Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brP-0590
         (650 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    23   2.2  
AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory recept...    22   5.0  
DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome ad...    21   6.7  
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    21   8.8  
AM292324-1|CAL23136.1|  398|Tribolium castaneum gustatory recept...    21   8.8  

>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 23.0 bits (47), Expect = 2.2
 Identities = 9/25 (36%), Positives = 13/25 (52%)
 Frame = -1

Query: 623 CYTLNNIYCSYNILFPCTLFLLFIM 549
           CY L  IY  Y +     + LLF++
Sbjct: 50  CYNLRRIYYFYCVSITFNVHLLFLL 74



 Score = 21.0 bits (42), Expect = 8.8
 Identities = 10/22 (45%), Positives = 12/22 (54%)
 Frame = -1

Query: 602 YCSYNILFPCTLFLLFIMIFSC 537
           YC++ I     LFLL I  F C
Sbjct: 150 YCAFIIFTVHLLFLLCIYHFFC 171


>AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory receptor
           candidate 61 protein.
          Length = 670

 Score = 21.8 bits (44), Expect = 5.0
 Identities = 7/19 (36%), Positives = 14/19 (73%)
 Frame = -1

Query: 608 NIYCSYNILFPCTLFLLFI 552
           N YC++ ILF  ++F++ +
Sbjct: 319 NKYCNFIILFYLSVFVILV 337


>DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome
           adhesion molecule splicevariant 3.12.3.1 protein.
          Length = 1639

 Score = 21.4 bits (43), Expect = 6.7
 Identities = 7/11 (63%), Positives = 9/11 (81%)
 Frame = -2

Query: 49  YFLCEASNXLG 17
           Y+LCEA N +G
Sbjct: 772 YYLCEAVNGIG 782


>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
           candidate 46 protein.
          Length = 1451

 Score = 21.0 bits (42), Expect = 8.8
 Identities = 7/17 (41%), Positives = 13/17 (76%)
 Frame = -2

Query: 517 RLLCWLSSRFSSLVCIL 467
           RLLC+L +R+ +L  ++
Sbjct: 132 RLLCYLLARYVALALVI 148


>AM292324-1|CAL23136.1|  398|Tribolium castaneum gustatory receptor
           candidate 3 protein.
          Length = 398

 Score = 21.0 bits (42), Expect = 8.8
 Identities = 7/17 (41%), Positives = 13/17 (76%)
 Frame = -2

Query: 517 RLLCWLSSRFSSLVCIL 467
           RLLC+L +R+ +L  ++
Sbjct: 150 RLLCYLLARYVALALVI 166


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 105,550
Number of Sequences: 336
Number of extensions: 1681
Number of successful extensions: 8
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 16760905
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)