Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brP-0595
(750 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF000263-15|AAG00018.1| 416|Caenorhabditis elegans Hypothetical... 35 0.054
Z71264-6|CAC35821.1| 374|Caenorhabditis elegans Hypothetical pr... 31 0.66
U53153-6|AAT81184.1| 638|Caenorhabditis elegans Germinal center... 31 0.66
U53153-5|AAK77641.1| 651|Caenorhabditis elegans Germinal center... 31 0.66
U53153-4|AAK77642.2| 650|Caenorhabditis elegans Germinal center... 31 0.66
U53153-3|AAC69038.1| 653|Caenorhabditis elegans Germinal center... 31 0.66
AL008986-1|CAC35820.1| 374|Caenorhabditis elegans Hypothetical ... 31 0.66
Z81113-2|CAB03279.1| 510|Caenorhabditis elegans Hypothetical pr... 30 2.0
Z49938-4|CAA90189.3| 2180|Caenorhabditis elegans Hypothetical pr... 30 2.0
Z46811-1|CAA86842.3| 2180|Caenorhabditis elegans Hypothetical pr... 30 2.0
AF316539-1|AAK01632.1| 2200|Caenorhabditis elegans PTP-3A protein. 30 2.0
U50301-9|AAB37047.1| 305|Caenorhabditis elegans Hypothetical pr... 29 4.7
AL023828-19|CAA19464.2| 293|Caenorhabditis elegans Hypothetical... 29 4.7
Z82074-1|CAB04928.2| 480|Caenorhabditis elegans Hypothetical pr... 28 6.2
AL132864-6|CAB63395.1| 480|Caenorhabditis elegans Hypothetical ... 28 6.2
U64862-5|AAQ91890.1| 2350|Caenorhabditis elegans Lin-5 (five) in... 28 8.1
U64862-4|AAZ32792.1| 2117|Caenorhabditis elegans Lin-5 (five) in... 28 8.1
U64862-3|AAM69078.1| 2396|Caenorhabditis elegans Lin-5 (five) in... 28 8.1
>AF000263-15|AAG00018.1| 416|Caenorhabditis elegans Hypothetical
protein T08B2.11 protein.
Length = 416
Score = 35.1 bits (77), Expect = 0.054
Identities = 29/140 (20%), Positives = 63/140 (45%), Gaps = 3/140 (2%)
Frame = +3
Query: 21 RELNTPNSRYSIDLCTPNSRLSKEINSPKSRLSLDLNNGQERYITQEYFGHSPKSRKMPN 200
++ +T + + +DL + S+ E K +L+ DL ++I + + KSRK +
Sbjct: 129 KKSSTESGKKQVDLNSDGSKEPPEEEKNKQKLNKDLAKHFFKHIQESH-----KSRKKAD 183
Query: 201 DKAIHTKGNMVQNKLSPQNRFTDFKKYSSTFDNIQSLIREGK---VEEAPPTECNETVNE 371
D+ I Q +S ++ +K T +++ G+ V + PP+EC + +
Sbjct: 184 DRRIEVMPESSQLNVSARSLRKKTQKKPKTVLDLEIFKPNGEPVWVTDKPPSECEKDEDG 243
Query: 372 LMTVPPNMVRVVSLPSLGPD 431
++ P + ++ +L D
Sbjct: 244 VIITNPELAAALAEDNLEMD 263
>Z71264-6|CAC35821.1| 374|Caenorhabditis elegans Hypothetical
protein K07G5.6 protein.
Length = 374
Score = 31.5 bits (68), Expect = 0.66
Identities = 18/54 (33%), Positives = 26/54 (48%)
Frame = +3
Query: 282 SSTFDNIQSLIREGKVEEAPPTECNETVNELMTVPPNMVRVVSLPSLGPDGESN 443
+S I+ GKV P T+ ET N L T+P + + + L PD ES+
Sbjct: 282 ASQVQKIRKTSESGKVAVVPITDVIETFNTLYTLPKKVEHLKNALVLRPDYESD 335
>U53153-6|AAT81184.1| 638|Caenorhabditis elegans Germinal center
kinase family protein1, isoform d protein.
