Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brP-0593
         (600 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292359-1|CAL23171.2|  436|Tribolium castaneum gustatory recept...    23   2.6  
AM292360-1|CAL23172.2|  427|Tribolium castaneum gustatory recept...    21   6.0  
AM292331-1|CAL23143.2|  437|Tribolium castaneum gustatory recept...    21   6.0  
AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory recept...    21   7.9  

>AM292359-1|CAL23171.2|  436|Tribolium castaneum gustatory receptor
           candidate 38 protein.
          Length = 436

 Score = 22.6 bits (46), Expect = 2.6
 Identities = 10/33 (30%), Positives = 18/33 (54%)
 Frame = +2

Query: 71  LGFGFKVF*LWLNSIGTIIWRQANLLQCQKNYF 169
           LG+   VF + +  IG I W +  +++ Q+  F
Sbjct: 94  LGYSVVVFVVVMGYIGFIEWDKVEIVRSQEGRF 126


>AM292360-1|CAL23172.2|  427|Tribolium castaneum gustatory receptor
           candidate 39 protein.
          Length = 427

 Score = 21.4 bits (43), Expect = 6.0
 Identities = 7/15 (46%), Positives = 10/15 (66%)
 Frame = +1

Query: 298 KFIGAESDFWCDISN 342
           K +GA  D W D+S+
Sbjct: 254 KILGAYRDLWVDLSH 268


>AM292331-1|CAL23143.2|  437|Tribolium castaneum gustatory receptor
           candidate 10 protein.
          Length = 437

 Score = 21.4 bits (43), Expect = 6.0
 Identities = 7/15 (46%), Positives = 10/15 (66%)
 Frame = +1

Query: 298 KFIGAESDFWCDISN 342
           K +GA  D W D+S+
Sbjct: 254 KILGAYRDLWVDLSH 268


>AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory receptor
           candidate 51 protein.
          Length = 771

 Score = 21.0 bits (42), Expect = 7.9
 Identities = 6/11 (54%), Positives = 9/11 (81%)
 Frame = -1

Query: 351 NFCIGYITPEI 319
           NFC G+IT ++
Sbjct: 528 NFCFGFITKQL 538


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 150,316
Number of Sequences: 336
Number of extensions: 3400
Number of successful extensions: 5
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 15143945
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)