Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brP-0588
         (687 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q023X8 Cluster: Putative uncharacterized protein; n=1; ...    36   1.2  
UniRef50_Q8NEG2 Cluster: LOC136288 protein; n=18; Eutheria|Rep: ...    35   1.6  
UniRef50_Q8ILR9 Cluster: Putative uncharacterized protein; n=1; ...    34   2.8  
UniRef50_Q4QAQ9 Cluster: Putative uncharacterized protein; n=2; ...    34   2.8  
UniRef50_Q5A3V9 Cluster: Likely protein kinase; n=5; Saccharomyc...    34   2.8  
UniRef50_Q0V0A9 Cluster: Putative uncharacterized protein; n=1; ...    34   2.8  
UniRef50_UPI0000D9CDEF Cluster: PREDICTED: hypothetical protein;...    34   3.7  
UniRef50_UPI00015B9493 Cluster: UPI00015B9493 related cluster; n...    33   4.9  
UniRef50_Q54FH3 Cluster: Putative uncharacterized protein; n=1; ...    33   6.5  
UniRef50_UPI0000F2C785 Cluster: PREDICTED: similar to Electron-t...    33   8.6  
UniRef50_A6SHZ0 Cluster: Putative uncharacterized protein; n=1; ...    33   8.6  

>UniRef50_Q023X8 Cluster: Putative uncharacterized protein; n=1;
           Solibacter usitatus Ellin6076|Rep: Putative
           uncharacterized protein - Solibacter usitatus (strain
           Ellin6076)
          Length = 306

 Score = 35.5 bits (78), Expect = 1.2
 Identities = 27/91 (29%), Positives = 40/91 (43%)
 Frame = -3

Query: 547 NSTDLIVSGGGTGSNFANAGPNPRKRGGLSWSWRLSTVKLSTPNINAAAVNYPDPNNAST 368
           + T+L  + GG    FA  G   R  G L+ + R+     S P + AAAV   DP  A+ 
Sbjct: 55  DETELCATLGGAVERFATGGALFRIAGQLAGNERIEFTLSSAPAV-AAAVEARDPLVAAA 113

Query: 367 ASQELNXFQRHCRGRTPEPTMCXFPRNPHEA 275
              E++       G +P+  +  FP    EA
Sbjct: 114 TPGEVSTALIEFFGHSPDARVFLFPLEVREA 144


>UniRef50_Q8NEG2 Cluster: LOC136288 protein; n=18; Eutheria|Rep:
           LOC136288 protein - Homo sapiens (Human)
          Length = 365

 Score = 35.1 bits (77), Expect = 1.6
 Identities = 22/65 (33%), Positives = 26/65 (40%)
 Frame = -3

Query: 466 GLSWSWRLSTVKLSTPNINAAAVNYPDPNNASTASQELNXFQRHCRGRTPEPTMCXFPRN 287
           G  W    S VK  TP   AA   + DP  A+ A    +  QR    RTP P    F R+
Sbjct: 8   GFGWLQPASRVKTPTPG--AAGSTHGDPRGAAAAPGNWSSRQRPAHPRTPGPAASVFSRS 65

Query: 286 PHEAT 272
               T
Sbjct: 66  VQRLT 70


>UniRef50_Q8ILR9 Cluster: Putative uncharacterized protein; n=1;
            Plasmodium falciparum 3D7|Rep: Putative uncharacterized
            protein - Plasmodium falciparum (isolate 3D7)
          Length = 4662

 Score = 34.3 bits (75), Expect = 2.8
 Identities = 23/87 (26%), Positives = 38/87 (43%), Gaps = 1/87 (1%)
 Frame = -3

Query: 601  SLHQVRFNKTKYYRIGDNNSTDLIVSGGGTGSNFANAGPNPRKRGGLSWSW-RLSTVKLS 425
            +++ V  N+     +G N     I + G    N  N G N      +S +   ++ V ++
Sbjct: 3937 NINNVGMNQPNINNVGMNQPN--INNVGMNQPNINNVGMNQPNINNVSMNQPNINNVNMN 3994