Length = 638
Score = 31.5 bits (68), Expect = 0.66
Identities = 19/71 (26%), Positives = 34/71 (47%)
Frame = +3
Query: 165 FGHSPKSRKMPNDKAIHTKGNMVQNKLSPQNRFTDFKKYSSTFDNIQSLIREGKVEEAPP 344
+G P SR+ N KG + + L + + ++ D ++ + R+ VE++ P
Sbjct: 545 YGAPPPSREANNVPMPRVKGALDCSLLPAIEHLSRTRHATAALDQLRHVFRD--VEDSCP 602
Query: 345 TECNETVNELM 377
CNE + ELM
Sbjct: 603 GICNELIEELM 613
>U53153-5|AAK77641.1| 651|Caenorhabditis elegans Germinal center
kinase family protein1, isoform b protein.
Length = 651
Score = 31.5 bits (68), Expect = 0.66
Identities = 19/71 (26%), Positives = 34/71 (47%)
Frame = +3
Query: 165 FGHSPKSRKMPNDKAIHTKGNMVQNKLSPQNRFTDFKKYSSTFDNIQSLIREGKVEEAPP 344
+G P SR+ N KG + + L + + ++ D ++ + R+ VE++ P
Sbjct: 558 YGAPPPSREANNVPMPRVKGALDCSLLPAIEHLSRTRHATAALDQLRHVFRD--VEDSCP 615
Query: 345 TECNETVNELM 377
CNE + ELM
Sbjct: 616 GICNELIEELM 626
>U53153-4|AAK77642.2| 650|Caenorhabditis elegans Germinal center
kinase family protein1, isoform c protein.
Length = 650
Score = 31.5 bits (68), Expect = 0.66
Identities = 19/71 (26%), Positives = 34/71 (47%)
Frame = +3
Query: 165 FGHSPKSRKMPNDKAIHTKGNMVQNKLSPQNRFTDFKKYSSTFDNIQSLIREGKVEEAPP 344
+G P SR+ N KG + + L + + ++ D ++ + R+ VE++ P
Sbjct: 557 YGAPPPSREANNVPMPRVKGALDCSLLPAIEHLSRTRHATAALDQLRHVFRD--VEDSCP 614
Query: 345 TECNETVNELM 377
CNE + ELM
Sbjct: 615 GICNELIEELM 625
>U53153-3|AAC69038.1| 653|Caenorhabditis elegans Germinal center
kinase family protein1, isoform a protein.
Length = 653
Score = 31.5 bits (68), Expect = 0.66
Identities = 19/71 (26%), Positives = 34/71 (47%)
Frame = +3
Query: 165 FGHSPKSRKMPNDKAIHTKGNMVQNKLSPQNRFTDFKKYSSTFDNIQSLIREGKVEEAPP 344
+G P SR+ N KG + + L + + ++ D ++ + R+ VE++ P
Sbjct: 560 YGAPPPSREANNVPMPRVKGALDCSLLPAIEHLSRTRHATAALDQLRHVFRD--VEDSCP 617
Query: 345 TECNETVNELM 377
CNE + ELM
Sbjct: 618 GICNELIEELM 628
>AL008986-1|CAC35820.1| 374|Caenorhabditis elegans Hypothetical
protein K07G5.6 protein.
Length = 374
Score = 31.5 bits (68), Expect = 0.66
Identities = 18/54 (33%), Positives = 26/54 (48%)
Frame = +3
Query: 282 SSTFDNIQSLIREGKVEEAPPTECNETVNELMTVPPNMVRVVSLPSLGPDGESN 443
+S I+ GKV P T+ ET N L T+P + + + L PD ES+
Sbjct: 282 ASQVQKIRKTSESGKVAVVPITDVIETFNTLYTLPKKVEHLKNALVLRPDYESD 335
>Z81113-2|CAB03279.1| 510|Caenorhabditis elegans Hypothetical
protein T03F6.2 protein.
Length = 510
Score = 29.9 bits (64), Expect = 2.0
Identities = 15/50 (30%), Positives = 26/50 (52%)
Frame = +3
Query: 252 QNRFTDFKKYSSTFDNIQSLIREGKVEEAPPTECNETVNELMTVPPNMVR 401
+N+ D KK + FD ++ E +++EAPP E + E P +V+
Sbjct: 374 KNKRKDRKKGNGIFDVEETEAVEAEIQEAPPVENEQPEEEEKECTPEVVK 423
>Z49938-4|CAA90189.3| 2180|Caenorhabditis elegans Hypothetical
protein C09D8.1a protein.
