BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= brP-0596 (600 letters) Database: human 237,096 sequences; 76,859,062 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value AL590377-2|CAI14630.2| 1406|Homo sapiens chromosome 9 open readi... 32 1.3 AL354738-1|CAI16195.2| 1406|Homo sapiens chromosome 9 open readi... 32 1.3 AL354711-1|CAH72682.2| 1406|Homo sapiens chromosome 9 open readi... 32 1.3 AL162725-3|CAH70424.1| 1406|Homo sapiens chromosome 9 open readi... 32 1.3 AL133214-3|CAH70743.2| 1406|Homo sapiens chromosome 9 open readi... 32 1.3 AF459743-1|AAO14547.1| 615|Homo sapiens NEDD8 ultimate buster-1... 32 1.3 BC046354-1|AAH46354.1| 601|Homo sapiens negative regulator of u... 32 1.8 AY129295-1|AAN01355.1| 601|Homo sapiens NEDD8 ultimate buster-1... 32 1.8 AF300717-1|AAK21001.1| 601|Homo sapiens NUB1 protein. 32 1.8 AC005486-1|AAS02030.1| 601|Homo sapiens unknown protein. 32 1.8 AK000283-1|BAA91052.1| 1084|Homo sapiens protein ( Homo sapiens ... 31 2.3 BC086869-1|AAH86869.1| 954|Homo sapiens FLJ25770 protein protein. 29 9.4 AK128533-1|BAC87485.1| 209|Homo sapiens protein ( Homo sapiens ... 29 9.4 AK123542-1|BAC85640.1| 187|Homo sapiens protein ( Homo sapiens ... 29 9.4 >AL590377-2|CAI14630.2| 1406|Homo sapiens chromosome 9 open reading frame 39 protein. Length = 1406 Score = 32.3 bits (70), Expect = 1.3 Identities = 22/94 (23%), Positives = 42/94 (44%) Frame = +2 Query: 275 LQRRGCSGRMDRYKAHISLPQESIEQLQKFYDEKRSSRKMKLQLSFDLXASTSDSFNDRA 454 +Q+ +D K HIS+ + +I++L + E+R + + ++ ST + Sbjct: 627 IQKMNLEEELDELKVHISIDKAAIQELNRCVAERREEQLFRSGEDDEVKRSTPEKNGKEM 686 Query: 455 ENGTPTFADELKIYLXSFHMDKNRKLVLENGEKL 556 T EL+ L SF +K + + E +KL Sbjct: 687 LEQTLQKVTELENRLKSF--EKRSRKLKEGNKKL 718 >AL354738-1|CAI16195.2| 1406|Homo sapiens chromosome 9 open reading frame 39 protein. Length = 1406 Score = 32.3 bits (70), Expect = 1.3 Identities = 22/94 (23%), Positives = 42/94 (44%) Frame = +2 Query: 275 LQRRGCSGRMDRYKAHISLPQESIEQLQKFYDEKRSSRKMKLQLSFDLXASTSDSFNDRA 454 +Q+ +D K HIS+ + +I++L + E+R + + ++ ST + Sbjct: 627 IQKMNLEEELDELKVHISIDKAAIQELNRCVAERREEQLFRSGEDDEVKRSTPEKNGKEM 686 Query: 455 ENGTPTFADELKIYLXSFHMDKNRKLVLENGEKL 556 T EL+ L SF +K + + E +KL Sbjct: 687 LEQTLQKVTELENRLKSF--EKRSRKLKEGNKKL 718 >AL354711-1|CAH72682.2| 1406|Homo sapiens chromosome 9 open reading frame 39 protein. Length = 1406 Score = 32.3 bits (70), Expect = 1.3 Identities = 22/94 (23%), Positives = 42/94 (44%) Frame = +2 Query: 275 LQRRGCSGRMDRYKAHISLPQESIEQLQKFYDEKRSSRKMKLQLSFDLXASTSDSFNDRA 454 +Q+ +D K HIS+ + +I++L + E+R + + ++ ST + Sbjct: 627 IQKMNLEEELDELKVHISIDKAAIQELNRCVAERREEQLFRSGEDDEVKRSTPEKNGKEM 686 Query: 455 ENGTPTFADELKIYLXSFHMDKNRKLVLENGEKL 556 T EL+ L SF +K + + E +KL Sbjct: 687 LEQTLQKVTELENRLKSF--EKRSRKLKEGNKKL 718 >AL162725-3|CAH70424.1| 1406|Homo sapiens chromosome 9 open reading frame 39 protein. Length = 1406 Score = 32.3 bits (70), Expect = 1.3 Identities = 22/94 (23%), Positives = 42/94 (44%) Frame = +2 Query: 275 LQRRGCSGRMDRYKAHISLPQESIEQLQKFYDEKRSSRKMKLQLSFDLXASTSDSFNDRA 