BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= brP-0595 (750 letters) Database: bee 438 sequences; 146,343 total letters Searching......................................................done Score E Sequences producing significant alignments: (bits) Value AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein pr... 24 1.3 AF388659-1|AAK71995.1| 782|Apis mellifera 1D-myo-inositol-trisp... 24 1.8 EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholi... 23 4.0 DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholi... 23 4.0 DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholi... 23 4.0 EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholi... 22 5.3 EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholi... 22 5.3 EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholi... 22 5.3 EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholi... 22 7.1 EF540769-1|ABQ14707.1| 620|Apis mellifera adenosine deaminase p... 21 9.3 DQ666693-1|ABG29167.1| 250|Apis mellifera MAX dimerization prot... 21 9.3 AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic ac... 21 9.3 >AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein protein. Length = 1308 Score = 24.2 bits (50), Expect = 1.3 Identities = 9/19 (47%), Positives = 13/19 (68%) Frame = +3 Query: 87 KEINSPKSRLSLDLNNGQE 143 KEI P + ++D+NNG E Sbjct: 367 KEITVPSNEETIDINNGAE 385 >AF388659-1|AAK71995.1| 782|Apis mellifera 1D-myo-inositol-trisphosphate 3-kinaseisoform A protein. Length = 782 Score = 23.8 bits (49), Expect = 1.8 Identities = 36/151 (23%), Positives = 65/151 (43%), Gaps = 16/151 (10%) Frame = +3 Query: 315 REGKVEE--APPTECNETVNELMTVPPNMVRVVSLPSLGPDG-ESNSASRQ-------AL 464 +E EE P E NET +E T+ +VR +S +G E++S R+ +L Sbjct: 159 KEQNAEEDIVDPVEENETYDEFDTIRIPIVRSLSKSPPNDEGIETDSDRRKGSIARCWSL 218 Query: 465 ITTVXEEEDQEXXXXXXXXXXXXLRKIENNISAILS-----QXRDQNHFNPYLQKDWNIX 629 +T +ED + + ++ SA+LS + D ++ + D N Sbjct: 219 DSTAASDEDISLTTHQQKRHKLRVTRCYSSDSAVLSDEDQTKGWDGSNMVEGNESDHNDG 278 Query: 630 XDEYWDEVPNDIIENNYRYS-SRERQKRHDI 719 YW P+ ++ + YS E+ +R+D+ Sbjct: 279 RLRYW-RTPSVVVSDYSDYSYLDEKLERNDL 308 >EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholine receptor subunitalpha 6 transcript variant 1 protein. Length = 461 Score = 22.6 bits (46), Expect = 4.0 Identities = 9/27 (33%), Positives = 14/27 (51%) Frame = -3 Query: 667 IISLGTSSQYSSLXIFQSFCKYGLKWF 587 +++ S Y IF+S CK + WF Sbjct: 92 VVTHNGSCLYVPPGIFKSTCKIDITWF 118 >DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholine receptor alpha6subunit protein. Length = 529 Score = 22.6 bits (46), Expect = 4.0 Identities = 9/27 (33%), Positives = 14/27 (51%) Frame = -3 Query: 667 IISLGTSSQYSSLXIFQSFCKYGLKWF 587 +++ S Y IF+S CK + WF Sbjct: 160 VVTHNGSCLYVPPGIFKSTCKIDITWF 186 >DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholine receptor alpha6subunit protein. Length = 529 Score = 22.6 bits (46), Expect = 4.0 Identities = 9/27 (33%), Positives = 14/27 (51%) Frame = -3 Query: 667 IISLGTSSQYSSLXIFQSFCKYGLKWF 587 +++ S Y IF+S CK + WF Sbjct: 160 VVTHNGSCLYVPPGIFKSTCKIDITWF 186 >EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholine receptor subunitalpha 6 transcript variant 5 protein. Length = 461 Score = 22.2 bits (45), Expect = 5.3 Identities = 9/27 (33%), Positives = 14/27 (51%) Frame = -3 Query: 667 IISLGTSSQYSSLXIFQSFCKYGLKWF 587 +++ S Y IF+S CK + WF Sbjct: 92 VVTHDGSCLYVPPGIFKSTCKIDIAWF 118 >EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholine receptor subunitalpha 6 transcript variant 4 protein. Length = 461 Score = 22.2 bits (45), Expect = 5.3 Identities = 9/27 (33%), Positives = 14/27 (51%) Frame = -3 Query: 667 IISLGTSSQYSSLXIFQSFCKYGLKWF 587 +++ S Y IF+S CK + WF Sbjct: 92 VVTHDGSCLYVPPGIFKSTCKIDITWF 118 >EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholine receptor subunitalpha 6 transcript variant 2 protein. Length = 461 Score = 22.2 bits (45), Expect = 5.3 Identities = 9/27 (33%), Positives = 14/27 (51%) Frame = -3 Query: 667 IISLGTSSQYSSLXIFQSFCKYGLKWF 587 +++ S Y IF+S CK + WF Sbjct: 92 VVTHDGSCLYVPPGIFKSTCKMDIAWF 118 >EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholine receptor subunitalpha 6 transcript variant 6 protein. Length = 461 Score = 21.8 bits (44), Expect = 7.1 Identities = 9/27 (33%), Positives = 14/27 (51%) Frame = -3 Query: 667 IISLGTSSQYSSLXIFQSFCKYGLKWF 587 +++ S Y IF+S CK + WF Sbjct: 92 VVTHDGSCLYVPPGIFKSTCKMDVAWF 118 >EF540769-1|ABQ14707.1| 620|Apis mellifera adenosine deaminase protein. Length = 620 Score = 21.4 bits (43), Expect = 9.3 Identities = 13/44 (29%), Positives = 20/44 (45%) Frame = +3 Query: 30 NTPNSRYSIDLCTPNSRLSKEINSPKSRLSLDLNNGQERYITQE 161 NTP +I+ C P+ L + S + L N + +TQE Sbjct: 102 NTPEVHQAINTCQPSIPLEPDFTSDVTERDNHLVNA-FKTLTQE 144 >DQ666693-1|ABG29167.1| 250|Apis mellifera MAX dimerization protein protein. Length = 250 Score = 21.4 bits (43), Expect = 9.3 Identities = 9/18 (50%), Positives = 11/18 (61%) Frame = -3 Query: 442 LLSPSGPRLGRETTLTIL 389 +L P GP R TTL +L Sbjct: 73 VLVPLGPETSRHTTLGLL 90 >AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic acetylcholine receptoralpha7-1 protein. Length = 555 Score = 21.4 bits (43), Expect = 9.3 Identities = 7/13 (53%), Positives = 9/13 (69%) Frame = -3 Query: 625 IFQSFCKYGLKWF 587 IF+S CK + WF Sbjct: 143 IFKSTCKIDITWF 155 Database: bee Posted date: Oct 23, 2007 1:17 PM Number of letters in database: 146,343 Number of sequences in database: 438 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 207,006 Number of Sequences: 438 Number of extensions: 4608 Number of successful extensions: 15 Number of sequences better than 10.0: 12 Number of HSP's better than 10.0 without gapping: 15 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 15 length of database: 146,343 effective HSP length: 56 effective length of database: 121,815 effective search space used: 23510295 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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