Query: 424  TPNINAAAVNYPDPNNASTASQELNXF 344
             PNIN  ++N P+ NN S      N F
Sbjct: 3995 QPNINNVSMNQPNINNFSMNQSNTNNF 4021


>UniRef50_Q4QAQ9 Cluster: Putative uncharacterized protein; n=2;
           Leishmania|Rep: Putative uncharacterized protein -
           Leishmania major
          Length = 1074

 Score = 34.3 bits (75), Expect = 2.8
 Identities = 30/112 (26%), Positives = 47/112 (41%), Gaps = 6/112 (5%)
 Frame = -3

Query: 565 YRIGDNNSTDLIVSGGGTGSNFANAGPNPRKRGGLSWSWRLSTVK---LSTPNINAAAVN 395
           +R   + ST + ++  GTG   A     PR+   + + +R S  +   + TPN      +
Sbjct: 233 FRQQPDASTAVNINDAGTGCALACLPETPRRPMQVCF-FRSSESRWQGVRTPNETVLEAD 291

Query: 394 YPDPNNASTASQELNXFQRHCRGRTP--EPTMCXF-PRNPHEATTLRIIDPR 248
             D N   T   + N  Q H R R P  E   C   PR PH  +T+  +  +
Sbjct: 292 -SDGNGTDTHGDQKNFIQSHARDRVPHEETEPCVTPPRTPHAVSTITTLQEK 342


>UniRef50_Q5A3V9 Cluster: Likely protein kinase; n=5;
           Saccharomycetales|Rep: Likely protein kinase - Candida
           albicans (Yeast)
          Length = 1153

 Score = 34.3 bits (75), Expect = 2.8
 Identities = 24/100 (24%), Positives = 43/100 (43%), Gaps = 6/100 (6%)
 Frame = -3

Query: 637 FKMLASSILFA*SLHQ------VRFNKTKYYRIGDNNSTDLIVSGGGTGSNFANAGPNPR 476
           +KM A S++    L++      ++ N  K      N +      GGG+ +    + P P 
Sbjct: 524 YKMTAKSMMKVPELNKAPVTTVIKKNVKKSTNSNSNTNNVTTAVGGGSSNGHKGSSPTPE 583

Query: 475 KRGGLSWSWRLSTVKLSTPNINAAAVNYPDPNNASTASQE 356
           K    +     ST K+S  ++ A  +N P  N  S+ S++
Sbjct: 584 KEPSPATINNKSTEKVSAASVAAYVLNKPATNQNSSTSED 623


>UniRef50_Q0V0A9 Cluster: Putative uncharacterized protein; n=1;
           Phaeosphaeria nodorum|Rep: Putative uncharacterized
           protein - Phaeosphaeria nodorum (Septoria nodorum)
          Length = 287

 Score = 34.3 bits (75), Expect = 2.8
 Identities = 17/68 (25%), Positives = 30/68 (44%)
 Frame = -3

Query: 562 RIGDNNSTDLIVSGGGTGSNFANAGPNPRKRGGLSWSWRLSTVKLSTPNINAAAVNYPDP 383
           ++ D +    ++S    G+       + +  G +   W+    KL+ PN  AA    P P
Sbjct: 44  KVRDTSEKPTLLSRISGGAGVQKRSSSAKPAGSIEGKWQHDLHKLNNPNGPAARARGPGP 103

Query: 382 NNASTASQ 359
           N  ++ASQ
Sbjct: 104 NRTTSASQ 111


>UniRef50_UPI0000D9CDEF Cluster: PREDICTED: hypothetical protein;
           n=1; Macaca mulatta|Rep: PREDICTED: hypothetical protein
           - Macaca mulatta
          Length = 200

 Score = 33.9 bits (74), Expect = 3.7
 Identities = 27/94 (28%), Positives = 42/94 (44%), Gaps = 2/94 (2%)
 Frame = -3

Query: 493 AGPNPRKRGGLSWSWRLSTVKLSTPNINA-AAVNYPD-PNNASTASQELNXFQRHCRGRT 320
           AGPN    G  S S   S+  LS+ ++++ ++ + P  P++ S+ S   N      R   
Sbjct: 25  AGPNALGSGCSSSSSSSSSSVLSSSSLSSRSSPSSPSSPSSPSSPSSRSNPSSPSSRSSR 84

