BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= brP-0590 (650 letters) Database: human 237,096 sequences; 76,859,062 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value BC009855-1|AAH09855.1| 475|Homo sapiens LTV1 homolog (S. cerevi... 75 2e-13 AL049844-1|CAI21442.1| 475|Homo sapiens LTV1 homolog (S. cerevi... 75 2e-13 AK027815-1|BAB55388.1| 299|Homo sapiens protein ( Homo sapiens ... 75 2e-13 >BC009855-1|AAH09855.1| 475|Homo sapiens LTV1 homolog (S. cerevisiae) protein. Length = 475 Score = 75.4 bits (177), Expect = 2e-13 Identities = 37/66 (56%), Positives = 45/66 (68%) Frame = +1 Query: 142 EPKERWDCETILSTYSNLYNHPKLIEEPKKPKRIVIDPKTGIPKDVLGADGGRLTVKALA 321 E KE+WDCE+I STYSNLYNHP+LI+ KPK+I I KTGIP +VL G LT K Sbjct: 343 EAKEKWDCESICSTYSNLYNHPQLIKYQPKPKQIRISSKTGIPLNVLPKKG--LTAKQTE 400 Query: 322 RFNAMS 339 R ++ Sbjct: 401 RIQMIN 406 >AL049844-1|CAI21442.1| 475|Homo sapiens LTV1 homolog (S. cerevisiae) protein. Length = 475 Score = 75.4 bits (177), Expect = 2e-13 Identities = 37/66 (56%), Positives = 45/66 (68%) Frame = +1 Query: 142 EPKERWDCETILSTYSNLYNHPKLIEEPKKPKRIVIDPKTGIPKDVLGADGGRLTVKALA 321 E KE+WDCE+I STYSNLYNHP+LI+ KPK+I I KTGIP +VL G LT K Sbjct: 343 EAKEKWDCESICSTYSNLYNHPQLIKYQPKPKQIRISSKTGIPLNVLPKKG--LTAKQTE 400 Query: 322 RFNAMS 339 R ++ Sbjct: 401 RIQMIN 406 >AK027815-1|BAB55388.1| 299|Homo sapiens protein ( Homo sapiens cDNA FLJ14909 fis, clone PLACE1006037. ). Length = 299 Score = 75.4 bits (177), Expect = 2e-13 Identities = 37/66 (56%), Positives = 45/66 (68%) Frame = +1 Query: 142 EPKERWDCETILSTYSNLYNHPKLIEEPKKPKRIVIDPKTGIPKDVLGADGGRLTVKALA 321 E KE+WDCE+I STYSNLYNHP+LI+ KPK+I I KTGIP +VL G LT K Sbjct: 167 EAKEKWDCESICSTYSNLYNHPQLIKYQPKPKQIRISSKTGIPLNVLPKKG--LTAKQTE 224 Query: 322 RFNAMS 339 R ++ Sbjct: 225 RIQMIN 230 Database: human Posted date: Oct 23, 2007 1:18 PM Number of letters in database: 76,859,062 Number of sequences in database: 237,096 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 66,938,777 Number of Sequences: 237096 Number of extensions: 1095756 Number of successful extensions: 3074 Number of sequences better than 10.0: 3 Number of HSP's better than 10.0 without gapping: 2959 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 3074 length of database: 76,859,062 effective HSP length: 87 effective length of database: 56,231,710 effective search space used: 7253890590 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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