Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brP-0596
(600 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AL590377-2|CAI14630.2| 1406|Homo sapiens chromosome 9 open readi... 32 1.3
AL354738-1|CAI16195.2| 1406|Homo sapiens chromosome 9 open readi... 32 1.3
AL354711-1|CAH72682.2| 1406|Homo sapiens chromosome 9 open readi... 32 1.3
AL162725-3|CAH70424.1| 1406|Homo sapiens chromosome 9 open readi... 32 1.3
AL133214-3|CAH70743.2| 1406|Homo sapiens chromosome 9 open readi... 32 1.3
AF459743-1|AAO14547.1| 615|Homo sapiens NEDD8 ultimate buster-1... 32 1.3
BC046354-1|AAH46354.1| 601|Homo sapiens negative regulator of u... 32 1.8
AY129295-1|AAN01355.1| 601|Homo sapiens NEDD8 ultimate buster-1... 32 1.8
AF300717-1|AAK21001.1| 601|Homo sapiens NUB1 protein. 32 1.8
AC005486-1|AAS02030.1| 601|Homo sapiens unknown protein. 32 1.8
AK000283-1|BAA91052.1| 1084|Homo sapiens protein ( Homo sapiens ... 31 2.3
BC086869-1|AAH86869.1| 954|Homo sapiens FLJ25770 protein protein. 29 9.4
AK128533-1|BAC87485.1| 209|Homo sapiens protein ( Homo sapiens ... 29 9.4
AK123542-1|BAC85640.1| 187|Homo sapiens protein ( Homo sapiens ... 29 9.4
>AL590377-2|CAI14630.2| 1406|Homo sapiens chromosome 9 open reading
frame 39 protein.
Length = 1406
Score = 32.3 bits (70), Expect = 1.3
Identities = 22/94 (23%), Positives = 42/94 (44%)
Frame = +2
Query: 275 LQRRGCSGRMDRYKAHISLPQESIEQLQKFYDEKRSSRKMKLQLSFDLXASTSDSFNDRA 454
+Q+ +D K HIS+ + +I++L + E+R + + ++ ST +
Sbjct: 627 IQKMNLEEELDELKVHISIDKAAIQELNRCVAERREEQLFRSGEDDEVKRSTPEKNGKEM 686
Query: 455 ENGTPTFADELKIYLXSFHMDKNRKLVLENGEKL 556
T EL+ L SF +K + + E +KL
Sbjct: 687 LEQTLQKVTELENRLKSF--EKRSRKLKEGNKKL 718
>AL354738-1|CAI16195.2| 1406|Homo sapiens chromosome 9 open reading
frame 39 protein.
Length = 1406
Score = 32.3 bits (70), Expect = 1.3
Identities = 22/94 (23%), Positives = 42/94 (44%)
Frame = +2
Query: 275 LQRRGCSGRMDRYKAHISLPQESIEQLQKFYDEKRSSRKMKLQLSFDLXASTSDSFNDRA 454
+Q+ +D K HIS+ + +I++L + E+R + + ++ ST +
Sbjct: 627 IQKMNLEEELDELKVHISIDKAAIQELNRCVAERREEQLFRSGEDDEVKRSTPEKNGKEM 686
Query: 455 ENGTPTFADELKIYLXSFHMDKNRKLVLENGEKL 556
T EL+ L SF +K + + E +KL
Sbjct: 687 LEQTLQKVTELENRLKSF--EKRSRKLKEGNKKL 718
>AL354711-1|CAH72682.2| 1406|Homo sapiens chromosome 9 open reading
frame 39 protein.
Length = 1406
Score = 32.3 bits (70), Expect = 1.3
Identities = 22/94 (23%), Positives = 42/94 (44%)
Frame = +2
Query: 275 LQRRGCSGRMDRYKAHISLPQESIEQLQKFYDEKRSSRKMKLQLSFDLXASTSDSFNDRA 454
+Q+ +D K HIS+ + +I++L + E+R + + ++ ST +
Sbjct: 627 IQKMNLEEELDELKVHISIDKAAIQELNRCVAERREEQLFRSGEDDEVKRSTPEKNGKEM 686
Query: 455 ENGTPTFADELKIYLXSFHMDKNRKLVLENGEKL 556
T EL+ L SF +K + + E +KL
Sbjct: 687 LEQTLQKVTELENRLKSF--EKRSRKLKEGNKKL 718
>AL162725-3|CAH70424.1| 1406|Homo sapiens chromosome 9 open reading
frame 39 protein.
