SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brP-0591
         (700 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

03_02_0554 - 9426195-9426674,9427163-9427252,9428143-9428934          134   6e-32
10_08_1021 - 22315487-22315493,22317051-22317154,22317227-223173...   116   1e-26
03_06_0726 - 35761959-35762063,35762232-35762336,35762543-357626...   113   2e-25
06_03_0723 + 23875008-23875204,23875311-23875576,23877166-238772...    95   4e-20
02_01_0739 + 5505630-5505654,5505965-5506049,5506444-5506519,550...    91   8e-19
07_03_0910 - 22519006-22519159,22519300-22519355,22519433-225197...    91   1e-18
01_07_0189 + 41875088-41875149,41875322-41875392,41875809-418759...    88   7e-18
09_04_0694 - 19529084-19529201,19529464-19529544,19529637-195301...    75   4e-14
02_05_0042 + 25351648-25351724,25351983-25352010,25352311-253523...    74   1e-13
08_02_1409 - 26864544-26864658,26864787-26864916,26864953-268652...    68   6e-12
03_02_0844 + 11695159-11695263,11695402-11695463,11695789-116958...    68   6e-12
05_06_0203 + 26348360-26348458,26349584-26349645,26349808-263498...    66   3e-11
01_06_1112 + 34606171-34606266,34607170-34607231,34607932-346080...    65   4e-11
01_06_1618 - 38681729-38683989,38685577-38685796                       42   6e-04
02_05_0566 - 30017031-30017309,30018077-30018172,30018261-300183...    34   0.094
10_08_0738 - 20212220-20212282,20212387-20212593,20212690-202128...    29   3.5  
01_05_0514 - 22876264-22878567                                         29   3.5  
12_01_0093 + 732276-732619,732722-732731                               29   4.7  
11_02_0138 - 8708483-8709033,8709163-8709265,8709312-8709359,871...    29   4.7  
03_04_0143 + 17670103-17670430,17670511-17670785,17670897-176713...    29   4.7  
11_03_0150 + 10810322-10810380,10810530-10810593,10810803-108110...    28   6.2  
04_03_0737 - 19152942-19154930                                         28   6.2  
06_02_0193 - 12874300-12874863                                         28   8.2  
02_02_0704 + 13095449-13095584,13095671-13095990,13096102-130964...    28   8.2  
01_01_0432 - 3276305-3276356,3276687-3276805                           28   8.2  

>03_02_0554 - 9426195-9426674,9427163-9427252,9428143-9428934
          Length = 453

 Score =  134 bits (324), Expect = 6e-32
 Identities = 61/126 (48%), Positives = 79/126 (62%)
 Frame = +2

Query: 92  RKLNSIRNLDENHKCFECGTLNPQWVSVTYGVWICLECSGVHRSLGVHLSFVRSVTMDKW 271
           R+L  ++    N  C +C   NPQW SV+YGV++CLECSG HR LGVH+SFVRSVTMD W
Sbjct: 7   RRLRELQGQAGNKTCVDCAQRNPQWASVSYGVFMCLECSGKHRGLGVHISFVRSVTMDSW 66

Query: 272 KDVELEKMMVGGNAKAREFFESQPDISSGMTIPQKYNTKAAAMYRQKIAALAEGRPWSPS 451
            + +L KM  GGN +   F  ++  +        KYN+ AAA YR +I A+AEGRPW+  
Sbjct: 67  TEAQLRKMEAGGNDRLNAFLAAR-GVPKETPHVAKYNSNAAAAYRDRIVAVAEGRPWTDP 125

Query: 452 DYKPET 469
               ET
Sbjct: 126 PVVKET 131


>10_08_1021 -
           22315487-22315493,22317051-22317154,22317227-22317328,
           22317623-22317745,22318038-22318094,22318498-22318758,
           22318948-22319377,22320168-22320286,22320515-22320595
          Length = 427

 Score =  116 bits (280), Expect = 1e-26
 Identities = 51/104 (49%), Positives = 71/104 (68%)
 Frame = +2

Query: 107 IRNLDENHKCFECGTLNPQWVSVTYGVWICLECSGVHRSLGVHLSFVRSVTMDKWKDVEL 286
           +R   +N  CF+C   NP W SVTYGV++C++CS VHRSLGVH+SFVRS  +D W   +L
Sbjct: 20  LRAKSDNKMCFDCNAKNPTWASVTYGVFLCIDCSAVHRSLGVHVSFVRSTNLDSWTPEQL 79