Length = 2180
Score = 29.9 bits (64), Expect = 2.0
Identities = 26/84 (30%), Positives = 37/84 (44%)
Frame = +3
Query: 174 SPKSRKMPNDKAIHTKGNMVQNKLSPQNRFTDFKKYSSTFDNIQSLIREGKVEEAPPTEC 353
SP++R + D + G Q P T +K Y T D + + IRE K +A E
Sbjct: 442 SPQARSLNRDSILVKWGPCEQ----PNGLITGYKVYY-TNDLVTTPIREWKQHDAKSDEF 496
Query: 354 NETVNELMTVPPNMVRVVSLPSLG 425
T+N L VRV++ S G
Sbjct: 497 MTTINGLEPDSRYFVRVIAQNSEG 520
>Z46811-1|CAA86842.3| 2180|Caenorhabditis elegans Hypothetical
protein C09D8.1a protein.
Length = 2180
Score = 29.9 bits (64), Expect = 2.0
Identities = 26/84 (30%), Positives = 37/84 (44%)
Frame = +3
Query: 174 SPKSRKMPNDKAIHTKGNMVQNKLSPQNRFTDFKKYSSTFDNIQSLIREGKVEEAPPTEC 353
SP++R + D + G Q P T +K Y T D + + IRE K +A E
Sbjct: 442 SPQARSLNRDSILVKWGPCEQ----PNGLITGYKVYY-TNDLVTTPIREWKQHDAKSDEF 496
Query: 354 NETVNELMTVPPNMVRVVSLPSLG 425
T+N L VRV++ S G
Sbjct: 497 MTTINGLEPDSRYFVRVIAQNSEG 520
>AF316539-1|AAK01632.1| 2200|Caenorhabditis elegans PTP-3A protein.
Length = 2200
Score = 29.9 bits (64), Expect = 2.0
Identities = 26/84 (30%), Positives = 37/84 (44%)
Frame = +3
Query: 174 SPKSRKMPNDKAIHTKGNMVQNKLSPQNRFTDFKKYSSTFDNIQSLIREGKVEEAPPTEC 353
SP++R + D + G Q P T +K Y T D + + IRE K +A E
Sbjct: 442 SPQARSLNRDSILVKWGPCEQ----PNGLITGYKVYY-TNDLVTTPIREWKQHDAKSDEF 496
Query: 354 NETVNELMTVPPNMVRVVSLPSLG 425
T+N L VRV++ S G
Sbjct: 497 MTTINGLEPDSRYFVRVIAQNSEG 520
>U50301-9|AAB37047.1| 305|Caenorhabditis elegans Hypothetical
protein F20D6.2 protein.
Length = 305
Score = 28.7 bits (61), Expect = 4.7
Identities = 14/52 (26%), Positives = 26/52 (50%)
Frame = +3
Query: 81 LSKEINSPKSRLSLDLNNGQERYITQEYFGHSPKSRKMPNDKAIHTKGNMVQ 236
++ EI+ + L + NG+ R + YF S KSR + +H + ++ Q
Sbjct: 254 INSEIHPYFKHIRLFMVNGRNRECLKRYFLSSGKSRNTRKTREVHVEDHLFQ 305
>AL023828-19|CAA19464.2| 293|Caenorhabditis elegans Hypothetical
protein Y17G7B.17 protein.
Length = 293
Score = 28.7 bits (61), Expect = 4.7
Identities = 32/110 (29%), Positives = 46/110 (41%), Gaps = 2/110 (1%)
Frame = +3
Query: 168 GHSPKSRKMPNDKAIHTKGNMVQNKLSPQNRFTDFKKYSS-TFDN-IQSLIREGKVEEAP 341
GHS R DK +GN+ + Q RF + + S+ FD S +R+G +
Sbjct: 149 GHSIGDRSHFIDKKRDREGNVRK-----QQRFQNLDEASAEAFDREFSSRVRQGYGSGSR 203
Query: 342 PTECNETVNELMTVPPNMVRVVSLPSLGPDGESNSASRQALITTVXEEED 491
+ E N L + + S ES ASR A I T+ EEE+
Sbjct: 204 SSNLREIDNGLSSSRRSPFGGAGASSSSRRMESRGASRGAPIVTLPEEEE 253
>Z82074-1|CAB04928.2| 480|Caenorhabditis elegans Hypothetical
protein W06H12.1 protein.