Length = 1406
Score = 32.3 bits (70), Expect = 1.3
Identities = 22/94 (23%), Positives = 42/94 (44%)
Frame = +2
Query: 275 LQRRGCSGRMDRYKAHISLPQESIEQLQKFYDEKRSSRKMKLQLSFDLXASTSDSFNDRA 454
+Q+ +D K HIS+ + +I++L + E+R + + ++ ST +
Sbjct: 627 IQKMNLEEELDELKVHISIDKAAIQELNRCVAERREEQLFRSGEDDEVKRSTPEKNGKEM 686
Query: 455 ENGTPTFADELKIYLXSFHMDKNRKLVLENGEKL 556
T EL+ L SF +K + + E +KL
Sbjct: 687 LEQTLQKVTELENRLKSF--EKRSRKLKEGNKKL 718
>AL133214-3|CAH70743.2| 1406|Homo sapiens chromosome 9 open reading
frame 39 protein.
Length = 1406
Score = 32.3 bits (70), Expect = 1.3
Identities = 22/94 (23%), Positives = 42/94 (44%)
Frame = +2
Query: 275 LQRRGCSGRMDRYKAHISLPQESIEQLQKFYDEKRSSRKMKLQLSFDLXASTSDSFNDRA 454
+Q+ +D K HIS+ + +I++L + E+R + + ++ ST +
Sbjct: 627 IQKMNLEEELDELKVHISIDKAAIQELNRCVAERREEQLFRSGEDDEVKRSTPEKNGKEM 686
Query: 455 ENGTPTFADELKIYLXSFHMDKNRKLVLENGEKL 556
T EL+ L SF +K + + E +KL
Sbjct: 687 LEQTLQKVTELENRLKSF--EKRSRKLKEGNKKL 718
>AF459743-1|AAO14547.1| 615|Homo sapiens NEDD8 ultimate buster-1
protein.
Length = 615
Score = 32.3 bits (70), Expect = 1.3
Identities = 28/127 (22%), Positives = 55/127 (43%), Gaps = 1/127 (0%)
Frame = +2
Query: 185 DELKRALSSLNVTDRKIANVREC-LTAVFGCLQRRGCSGRMDRYKAHISLPQESIEQLQK 361
++ ++ L + K+ N+ + TA L R C G +D HI+ +E + Q++K
Sbjct: 364 NKARQLFKELYIDPSKVDNLLQLGFTAQEARLGLRACDGNVDHAATHITNRREELAQIRK 423
Query: 362 FYDEKRSSRKMKLQLSFDLXASTSDSFNDRAENGTPTFADELKIYLXSFHMDKNRKLVLE 541
+EK R+ + F G T A + ++ S ++D+ K++L
Sbjct: 424 --EEKEKKRRRLENIRF------------LKGMGYSTHAAQQVLHAASGNLDEALKILLS 469
Query: 542 NGEKLWI 562
N + W+
Sbjct: 470 NPQMWWL 476
>BC046354-1|AAH46354.1| 601|Homo sapiens negative regulator of
ubiquitin-like proteins 1 protein.
Length = 601
Score = 31.9 bits (69), Expect = 1.8
Identities = 20/83 (24%), Positives = 38/83 (45%), Gaps = 1/83 (1%)
Frame = +2
Query: 185 DELKRALSSLNVTDRKIANVREC-LTAVFGCLQRRGCSGRMDRYKAHISLPQESIEQLQK 361
++ ++ L + K+ N+ + TA L R C G +D HI+ +E + Q++K
Sbjct: 364 NKARQLFKELYIDPSKVDNLLQLGFTAQEARLGLRACDGNVDHAATHITNRREELAQIRK 423
Query: 362 FYDEKRSSRKMKLQLSFDLXAST 430
EK+ R ++ + ST
Sbjct: 424 EEKEKKRRRLENIRFLKGMGYST 446
>AY129295-1|AAN01355.1| 601|Homo sapiens NEDD8 ultimate buster-1
protein.
Length = 601
Score = 31.9 bits (69), Expect = 1.8
Identities = 20/83 (24%), Positives = 38/83 (45%), Gaps = 1/83 (1%)
Frame = +2
Query: 185 DELKRALSSLNVTDRKIANVREC-LTAVFGCLQRRGCSGRMDRYKAHISLPQESIEQLQK 361
++ ++ L + K+ N+ + TA L R C G +D HI+ +E + Q++K
Sbjct: 364 NKARQLFKELYIDPSKVDNLLQLGFTAQEARLGLRACDGNVDHAATHITNRREELAQIRK 423
Query: 362 FYDEKRSSRKMKLQLSFDLXAST 430
EK+ R ++ + ST
Sbjct: 424 EEKEKKRRRLENIRFLKGMGYST 446
>AF300717-1|AAK21001.1| 601|Homo sapiens NUB1 protein.