454 +Q+ +D K HIS+ + +I++L + E+R + + ++ ST + Sbjct: 627 IQKMNLEEELDELKVHISIDKAAIQELNRCVAERREEQLFRSGEDDEVKRSTPEKNGKEM 686 Query: 455 ENGTPTFADELKIYLXSFHMDKNRKLVLENGEKL 556 T EL+ L SF +K + + E +KL Sbjct: 687 LEQTLQKVTELENRLKSF--EKRSRKLKEGNKKL 718 >AL133214-3|CAH70743.2| 1406|Homo sapiens chromosome 9 open reading frame 39 protein. Length = 1406 Score = 32.3 bits (70), Expect = 1.3 Identities = 22/94 (23%), Positives = 42/94 (44%) Frame = +2 Query: 275 LQRRGCSGRMDRYKAHISLPQESIEQLQKFYDEKRSSRKMKLQLSFDLXASTSDSFNDRA 454 +Q+ +D K HIS+ + +I++L + E+R + + ++ ST + Sbjct: 627 IQKMNLEEELDELKVHISIDKAAIQELNRCVAERREEQLFRSGEDDEVKRSTPEKNGKEM 686 Query: 455 ENGTPTFADELKIYLXSFHMDKNRKLVLENGEKL 556 T EL+ L SF +K + + E +KL Sbjct: 687 LEQTLQKVTELENRLKSF--EKRSRKLKEGNKKL 718 >AF459743-1|AAO14547.1| 615|Homo sapiens NEDD8 ultimate buster-1 protein. Length = 615 Score = 32.3 bits (70), Expect = 1.3 Identities = 28/127 (22%), Positives = 55/127 (43%), Gaps = 1/127 (0%) Frame = +2 Query: 185 DELKRALSSLNVTDRKIANVREC-LTAVFGCLQRRGCSGRMDRYKAHISLPQESIEQLQK 361 ++ ++ L + K+ N+ + TA L R C G +D HI+ +E + Q++K Sbjct: 364 NKARQLFKELYIDPSKVDNLLQLGFTAQEARLGLRACDGNVDHAATHITNRREELAQIRK 423 Query: 362 FYDEKRSSRKMKLQLSFDLXASTSDSFNDRAENGTPTFADELKIYLXSFHMDKNRKLVLE 541 +EK R+ + F G T A + ++ S ++D+ K++L Sbjct: 424 --EEKEKKRRRLENIRF------------LKGMGYSTHAAQQVLHAASGNLDEALKILLS 469 Query: 542 NGEKLWI 562 N + W+ Sbjct: 470 NPQMWWL 476 >BC046354-1|AAH46354.1| 601|Homo sapiens negative regulator of ubiquitin-like proteins 1 protein. Length = 601 Score = 31.9 bits (69), Expect = 1.8 Identities = 20/83 (24%), Positives = 38/83 (45%), Gaps = 1/83 (1%) Frame = +2 Query: 185 DELKRALSSLNVTDRKIANVREC-LTAVFGCLQRRGCSGRMDRYKAHISLPQESIEQLQK 361 ++ ++ L + K+ N+ + TA L R C G +D HI+ +E + Q++K Sbjct: 364 NKARQLFKELYIDPSKVDNLLQLGFTAQEARLGLRACDGNVDHAATHITNRREELAQIRK 423 Query: 362 FYDEKRSSRKMKLQLSFDLXAST 430 EK+ R ++ + ST Sbjct: 424 EEKEKKRRRLENIRFLKGMGYST 446 >AY129295-1|AAN01355.1| 601|Homo sapiens NEDD8 ultimate buster-1 protein. Length = 601 Score = 31.9 bits (69), Expect = 1.8 Identities = 20/83 (24%), Positives = 38/83 (45%), Gaps = 1/83 (1%) Frame = +2 Query: 185 DELKRALSSLNVTDRKIANVREC-LTAVFGCLQRRGCSGRMDRYKAHISLPQESIEQLQK 361 ++ ++ L + K+ N+ + TA L R C G +D HI+ +E + Q++K Sbjct: 364 NKARQLFKELYIDPSKVDNLLQLGFTAQEARLGLRACDGNVDHAATHITNRREELAQIRK 423 Query: 362 FYDEKRSSRKMKLQLSFDLXAST 430 EK+ R ++ + ST Sbjct: 424 EEKEKKRRRLENIRFLKGMGYST 446 >AF300717-1|AAK21001.1| 601|Homo sapiens NUB1 protein. Length = 601 Score = 31.9 bits (69), Expect = 1.8 Identities = 20/83 (24%), Positives = 38/83 (45%), Gaps = 1/83 (1%) Frame = +2 Query: 185 DELKRALSSLNVTDRKIANVREC-LTAVFGCLQRRGCSGRMDRYKAHISLPQESIEQLQK 361 ++ ++ L + K+ N+ + TA L R C G +D HI+ +E + Q++K Sbjct: 364 NKARQLFKELYIDPSKVDNLLQLGFTAQEARLGLRACDGNVDHAATHITNRREELAQIRK 423 Query: 362 FYDEKRSSRKMKLQLSFDLXAST 430 EK+ R ++ + ST Sbjct: 424 EEKEKKRRRLENIRFLKGMGYST 446 >AC005486-1|AAS02030.1| 601|Homo sapiens unknown protein. Length = 601 Score = 