Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brP-0588
         (687 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT011477-1|AAR99135.1|  740|Drosophila melanogaster RE10036p pro...    31   1.1  
AE013599-2718|AAF57675.3|  740|Drosophila melanogaster CG15069-P...    31   1.1  
AY128429-1|AAM75022.1|  953|Drosophila melanogaster GH26723p pro...    31   1.5  
AE014134-3116|AAF53814.1| 1309|Drosophila melanogaster CG10188-P...    31   1.5  
AE014134-3115|AAN11046.2| 1309|Drosophila melanogaster CG10188-P...    31   1.5  
BT014665-1|AAT27289.1| 1305|Drosophila melanogaster GH04794p pro...    30   3.4  

>BT011477-1|AAR99135.1|  740|Drosophila melanogaster RE10036p
           protein.
          Length = 740

 Score = 31.5 bits (68), Expect = 1.1
 Identities = 17/52 (32%), Positives = 25/52 (48%), Gaps = 1/52 (1%)
 Frame = -3

Query: 553 DNNSTDLIVSGGGTGSNFANAGPNPRKRGGLSWSWRLSTV-KLSTPNINAAA 401
           D +    +  GG  G  +A  GPN R+R      W L  + K+   N++AAA
Sbjct: 183 DESMAVAMAMGGAGGGGYAQGGPNKRQRD----EWELPVISKIEARNLSAAA 230


>AE013599-2718|AAF57675.3|  740|Drosophila melanogaster CG15069-PA,
           isoform A protein.
          Length = 740

 Score = 31.5 bits (68), Expect = 1.1
 Identities = 17/52 (32%), Positives = 25/52 (48%), Gaps = 1/52 (1%)
 Frame = -3

Query: 553 DNNSTDLIVSGGGTGSNFANAGPNPRKRGGLSWSWRLSTV-KLSTPNINAAA 401
           D +    +  GG  G  +A  GPN R+R      W L  + K+   N++AAA
Sbjct: 183 DESMAVAMAMGGAGGGGYAQGGPNKRQRD----EWELPVISKIEARNLSAAA 230


>AY128429-1|AAM75022.1|  953|Drosophila melanogaster GH26723p
           protein.
          Length = 953

 Score = 31.1 bits (67), Expect = 1.5
 Identities = 19/69 (27%), Positives = 31/69 (44%)
 Frame = -3

Query: 559 IGDNNSTDLIVSGGGTGSNFANAGPNPRKRGGLSWSWRLSTVKLSTPNINAAAVNYPDPN 380
           + D++ TD  +SG GTGS+  + G    +R      W   +    TP +N  + N     
Sbjct: 751 LDDSHETDNGLSGSGTGSSTPSVGGTFDRR---KEKWLSGSSSCKTPPVNLISANNAPKV 807

Query: 379 NASTASQEL 353
           N +   Q+L
Sbjct: 808 NPTLVKQKL 816


>AE014134-3116|AAF53814.1| 1309|Drosophila melanogaster CG10188-PB,
            isoform B protein.
          Length = 1309

 Score = 31.1 bits (67), Expect = 1.5
 Identities = 19/69 (27%), Positives = 31/69 (44%)
 Frame = -3

Query: 559  IGDNNSTDLIVSGGGTGSNFANAGPNPRKRGGLSWSWRLSTVKLSTPNINAAAVNYPDPN 380
            + D++ TD  +SG GTGS+  + G    +R      W   +    TP +N  + N     
Sbjct: 1107 LDDSHETDNGLSGSGTGSSTPSVGGTFDRR---KEKWLSGSSSCKTPPVNLISANNAPKV 1163

Query: 379  NASTASQEL 353
            N +   Q+L
Sbjct: 1164 NPTLVKQKL 1172


>AE014134-3115|AAN11046.2| 1309|Drosophila melanogaster CG10188-PA,
            isoform A protein.
          Length = 1309

 Score = 31.1 bits (67), Expect = 1.5
 Identities = 19/69 (27%), Positives = 31/69 (44%)
 Frame = -3

Query: 559  IGDNNSTDLIVSGGGTGSNFANAGPNPRKRGGLSWSWRLSTVKLSTPNINAAAVNYPDPN 380
            + D++ TD  +SG GTGS+  + G    +R      W   +    TP +N  + N     
Sbjct: 1107 LDDSHETDNGLSGSGTGSSTPSVGGTFDRR---KEKWLSGSSSCKTPPVNLISANNAPKV 1163

Query: 379  NASTASQEL 353
            N +   Q+L
Sbjct: 1164 NPTLVKQKL 1172


>BT014665-1|AAT27289.1| 1305|Drosophila melanogaster GH04794p
           protein.
          Length = 1305

 Score = 29.9 bits (64), Expect = 3.4
 Identities = 16/37 (43%), Positives = 20/37 (54%), Gaps = 1/37 (2%)
 Frame = -3

Query: 427 STPNINAAAVNYPDPNNAS-TASQELNXFQRHCRGRT 320
           +TPN N AA    DP+NA+  +S   N    HC G T
Sbjct: 831 ATPNANNAAGTGTDPDNAAHPSSATANSNNSHCIGNT 867


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 25,503,337
Number of Sequences: 53049
Number of extensions: 523558
Number of successful extensions: 1414
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 1342
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1411
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 3013199100
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)