Length = 601
Score = 31.9 bits (69), Expect = 1.8
Identities = 20/83 (24%), Positives = 38/83 (45%), Gaps = 1/83 (1%)
Frame = +2
Query: 185 DELKRALSSLNVTDRKIANVREC-LTAVFGCLQRRGCSGRMDRYKAHISLPQESIEQLQK 361
++ ++ L + K+ N+ + TA L R C G +D HI+ +E + Q++K
Sbjct: 364 NKARQLFKELYIDPSKVDNLLQLGFTAQEARLGLRACDGNVDHAATHITNRREELAQIRK 423
Query: 362 FYDEKRSSRKMKLQLSFDLXAST 430
EK+ R ++ + ST
Sbjct: 424 EEKEKKRRRLENIRFLKGMGYST 446
>AC005486-1|AAS02030.1| 601|Homo sapiens unknown protein.
Length = 601
Score = 31.9 bits (69), Expect = 1.8
Identities = 20/83 (24%), Positives = 38/83 (45%), Gaps = 1/83 (1%)
Frame = +2
Query: 185 DELKRALSSLNVTDRKIANVREC-LTAVFGCLQRRGCSGRMDRYKAHISLPQESIEQLQK 361
++ ++ L + K+ N+ + TA L R C G +D HI+ +E + Q++K
Sbjct: 364 NKARQLFKELYIDPSKVDNLLQLGFTAQEARLGLRACDGNVDHAATHITNRREELAQIRK 423
Query: 362 FYDEKRSSRKMKLQLSFDLXAST 430
EK+ R ++ + ST
Sbjct: 424 EEKEKKRRRLENIRFLKGMGYST 446
>AK000283-1|BAA91052.1| 1084|Homo sapiens protein ( Homo sapiens
cDNA FLJ20276 fis, clone HEP02437. ).
Length = 1084
Score = 31.5 bits (68), Expect = 2.3
Identities = 22/94 (23%), Positives = 42/94 (44%)
Frame = +2
Query: 275 LQRRGCSGRMDRYKAHISLPQESIEQLQKFYDEKRSSRKMKLQLSFDLXASTSDSFNDRA 454
+Q+ +D K HIS+ + +I++L + E+R + + ++ ST +
Sbjct: 306 IQKMNLEEELDELKVHISIDKAAIQELNRCVAERREEQLFRSGEDDEVKRSTPEKNGKEM 365
Query: 455 ENGTPTFADELKIYLXSFHMDKNRKLVLENGEKL 556
T EL+ L SF +K + + E +KL
Sbjct: 366 LEQTLQKVIELENRLKSF--EKRSRKLKEGNKKL 397
>BC086869-1|AAH86869.1| 954|Homo sapiens FLJ25770 protein protein.
Length = 954
Score = 29.5 bits (63), Expect = 9.4
Identities = 25/104 (24%), Positives = 51/104 (49%)
Frame = +2
Query: 113 KLTADKHATRRLIANVDKSIITKKDELKRALSSLNVTDRKIANVRECLTAVFGCLQRRGC 292
+L+ +K +RL + IT D L+R L + N+ +++ + + L + C
Sbjct: 233 ELSLEKEQNKRLWDRDTGNSITI-DHLRRELDNRNMEVQRLEALLKAL--------KSEC 283
Query: 293 SGRMDRYKAHISLPQESIEQLQKFYDEKRSSRKMKLQLSFDLXA 424
G+M+R A I ES+E++ + S+++M ++ +L A
Sbjct: 284 QGQMERQMAAIQGKNESLEKVSSLTAQLESTKEMLRKVVEELTA 327
>AK128533-1|BAC87485.1| 209|Homo sapiens protein ( Homo sapiens
cDNA FLJ46691 fis, clone TRACH3012659, highly similar
to Ig heavy chain V-III region VH26 precursor. ).
Length = 209
Score = 29.5 bits (63), Expect = 9.4
Identities = 19/57 (33%), Positives = 26/57 (45%)
Frame = -1
Query: 189 SSFFVIMLLSTLAISRRVACLSAVSLPTAAKGPARAFSSSSRIFKDSTRVCVRVLSH 19
+S + I L ST IS + V+ PT +GPA F S + D C+R H
Sbjct: 140 NSTYPISLNSTYPISLMLPP-PTVTAPTGPRGPALRFRSEPHVHTDRPERCLRCHLH 195
>AK123542-1|BAC85640.1| 187|Homo sapiens protein ( Homo sapiens
cDNA FLJ41548 fis, clone COLON1000030. ).
Length = 187
Score = 29.5 bits (63), Expect = 9.4
Identities = 19/57 (33%), Positives = 26/57 (45%)
Frame = -1
Query: 189 SSFFVIMLLSTLAISRRVACLSAVSLPTAAKGPARAFSSSSRIFKDSTRVCVRVLSH 19
+S + I L ST IS + V+ PT +GPA F S + D C+R H
Sbjct: 118 NSTYPISLNSTYPISLMLPP-PTVTAPTGPRGPALRFRSEPHVHTDRPERCLRCHLH 173
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 68,661,041
Number of Sequences: 237096
Number of extensions: 1132218
Number of successful extensions: 3239
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 3141
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3238
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 6297951520
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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