Query: 287 EKMMVGGNAKAREFFESQPDISSGMTIPQKYNTKAAAMYRQKIA 418
           + M+ GGN +A+ FF+ Q   + G  I  KY ++AA +YRQ +A
Sbjct: 80  KMMVYGGNNRAQAFFK-QHGWTDGGKIEAKYTSRAADLYRQLLA 122


>03_06_0726 -
           35761959-35762063,35762232-35762336,35762543-35762665,
           35763056-35763316,35763449-35763905,35764637-35764755,
           35764851-35764919
          Length = 412

 Score =  113 bits (271), Expect = 2e-25
 Identities = 48/96 (50%), Positives = 65/96 (67%)
 Frame = +2

Query: 122 ENHKCFECGTLNPQWVSVTYGVWICLECSGVHRSLGVHLSFVRSVTMDKWKDVELEKMMV 301
           EN  CF+C   NP W SVTYG+++CL+CS VHRSLGVH++FVRS  +D W   +L+ M  
Sbjct: 21  ENKMCFDCSAKNPTWASVTYGIFLCLDCSAVHRSLGVHITFVRSTNLDSWTPDQLKMMAF 80

Query: 302 GGNAKAREFFESQPDISSGMTIPQKYNTKAAAMYRQ 409
           GGN +A  FF+ Q   + G  +  KY ++AA +YRQ
Sbjct: 81  GGNNRAHAFFK-QHGWTDGGKVDAKYTSRAAELYRQ 115


>06_03_0723 + 23875008-23875204,23875311-23875576,23877166-23877274,
            23877577-23878212,23878328-23878573,23878669-23878834,
            23878863-23879076,23879580-23880097,23880617-23880683,
            23882131-23882215,23882292-23882367,23882593-23882756,
            23883088-23883217,23883314-23883430,23883505-23883600,
            23883732-23884009,23886571-23886794,23886935-23887011,
            23887103-23887145,23887231-23887288,23888371-23888410,
            23888891-23889418
          Length = 1444

 Score = 95.5 bits (227), Expect = 4e-20
 Identities = 47/111 (42%), Positives = 68/111 (61%), Gaps = 1/111 (0%)
 Frame = +2

Query: 8    EFGTRLVKSF*KDFPLSLIDKMASPRTKRKLNSIRNLDENHKCFECGTLNPQWVSVTYGV 187
            E+      S+  +  +SL DKM      RKL  + +  EN  C +C + +P+W S   GV
Sbjct: 788  EYSNSYQISYVYESSMSLTDKM------RKLKELLHKSENRICADCSSPDPKWASANIGV 841

Query: 188  WICLECSGVHRSLGVHLSFVRSVTMDKWKDVELEKMM-VGGNAKAREFFES 337
            +ICL+CSG+HRSLG H+S V SVT+D+W D E+  M+ VGGN+ A   +E+
Sbjct: 842  FICLKCSGIHRSLGTHISKVLSVTLDEWTDDEINSMLEVGGNSYANAIYEA 892


>02_01_0739 +
           5505630-5505654,5505965-5506049,5506444-5506519,
           5506694-5506857,5506878-5506935,5507283-5507399,
           5507543-5507638,5507905-5508186
          Length = 300

 Score = 91.1 bits (216), Expect = 8e-19
 Identities = 39/82 (47%), Positives = 56/82 (68%), Gaps = 1/82 (1%)
 Frame = +2

Query: 95  KLNSIRNLDENHKCFECGTLNPQWVSVTYGVWICLECSGVHRSLGVHLSFVRSVTMDKWK 274
           KL  + +  EN  C +C   +P+W S   GV+ICL+CSGVHRSLG H+S V SVT+D+W 
Sbjct: 13  KLKELLHRSENRICADCSAPDPKWASANIGVFICLKCSGVHRSLGTHISKVLSVTLDQWS 72

Query: 275 DVELEKMM-VGGNAKAREFFES 337
           D E++ ++ VGGN+ A   +E+
Sbjct: 73  DNEIDNVIEVGGNSHANAIYET 94


>07_03_0910 -
           22519006-22519159,22519300-22519355,22519433-22519702,
           22519808-22519986,22520146-22520374,22520985-22521180,
           22521728-22521818,22521921-22521975,22522812-22522902,
           22523366-22523424,22524000-22524050
          Length = 476