Query: 319 PEPTMCXFPRNPHEATTLRIIDPRRLEVGRISGS 218
           P P+    P NP  A++     P R    R S S
Sbjct: 85  PNPSSRPSPSNPSSASSASSSSPNRSSSPRSSSS 118


>UniRef50_UPI00015B9493 Cluster: UPI00015B9493 related cluster; n=2;
           unknown|Rep: UPI00015B9493 UniRef100 entry - unknown
          Length = 2205

 Score = 33.5 bits (73), Expect = 4.9
 Identities = 14/41 (34%), Positives = 23/41 (56%)
 Frame = -3

Query: 589 VRFNKTKYYRIGDNNSTDLIVSGGGTGSNFANAGPNPRKRG 467
           +R N  +++ IG     D+IVSGGG  + +  AG +  + G
Sbjct: 804 IRVNSNEHFTIGGTEGNDIIVSGGGDDAIWGKAGDDRIEAG 844


>UniRef50_Q54FH3 Cluster: Putative uncharacterized protein; n=1;
           Dictyostelium discoideum AX4|Rep: Putative
           uncharacterized protein - Dictyostelium discoideum AX4
          Length = 419

 Score = 33.1 bits (72), Expect = 6.5
 Identities = 31/123 (25%), Positives = 49/123 (39%), Gaps = 3/123 (2%)
 Frame = -3

Query: 580 NKTKYYRIGDNNSTDLIVSGGGTGSNFANAGPNPRKRGGLSWSWRLSTVKLSTPNINAAA 401
           NK  +  +GD  S+ L  + GG G NF N    P     +S S+  S     + ++   +
Sbjct: 182 NKDGHLVLGDFGSSKLANNSGGGGGNFGNTLTVP-----MSTSYSTSPSSSISSSLLGGS 236

Query: 400 VNYPDPNNASTASQELNXFQRHCRGRT---PEPTMCXFPRNPHEATTLRIIDPRRLEVGR 230
             +   +    A    + F     GR+     P    F RNPH + T  I  P+ + V  
Sbjct: 237 GGFTPSHWNGMAGSAGSSFGSSSLGRSFDNTPPNFNSFLRNPHSSYTSYIGTPQYMAVEV 296

Query: 229 ISG 221
           + G
Sbjct: 297 VQG 299


>UniRef50_UPI0000F2C785 Cluster: PREDICTED: similar to
           Electron-transfer-flavoprotein, alpha polypeptide; n=1;
           Monodelphis domestica|Rep: PREDICTED: similar to
           Electron-transfer-flavoprotein, alpha polypeptide -
           Monodelphis domestica
          Length = 1093

 Score = 32.7 bits (71), Expect = 8.6
 Identities = 17/40 (42%), Positives = 22/40 (55%)
 Frame = +3

Query: 210 RPIDPLILPTSNLLGSIILNVVAS*GFLGKXHMVGSGVLP 329
           RPI P +LP +  + S +L  V   G +   H V SGVLP
Sbjct: 448 RPIAPNVLPVNQPVASSVLQAVPP-GMISMGHTVPSGVLP 486


>UniRef50_A6SHZ0 Cluster: Putative uncharacterized protein; n=1;
           Botryotinia fuckeliana B05.10|Rep: Putative
           uncharacterized protein - Botryotinia fuckeliana B05.10
          Length = 1122

 Score = 32.7 bits (71), Expect = 8.6
 Identities = 18/55 (32%), Positives = 27/55 (49%)
 Frame = -3

Query: 535 LIVSGGGTGSNFANAGPNPRKRGGLSWSWRLSTVKLSTPNINAAAVNYPDPNNAS 371
           ++  G GTGS  A+     R+ G  +  W  S +KL  P+I     N+P   +AS
Sbjct: 463 VVAHGSGTGSEIASCNYPAREFGIKNGMWMKSAIKL-CPDIKVLPYNFPAYEDAS 516


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 563,977,534
Number of Sequences: 1657284
Number of extensions: 10774161
Number of successful extensions: 24280
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 23355
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 24248
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 53719013270
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)