-6106988,6107278-6107391,6107528-6107596,
           6107754-6107858,6108412-6108522,6108957-6109199
          Length = 313

 Score = 27.5 bits (58), Expect = 8.7
 Identities = 14/46 (30%), Positives = 23/46 (50%)
 Frame = +2

Query: 110 GKLTADKHATRRLIANVDKSIITKKDELKRALSSLNVTDRKIANVR 247
           G+  + +   +R+    D+    K D+L R L  L V  R IAN++
Sbjct: 66  GRSRSARLGLQRVSLEEDQGSSDKSDDLVRVLRELTVVQRNIANLQ 111


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,432,356
Number of Sequences: 37544
Number of extensions: 232645
Number of successful extensions: 842
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 830
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 841
length of database: 14,793,348
effective HSP length: 78
effective length of database: 11,864,916
effective search space used: 1435654836
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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