 Score = 90.6 bits (215), Expect = 1e-18
 Identities = 36/93 (38%), Positives = 60/93 (64%)
 Frame = +2

Query: 62  IDKMASPRTKRKLNSIRNLDENHKCFECGTLNPQWVSVTYGVWICLECSGVHRSLGVHLS 241
           + K  + + K+ L  +  L EN +C +C +  P+W SV  G++IC++CSG+HRSLGVH+S
Sbjct: 7   VSKELNAKHKKILEGLLRLPENRECADCKSKGPRWASVNLGIFICMQCSGIHRSLGVHIS 66

Query: 242 FVRSVTMDKWKDVELEKMMVGGNAKAREFFESQ 340
            VRS T+D W   ++  +   GN K+  ++E++
Sbjct: 67  KVRSATLDTWLPEQVAFIQSMGNEKSNSYWEAE 99


>01_07_0189 +
           41875088-41875149,41875322-41875392,41875809-41875902,
           41876285-41876360,41877130-41877293,41877428-41877605,
           41877687-41877809,41877895-41877990,41878091-41878372
          Length = 381

 Score = 87.8 bits (208), Expect = 7e-18
 Identities = 38/85 (44%), Positives = 57/85 (67%), Gaps = 1/85 (1%)
 Frame = +2

Query: 86  TKRKLNSIRNLDENHKCFECGTLNPQWVSVTYGVWICLECSGVHRSLGVHLSFVRSVTMD 265
           T  +L  + N   N  C +CG  +P+WVS+T+GV+IC++CSG HRSLGVH+S V SV +D
Sbjct: 49  TAERLEHLLNQPANKICADCGAPDPKWVSLTFGVFICIKCSGAHRSLGVHISKVVSVKLD 108

Query: 266 KWKDVELEKMM-VGGNAKAREFFES 337
           +W D +++ +   GGNA     +E+
Sbjct: 109 EWTDEQVDILADSGGNAAVNMIYEA 133


>09_04_0694 -
           19529084-19529201,19529464-19529544,19529637-19530136,
           19530444-19530540,19530633-19530775,19531187-19531528,
           19531810-19532031,19532292-19532330,19532386-19532601,
           19533101-19533196,19533416-19533481,19533777-19533821,
           19533903-19533965,19534274-19534344,19534599-19534699,
           19534896-19534972,19535856-19535900
          Length = 773

 Score = 75.4 bits (177), Expect = 4e-14
 Identities = 35/97 (36%), Positives = 55/97 (56%), Gaps = 2/97 (2%)
 Frame = +2

Query: 77  SPRTKRKLNSIRNLDENHKCFECGTLNPQWVSVTYGVWICLECSGVHRSLGVHLSFVRSV 256
           S +  + ++ +R +  N+ C +CG   P W S+  G+ +C+ECSGVHR+LGVH+S VRS+
Sbjct: 406 SMKPDKPIDLLRKVVGNNICADCGAAEPDWASLNLGILLCIECSGVHRNLGVHISKVRSL 465

Query: 257 TMD--KWKDVELEKMMVGGNAKAREFFESQPDISSGM 361
           T+D   W+   +      GN  A   +E     SS +
Sbjct: 466 TLDVRVWEPSVINLFQSLGNTFANTIWEDMLPSSSSV 502


>02_05_0042 +
           25351648-25351724,25351983-25352010,25352311-25352373,
           25352880-25352945,25353029-25353076,25353338-25353379,
           25353499-25353714,25354066-25354188,25354352-25354564,
           25354930-25355016,25355259-25355507,25356386-25356507,
           25357135-25357225,25358467-25358882,25359489-25359609
          Length = 653

 Score = 74.1 bits (174), Expect = 1e-13
 Identities = 33/81 (40%), Positives = 49/81 (60%), Gaps = 2/81 (2%)
 Frame = +2

Query: 101 NSIRNLDENHKCFECGTLNPQWVSVTYGVWICLECSGVHRSLGVHLSFVRSVTMD--KWK 274
           N +RN+  N  C EC + +P W S+  G+ IC+ECSG HR+LGVH+S VRS+ +D   W+
Sbjct: 357 NHLRNIPGNDSCAECRSPDPDWASLNLGILICIECSGAHRNLGVHISKVRSLRLDVKVWE 416

