BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= brP-0596 (600 letters) Database: rice 37,544 sequences; 14,793,348 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value 11_06_0648 + 25873779-25874279,25874418-25875548 33 0.17 11_03_0135 - 10547460-10547558,10547926-10548086,10548183-105483... 31 0.93 11_01_0405 + 3079275-3079622,3079816-3079903,3081411-3081543,308... 31 0.93 11_06_0660 - 26005210-26006150,26006440-26006467,26007307-260078... 30 1.2 02_05_0046 - 25398412-25398594,25399022-25399060,25399896-254003... 30 1.6 12_02_0911 + 24236374-24237582 28 6.6 11_04_0364 - 16791774-16792490,16792545-16793561,16793856-167939... 28 6.6 08_02_0553 - 18561912-18563042 28 6.6 03_01_0009 - 89127-89924,90090-90518,90582-90716,91102-91382,916... 28 6.6 02_05_0372 + 28370589-28371857 28 6.6 02_04_0001 - 18816492-18816741,18816881-18817050,18817244-188173... 28 6.6 02_02_0693 + 13006243-13006245,13006439-13006501,13006608-130066... 28 6.6 11_06_0682 - 26253319-26253575,26254009-26254114 27 8.7 08_01_0690 - 6106689-6106988,6107278-6107391,6107528-6107596,610... 27 8.7 >11_06_0648 + 25873779-25874279,25874418-25875548 Length = 543 Score = 33.1 bits (72), Expect = 0.17 Identities = 22/67 (32%), Positives = 38/67 (56%), Gaps = 1/67 (1%) Frame = -1 Query: 273 QPNTAVRHSLTLAIFRSVTFSDDSARFNSSFFVIMLLSTLAISRRVACLSAVSLPTAAKG 94 Q +AV + L +A ++ F D +R +S ++ ++S L I+RR+ + + LPT G Sbjct: 92 QDKSAV-YQLVMARRQADRFRDVQSRIDSYLLLVPVISLLDITRRLDRIYNILLPTNTPG 150 Query: 93 PAR-AFS 76 P+ AFS Sbjct: 151 PSMPAFS 157 >11_03_0135 - 10547460-10547558,10547926-10548086,10548183-10548306, 10548566-10548729,10549803-10549883,10549973-10550097, 10550200-10550430,10550566-10550588,10551055-10551539, 10551678-10552075,10552903-10552988,10553120-10553397, 10553494-10553714,10553927-10554018,10554148-10554213, 10555855-10556022 Length = 933 Score = 30.7 bits (66), Expect = 0.93 Identities = 24/104 (23%), Positives = 47/104 (45%), Gaps = 2/104 (1%) Frame = +2 Query: 20 CERTRTQTRVESLKILLEELKARAGPFAAVGKLTADKHATRRLIANVDKSIITKKDELKR 199 CE RT+ ++E K +LE+ + + + K+ A +++ L + S TK+D + Sbjct: 126 CEECRTEMQIEKEKSILEKSQVKVSTISVGSKVKAANVSSKDLNVSNISSKSTKEDAEEG 185 Query: 200 ALSSLNVTDRKIANVRECL--TAVFGCLQRRGCSGRMDRYKAHI 325 + S + K + R C+ + + + SGR D + I Sbjct: 186 IVPSGCTSTGKEEDGRSCIGGSEAANKNEEQTSSGRNDDFNLKI 229 >11_01_0405 + 3079275-3079622,3079816-3079903,3081411-3081543, 3081642-3082395 Length = 440 Score = 30.7 bits (66), Expect = 0.93 Identities = 16/42 (38%), Positives = 24/42 (57%) Frame = -1 Query: 273 QPNTAVRHSLTLAIFRSVTFSDDSARFNSSFFVIMLLSTLAI 148 QP++ + HSL + FRSV+FS S +S F S ++I Sbjct: 276 QPDSILAHSLNESSFRSVSFSKSSVMDHSMHFSSAQFSDISI 317 >11_06_0660 - 26005210-26006150,26006440-26006467,26007307-26007838, 