31.9 bits (69), Expect = 1.8 Identities = 20/83 (24%), Positives = 38/83 (45%), Gaps = 1/83 (1%) Frame = +2 Query: 185 DELKRALSSLNVTDRKIANVREC-LTAVFGCLQRRGCSGRMDRYKAHISLPQESIEQLQK 361 ++ ++ L + K+ N+ + TA L R C G +D HI+ +E + Q++K Sbjct: 364 NKARQLFKELYIDPSKVDNLLQLGFTAQEARLGLRACDGNVDHAATHITNRREELAQIRK 423 Query: 362 FYDEKRSSRKMKLQLSFDLXAST 430 EK+ R ++ + ST Sbjct: 424 EEKEKKRRRLENIRFLKGMGYST 446 >AK000283-1|BAA91052.1| 1084|Homo sapiens protein ( Homo sapiens cDNA FLJ20276 fis, clone HEP02437. ). Length = 1084 Score = 31.5 bits (68), Expect = 2.3 Identities = 22/94 (23%), Positives = 42/94 (44%) Frame = +2 Query: 275 LQRRGCSGRMDRYKAHISLPQESIEQLQKFYDEKRSSRKMKLQLSFDLXASTSDSFNDRA 454 +Q+ +D K HIS+ + +I++L + E+R + + ++ ST + Sbjct: 306 IQKMNLEEELDELKVHISIDKAAIQELNRCVAERREEQLFRSGEDDEVKRSTPEKNGKEM 365 Query: 455 ENGTPTFADELKIYLXSFHMDKNRKLVLENGEKL 556 T EL+ L SF +K + + E +KL Sbjct: 366 LEQTLQKVIELENRLKSF--EKRSRKLKEGNKKL 397 >BC086869-1|AAH86869.1| 954|Homo sapiens FLJ25770 protein protein. Length = 954 Score = 29.5 bits (63), Expect = 9.4 Identities = 25/104 (24%), Positives = 51/104 (49%) Frame = +2 Query: 113 KLTADKHATRRLIANVDKSIITKKDELKRALSSLNVTDRKIANVRECLTAVFGCLQRRGC 292 +L+ +K +RL + IT D L+R L + N+ +++ + + L + C Sbjct: 233 ELSLEKEQNKRLWDRDTGNSITI-DHLRRELDNRNMEVQRLEALLKAL--------KSEC 283 Query: 293 SGRMDRYKAHISLPQESIEQLQKFYDEKRSSRKMKLQLSFDLXA 424 G+M+R A I ES+E++ + S+++M ++ +L A Sbjct: 284 QGQMERQMAAIQGKNESLEKVSSLTAQLESTKEMLRKVVEELTA 327 >AK128533-1|BAC87485.1| 209|Homo sapiens protein ( Homo sapiens cDNA FLJ46691 fis, clone TRACH3012659, highly similar to Ig heavy chain V-III region VH26 precursor. ). Length = 209 Score = 29.5 bits (63), Expect = 9.4 Identities = 19/57 (33%), Positives = 26/57 (45%) Frame = -1 Query: 189 SSFFVIMLLSTLAISRRVACLSAVSLPTAAKGPARAFSSSSRIFKDSTRVCVRVLSH 19 +S + I L ST IS + V+ PT +GPA F S + D C+R H Sbjct: 140 NSTYPISLNSTYPISLMLPP-PTVTAPTGPRGPALRFRSEPHVHTDRPERCLRCHLH 195 >AK123542-1|BAC85640.1| 187|Homo sapiens protein ( Homo sapiens cDNA FLJ41548 fis, clone COLON1000030. ). Length = 187 Score = 29.5 bits (63), Expect = 9.4 Identities = 19/57 (33%), Positives = 26/57 (45%) Frame = -1 Query: 189 SSFFVIMLLSTLAISRRVACLSAVSLPTAAKGPARAFSSSSRIFKDSTRVCVRVLSH 19 +S + I L ST IS + V+ PT +GPA F S + D C+R H Sbjct: 118 NSTYPISLNSTYPISLMLPP-PTVTAPTGPRGPALRFRSEPHVHTDRPERCLRCHLH 173 Database: human Posted date: Oct 23, 2007 1:18 PM Number of letters in database: 76,859,062 Number of sequences in database: 237,096 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 68,661,041 Number of Sequences: 237096 Number of extensions: 1132218 Number of successful extensions: 3239 Number of sequences better than 10.0: 14 Number of HSP's better than 10.0 without gapping: 3141 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 3238 length of database: 76,859,062 effective HSP length: 87 effective length of database: 56,231,710 effective search space used: 6297951520 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
- SilkBase 1999-2023 -