Query: 275 DVELEKMMVGGNAKAREFFES 337
            V ++     GN      +E+
Sbjct: 417 PVIMDLFHELGNDYTNSIWEA 437


>08_02_1409 -
           26864544-26864658,26864787-26864916,26864953-26865283,
           26866507-26866626,26867489-26867821,26867915-26868001,
           26868093-26868320,26868434-26868565,26868649-26868861,
           26869376-26869417,26869829-26869894,26870230-26870274,
           26870367-26870429,26870757-26870827,26871149-26871249,
           26871458-26871534,26872415-26872459
          Length = 732

 Score = 68.1 bits (159), Expect = 6e-12
 Identities = 25/60 (41%), Positives = 42/60 (70%)
 Frame = +2

Query: 83  RTKRKLNSIRNLDENHKCFECGTLNPQWVSVTYGVWICLECSGVHRSLGVHLSFVRSVTM 262
           + ++ ++ +R +D N  C +CG++ P W S+  G  +C+ECSGVHR+LGVH+S + S T+
Sbjct: 448 KPEKPIDLLRKVDGNIICVDCGSMEPDWASLNLGALLCIECSGVHRNLGVHISKLISTTL 507


>03_02_0844 +
           11695159-11695263,11695402-11695463,11695789-11695876,
           11695958-11696019,11696250-11696346,11696592-11696984,
           11697072-11697611,11697856-11697966,11698102-11698242,
           11698290-11698394,11698480-11698557,11699346-11699472,
           11699580-11699625,11699709-11699754
          Length = 666

 Score = 68.1 bits (159), Expect = 6e-12
 Identities = 34/100 (34%), Positives = 54/100 (54%)
 Frame = +2

Query: 83  RTKRKLNSIRNLDENHKCFECGTLNPQWVSVTYGVWICLECSGVHRSLGVHLSFVRSVTM 262
           R +R +  +  L  N +C  C  L PQ+V  ++  ++C+ CSG+HR    H   V+SV+M
Sbjct: 12  RNERVVRGLLKLPPNRRCINCNGLGPQYVCTSFWTFVCISCSGIHREF-THR--VKSVSM 68

Query: 263 DKWKDVELEKMMVGGNAKAREFFESQPDISSGMTIPQKYN 382
             +   E+E +  GGN +ARE F  + D +  M +P   N
Sbjct: 69  STFTTQEVEALQNGGNQRARESFLKEFD-AQKMRLPDSSN 107


>05_06_0203 +
           26348360-26348458,26349584-26349645,26349808-26349895,
           26349985-26350085,26350130-26350223,26350323-26350730,
           26351090-26351521,26351612-26351755,26351824-26351940,
           26352842-26352949
          Length = 550

 Score = 65.7 bits (153), Expect = 3e-11
 Identities = 29/96 (30%), Positives = 52/96 (54%)
 Frame = +2

Query: 83  RTKRKLNSIRNLDENHKCFECGTLNPQWVSVTYGVWICLECSGVHRSLGVHLSFVRSVTM 262
           R +R + ++  L  N +C  C +L PQ+V  ++  ++C+ CSG+HR    H   V+S++M
Sbjct: 10  RNERAIRALLKLPGNRRCINCNSLGPQYVCTSFSTFVCVSCSGIHREF-THR--VKSISM 66

Query: 263 DKWKDVELEKMMVGGNAKAREFFESQPDISSGMTIP 370
            K+   E+  +  GGN + +E +    D   G  +P
Sbjct: 67  AKFTSQEVSALQEGGNERGKEIYLKHWDF-QGQPLP 101


>01_06_1112 +
           34606171-34606266,34607170-34607231,34607932-34608019,
           34608104-34608165,34608246-34608342,34608499-34608930,
           34609042-34610061,34610151-34610282,34610354-34610470,
           34610982-34611062,34611321-34611447,34611547-34611592,
           34611663-34611708
          Length = 801

 Score = 65.3 bits (152), Expect = 4e-11
 Identities = 33/100 (33%), Positives = 52/100 (52%)
 Frame = +2