26008863-26009008 Length = 548 Score = 30.3 bits (65), Expect = 1.2 Identities = 19/62 (30%), Positives = 33/62 (53%) Frame = -1 Query: 273 QPNTAVRHSLTLAIFRSVTFSDDSARFNSSFFVIMLLSTLAISRRVACLSAVSLPTAAKG 94 Q +AV + L +A ++ F D +R +S V +S + I+RR+ + + LPT G Sbjct: 151 QDKSAV-YRLVMAGRQAERFRDVQSRIDSYLLVFPFISHIDITRRLDRIYNILLPTNTPG 209 Query: 93 PA 88 P+ Sbjct: 210 PS 211 >02_05_0046 - 25398412-25398594,25399022-25399060,25399896-25400360, 25400758-25400816,25400920-25401748,25402554-25402898, 25402973-25403435,25403537-25403640,25403692-25403901, 25404933-25405088,25405774-25406052,25406237-25406986, 25407141-25407232,25407977-25408361,25408672-25408752, 25409196-25409354,25409399-25409506,25409604-25409666, 25409764-25409835,25409932-25410366 Length = 1758 Score = 29.9 bits (64), Expect = 1.6 Identities = 26/81 (32%), Positives = 36/81 (44%) Frame = +2 Query: 47 VESLKILLEELKARAGPFAAVGKLTADKHATRRLIANVDKSIITKKDELKRALSSLNVTD 226 VE K+ L + K R P LT+D RR++ + K K EL + L L + Sbjct: 432 VEQEKLALGQRKRRRCP-----PLTSDDRRHRRILHMLKKKKFVLKVELHKWLEGLEKEN 486 Query: 227 RKIANVRECLTAVFGCLQRRG 289 KI + R+ LT LQ G Sbjct: 487 GKIMD-RKTLTRTLNKLQEEG 506 >12_02_0911 + 24236374-24237582 Length = 402 Score = 27.9 bits (59), Expect = 6.6 Identities = 15/47 (31%), Positives = 25/47 (53%) Frame = +2 Query: 224 DRKIANVRECLTAVFGCLQRRGCSGRMDRYKAHISLPQESIEQLQKF 364 +RKI+ LT V CL+ R +G + H++ +E+ + QKF Sbjct: 298 ERKISASLYALTGVSECLRIRAAAGATAAARDHLTGLREACRKKQKF 344 >11_04_0364 - 16791774-16792490,16792545-16793561,16793856-16793920, 16794787-16796964,16797065-16797322,16799815-16800172 Length = 1530 Score = 27.9 bits (59), Expect = 6.6 Identities = 11/45 (24%), Positives = 26/45 (57%) Frame = +2 Query: 338 ESIEQLQKFYDEKRSSRKMKLQLSFDLXASTSDSFNDRAENGTPT 472 E I+Q+ + +DE ++R+ + + ++ +T+ FN + + PT Sbjct: 1049 EKIDQILEKFDEIEANRRKSFEETTNIIKATTSIFNSASSSTPPT 1093 >08_02_0553 - 18561912-18563042 Length = 376 Score = 27.9 bits (59), Expect = 6.6 Identities = 18/48 (37%), Positives = 25/48 (52%), Gaps = 1/48 (2%) Frame = -1 Query: 165 LSTLAISRRVACLSAVSLPTAAKGPAR-AFSSSSRIFKDSTRVCVRVL 25 L L + R+ + LPT A GPAR + + R+ STR CV V+ Sbjct: 277 LLQLVSNERLRSVEHRVLPTGAAGPARVSVACFFRLAYSSTRPCVPVV 324 >03_01_0009 - 89127-89924,90090-90518,90582-90716,91102-91382, 91634-91809,91899-92011,92157-92278,92375-92594 Length = 757 Score = 27.9 bits (59), Expect = 6.6 Identities = 13/39 (33%), Positives = 24/39 (61%), Gaps = 1/39 (2%) Frame = +2 Query: 380 SSRKMKLQLSFDLXASTSDSFN-DRAENGTPTFADELKI 493 + +K++L+ F L ++ +F + +N T +FAD LKI Sbjct: 417 ADKKLRLEKLFVLQGNSYSTFTWEEIDNATSSFADNLKI 455 >02_05_0372 + 28370589-28371857 Length = 422 Score = 27.9 bits (59), Expect = 6.6 Identities = 22/93 (23%), Positives = 