Length = 480
Score = 28.3 bits (60), Expect = 6.2
Identities = 13/48 (27%), Positives = 26/48 (54%)
Frame = +3
Query: 354 NETVNELMTVPPNMVRVVSLPSLGPDGESNSASRQALITTVXEEEDQE 497
++ N+ M VP ++ V++ G +G SNS + + + EEE+ +
Sbjct: 151 DDETNQTMMVPTDVADVINAIVAGTNGSSNSNTTSSSKSPQEEEEEHD 198
>AL132864-6|CAB63395.1| 480|Caenorhabditis elegans Hypothetical
protein W06H12.1 protein.
Length = 480
Score = 28.3 bits (60), Expect = 6.2
Identities = 13/48 (27%), Positives = 26/48 (54%)
Frame = +3
Query: 354 NETVNELMTVPPNMVRVVSLPSLGPDGESNSASRQALITTVXEEEDQE 497
++ N+ M VP ++ V++ G +G SNS + + + EEE+ +
Sbjct: 151 DDETNQTMMVPTDVADVINAIVAGTNGSSNSNTTSSSKSPQEEEEEHD 198
>U64862-5|AAQ91890.1| 2350|Caenorhabditis elegans Lin-5 (five)
interacting proteinprotein 1, isoform d protein.
Length = 2350
Score = 27.9 bits (59), Expect = 8.1
Identities = 24/96 (25%), Positives = 43/96 (44%), Gaps = 11/96 (11%)
Frame = +3
Query: 45 RYSIDLCTPNSRLSKEINSPKSRLSLDLNNGQER--YITQEYFGHSPKSRKMPN------ 200
++ D T S +K + + + L L +R ++T+ H+ K R + +
Sbjct: 1234 KWKTDAYTVRSE-AKALETTNTALKAQLQAANDRIDHLTKTVNDHTSKVRDLTSQVRHLE 1292
Query: 201 DKAIHTKGNMVQNKL---SPQNRFTDFKKYSSTFDN 299
D+ TKGN+VQ ++ S QNR + ST +
Sbjct: 1293 DELADTKGNLVQKEMDLESTQNRLRSLEDQHSTLQS 1328
>U64862-4|AAZ32792.1| 2117|Caenorhabditis elegans Lin-5 (five)
interacting proteinprotein 1, isoform b protein.
Length = 2117
Score = 27.9 bits (59), Expect = 8.1
Identities = 24/96 (25%), Positives = 43/96 (44%), Gaps = 11/96 (11%)
Frame = +3
Query: 45 RYSIDLCTPNSRLSKEINSPKSRLSLDLNNGQER--YITQEYFGHSPKSRKMPN------ 200
++ D T S +K + + + L L +R ++T+ H+ K R + +
Sbjct: 1307 KWKTDAYTVRSE-AKALETTNTALKAQLQAANDRIDHLTKTVNDHTSKVRDLTSQVRHLE 1365
Query: 201 DKAIHTKGNMVQNKL---SPQNRFTDFKKYSSTFDN 299
D+ TKGN+VQ ++ S QNR + ST +
Sbjct: 1366 DELADTKGNLVQKEMDLESTQNRLRSLEDQHSTLQS 1401
>U64862-3|AAM69078.1| 2396|Caenorhabditis elegans Lin-5 (five)
interacting proteinprotein 1, isoform a protein.
Length = 2396
Score = 27.9 bits (59), Expect = 8.1
Identities = 24/96 (25%), Positives = 43/96 (44%), Gaps = 11/96 (11%)
Frame = +3
Query: 45 RYSIDLCTPNSRLSKEINSPKSRLSLDLNNGQER--YITQEYFGHSPKSRKMPN------ 200
++ D T S +K + + + L L +R ++T+ H+ K R + +
Sbjct: 1307 KWKTDAYTVRSE-AKALETTNTALKAQLQAANDRIDHLTKTVNDHTSKVRDLTSQVRHLE 1365
Query: 201 DKAIHTKGNMVQNKL---SPQNRFTDFKKYSSTFDN 299
D+ TKGN+VQ ++ S QNR + ST +
Sbjct: 1366 DELADTKGNLVQKEMDLESTQNRLRSLEDQHSTLQS 1401
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,647,247
Number of Sequences: 27780
Number of extensions: 357136
Number of successful extensions: 1009
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 981
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1009
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1777507862
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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