Query: 83  RTKRKLNSIRNLDENHKCFECGTLNPQWVSVTYGVWICLECSGVHRSLGVHLSFVRSVTM 262
           R ++ +  +  L  N KC  C ++ PQ+V   +  +ICL CSG+HR    H   V+SV+M
Sbjct: 9   RNEKIIRGLMKLPPNRKCINCNSVGPQYVCTNFWTFICLSCSGIHREF-THR--VKSVSM 65

Query: 263 DKWKDVELEKMMVGGNAKAREFFESQPDISSGMTIPQKYN 382
            K+   E+  +  GGN +AR+ +    D    M +P   N
Sbjct: 66  AKFTTQEVRSLEQGGNQRARDIYLKDWDWQR-MRLPDNSN 104


>01_06_1618 - 38681729-38683989,38685577-38685796
          Length = 826

 Score = 41.5 bits (93), Expect = 6e-04
 Identities = 21/42 (50%), Positives = 30/42 (71%)
 Frame = -1

Query: 631 GSRVRLLWGVTEAGVAAASILAVVANVVIRSACRQRVVRRVE 506
           G+  +L+ G+  AGVAAA ILAVV  V++R + R + +RRVE
Sbjct: 465 GNTKKLIIGLVVAGVAAAVILAVVVTVLVRRSRRLKALRRVE 506


>02_05_0566 -
           30017031-30017309,30018077-30018172,30018261-30018377,
           30018538-30018667,30018866-30019029,30019480-30019485
          Length = 263

 Score = 34.3 bits (75), Expect = 0.094
 Identities = 14/32 (43%), Positives = 22/32 (68%), Gaps = 1/32 (3%)
 Frame = +2

Query: 245 VRSVTMDKWKDVELEKMM-VGGNAKAREFFES 337
           V SVT+D W D +++ M+ +GGN+ A   +ES
Sbjct: 3   VLSVTLDDWSDSDIDSMLEIGGNSYANSIYES 34


>10_08_0738 -
           20212220-20212282,20212387-20212593,20212690-20212819,
           20212919-20213089,20213311-20213433,20213517-20213618,
           20214123-20214880
          Length = 517

 Score = 29.1 bits (62), Expect = 3.5
 Identities = 14/35 (40%), Positives = 21/35 (60%)
 Frame = -1

Query: 613 LWGVTEAGVAAASILAVVANVVIRSACRQRVVRRV 509
           LW +  AG AAA +LA++  V +   CR+R   R+
Sbjct: 74  LWVLVAAGAAAAVVLALLIVVCLCRRCRRRRCSRL 108


>01_05_0514 - 22876264-22878567
          Length = 767

 Score = 29.1 bits (62), Expect = 3.5
 Identities = 15/43 (34%), Positives = 28/43 (65%), Gaps = 1/43 (2%)
 Frame = -1

Query: 631 GSRVRLLWGVTEAGVAAASI-LAVVANVVIRSACRQRVVRRVE 506
           G+  ++  G+  AGV AA++ LAV+  V++  + R + +RR+E
Sbjct: 387 GNTKKMTIGLVVAGVVAAAVTLAVLVAVLVMRSRRAKALRRLE 429


>12_01_0093 + 732276-732619,732722-732731
          Length = 117

 Score = 28.7 bits (61), Expect = 4.7
 Identities = 17/52 (32%), Positives = 26/52 (50%)
 Frame = -3

Query: 533 SAACCPKSRNRETGATXEASRSSRACNPMDSMGGPQLKPRSFGGTSQRPWYC 378
           SAACC   R+  + AT  A R + ACN + ++ G  +   + G  +  P  C
Sbjct: 50  SAACCSGVRSLNSAATTTADRRT-ACNCLKNVAG-SISGLNAGNAASIPSKC 99


>11_02_0138 -
           8708483-8709033,8709163-8709265,8709312-8709359,
           8713887-8714359,8716353-8716508,8716572-8716617,
           8716657-8716713
          Length = 477

 Score = 28.7 bits (61), Expect = 4.7
 Identities = 15/61 (24%), Positives = 25/61 (40%)
 Frame = +2