40/93 (43%), Gaps = 5/93 (5%) Frame = +2 Query: 41 TRVESLKILLEELKARAGPFAAVGKLTADKHATRRLIANV--DKSIITKKDELKRALSSL 214 T+++S++ + A G F A G + + +A D S +E L++L Sbjct: 124 TKLKSMRARMAGDVAMQGEFVASGGVRVVGRVMAQALAESGGDFSAFAACEEAAAVLAAL 183 Query: 215 NVTDR---KIANVRECLTAVFGCLQRRGCSGRM 304 ++D ++ EC+ V LQR G R+ Sbjct: 184 PLSDEASVRVVLAPECIRPVMALLQRGGAEARL 216 >02_04_0001 - 18816492-18816741,18816881-18817050,18817244-18817388, 18817495-18817565,18817910-18817993,18818103-18818222, 18818310-18818480,18818955-18819044,18821893-18821985, 18822073-18822405 Length = 508 Score = 27.9 bits (59), Expect = 6.6 Identities = 16/53 (30%), Positives = 23/53 (43%) Frame = -1 Query: 282 LCRQPNTAVRHSLTLAIFRSVTFSDDSARFNSSFFVIMLLSTLAISRRVACLS 124 + QP +A+R L L +F S +DDS R S L+ C+S Sbjct: 312 MSEQPTSAIRGELLLELFSSYDTTDDSERNTLSLRSFSLILIHDSDMHSCCIS 364 >02_02_0693 + 13006243-13006245,13006439-13006501,13006608-13006687, 13007964-13008072,13009027-13009074,13011044-13011203, 13011295-13011458,13011549-13011902 Length = 326 Score = 27.9 bits (59), Expect = 6.6 Identities = 21/74 (28%), Positives = 34/74 (45%) Frame = +2 Query: 179 KKDELKRALSSLNVTDRKIANVRECLTAVFGCLQRRGCSGRMDRYKAHISLPQESIEQLQ 358 ++D+L + L + + +E V LQR S D Y + +L Q + Sbjct: 155 ERDKLADPMYKLEHQEEDLKKKKEA-EPVLVRLQRLSDSRHSDDYALNRALRDRLRSQKK 213 Query: 359 KFYDEKRSSRKMKL 400 + +EKRS+RKM L Sbjct: 214 RVAEEKRSARKMGL 227 >11_06_0682 - 26253319-26253575,26254009-26254114 Length = 120 Score = 27.5 bits (58), Expect = 8.7 Identities = 13/27 (48%), Positives = 16/27 (59%) Frame = +1 Query: 487 ENLFXEFSYGQKPETGLGKRRKAVDLR 567 E L+ + G +PETGL K RKA R Sbjct: 3 EKLWDDVVAGPRPETGLEKLRKAATTR 29 >08_01_0690 - 6106689-6106988,6107278-6107391,6107528-6107596, 6107754-6107858,6108412-6108522,6108957-6109199 Length = 313 Score = 27.5 bits (58), Expect = 8.7 Identities = 14/46 (30%), Positives = 23/46 (50%) Frame = +2 Query: 110 GKLTADKHATRRLIANVDKSIITKKDELKRALSSLNVTDRKIANVR 247 G+ + + +R+ D+ K D+L R L L V R IAN++ Sbjct: 66 GRSRSARLGLQRVSLEEDQGSSDKSDDLVRVLRELTVVQRNIANLQ 111 Database: rice Posted date: Oct 4, 2007 10:57 AM Number of letters in database: 14,793,348 Number of sequences in database: 37,544 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 13,432,356 Number of Sequences: 37544 Number of extensions: 232645 Number of successful extensions: 842 Number of sequences better than 10.0: 14 Number of HSP's better than 10.0 without gapping: 830 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 841 length of database: 14,793,348 effective HSP length: 78 effective length of database: 11,864,916 effective search space used: 1435654836 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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