Query: 431 GRPWSPSDYKPETIEKPXEWLQSRDFYSSDNTLPTSGSDNNISYHSEYGSGRYTGFGNSP 610
           G  W   D+    +E   E+L  RDF      + ++ + + +   S YG       G +P
Sbjct: 128 GARWYADDFNKSQLEAAGEFLSPRDFDGHGTHVASTAAGSVVRNVSFYGLASGIAQGGAP 187

Query: 611 K 613
           K
Sbjct: 188 K 188


>03_04_0143 +
           17670103-17670430,17670511-17670785,17670897-17671376,
           17671454-17671849,17673215-17673289,17673939-17673960,
           17674041-17674129,17675204-17675495,17676019-17676087,
           17676394-17676572
          Length = 734

 Score = 28.7 bits (61), Expect = 4.7
 Identities = 14/45 (31%), Positives = 24/45 (53%)
 Frame = +2

Query: 170 SVTYGVWICLECSGVHRSLGVHLSFVRSVTMDKWKDVELEKMMVG 304
           S ++ +WIC   SGV +   +H  +V  V  D  + +++ KM  G
Sbjct: 591 SSSHNLWICFHQSGVVKP-SIHCFYVLVVLFDTRRRIQMMKMRRG 634


>11_03_0150 +
           10810322-10810380,10810530-10810593,10810803-10811047,
           10811627-10811747,10811821-10811895,10811986-10812112,
           10812194-10812939,10813065-10813195,10813547-10813636,
           10814000-10814105
          Length = 587

 Score = 28.3 bits (60), Expect = 6.2
 Identities = 16/32 (50%), Positives = 18/32 (56%)
 Frame = -3

Query: 362 SSQN*CPVDSRRTRGPSRCLRPSFSQVPRPST 267
           SSQN     S R R PS+  RP  SQ  RPS+
Sbjct: 416 SSQNERLESSERQRPPSQSYRPQSSQGQRPSS 447


>04_03_0737 - 19152942-19154930
          Length = 662

 Score = 28.3 bits (60), Expect = 6.2
 Identities = 14/32 (43%), Positives = 20/32 (62%), Gaps = 1/32 (3%)
 Frame = +3

Query: 555 LATT-ASMEAAATPASVTPQSNRTRLPMSPMH 647
           +ATT AS+ AAA  A+  P+    R P +P+H
Sbjct: 1   MATTPASLAAAAAAATAAPEPRGIRPPRAPVH 32


>06_02_0193 - 12874300-12874863
          Length = 187

 Score = 27.9 bits (59), Expect = 8.2
 Identities = 15/32 (46%), Positives = 21/32 (65%), Gaps = 4/32 (12%)
 Frame = +2

Query: 185 VWICLECSGVHR---SLGVHL-SFVRSVTMDK 268
           V+IC+ECS VHR   ++  H  S +RS  M+K
Sbjct: 42  VYICVECSEVHRNQQTMAAHCRSHIRSDGMEK 73


>02_02_0704 +
           13095449-13095584,13095671-13095990,13096102-13096423,
           13096556-13096632,13096744-13097127
          Length = 412

 Score = 27.9 bits (59), Expect = 8.2
 Identities = 18/66 (27%), Positives = 31/66 (46%)
 Frame = +2

Query: 323 EFFESQPDISSGMTIPQKYNTKAAAMYRQKIAALAEGRPWSPSDYKPETIEKPXEWLQSR 502
           EF   +P +S   +  +  +  AA   +++ A  +E R  SP    PE  +   +WLQS 
Sbjct: 74  EFIPLKPSLSLSSSEEESTHADAAKSGKKEEAETSE-RHSSPPPPPPEAKKVTPDWLQSV 132

Query: 503 DFYSSD 520
             +S +
Sbjct: 133 QLWSQE 138


>01_01_0432 - 3276305-3276356,3276687-3276805
          Length = 56

 Score = 27.9 bits (59), Expect = 8.2
 Identities = 12/33 (36%), Positives = 22/33 (66%)
 Frame = -1

Query: 433 ALS*SRDLLAVHRSGLGIVLLWYSHPRTDVRLT 335
           A+  S+++ AVH   +G+V+L Y H   ++RL+
Sbjct: 2   AMDMSKEMRAVHPIAIGLVVLSYHHVFEEMRLS 34


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,681,255
Number of Sequences: 37544
Number of extensions: 472474
Number of successful extensions: 1627
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 1561
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1621
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1792053856
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

- SilkBase 1999-2023 -