BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= brP-0585 (750 letters) Database: spombe 5004 sequences; 2,362,478 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value SPAPB1E7.04c |||chitinase |Schizosaccharomyces pombe|chr 1|||Manual 32 0.076 SPBC1E8.05 |||conserved fungal protein|Schizosaccharomyces pombe... 29 0.54 SPAC1527.01 |mok11|SPAC23D3.15|alpha-1,3-glucan synthase Mok11|S... 29 0.94 SPCC1840.08c |||protein disulfide isomerase |Schizosaccharomyces... 29 0.94 SPAC18B11.04 |ncs1||related to neuronal calcium sensor Ncs1|Schi... 29 0.94 SPAPB18E9.04c |||sequence orphan|Schizosaccharomyces pombe|chr 1... 29 0.94 SPBC30B4.04c |sol1||SWI/SNF complex subunit Sol1|Schizosaccharom... 28 1.2 SPAC513.05 |ams1||alpha-mannosidase |Schizosaccharomyces pombe|c... 28 1.6 SPAC5D6.07c |||PXA domain protein|Schizosaccharomyces pombe|chr ... 27 2.2 SPAC821.07c |moc3||transcription factor Moc3|Schizosaccharomyces... 27 2.9 SPCC830.06 |||calcineurin regulatory subunit |Schizosaccharomyce... 27 3.8 SPAC56F8.04c |coq2|ppt1|para-hydroxybenzoate--polyprenyltransfer... 26 5.0 SPAPB1E7.09 |ogm2|oma2|protein O-mannosyltransferase Ogm2|Schizo... 26 6.6 SPBC1703.01c ||SPBP4H10.22c|RNase P and RNase MRP subunit|Schizo... 25 8.7 SPAC12B10.11 |exg2||glucan 1,3-beta-glucosidase Exg2|Schizosacch... 25 8.7 SPBPJ4664.02 |||glycoprotein |Schizosaccharomyces pombe|chr 2|||... 25 8.7 >SPAPB1E7.04c |||chitinase |Schizosaccharomyces pombe|chr 1|||Manual Length = 1236 Score = 32.3 bits (70), Expect = 0.076 Identities = 41/148 (27%), Positives = 64/148 (43%), Gaps = 3/148 (2%) Frame = -3 Query: 490 AILHSLGSIPYEEQTVVNSSQSIVPSALASSS*NMNWQ*SCCHFRAADGX*A*SFHIDTH 311 ++L S SIP + +SS + + S ++SSS + S ++ S + Sbjct: 537 SVLSSSSSIPTSSSSDFSSSITTISSGISSSSIPSTFS-SVSSILSSSTSSPSSTSLSIS 595 Query: 310 SSTETCPSLLESARFLNPSQILIMIS*VSVFFWSPGFHPRRLQIFS---IANSKSFLSMV 140 SS+ + S SA +PS I IS S SP L I S I+ S S LS Sbjct: 596 SSSTS--STFSSASTSSPSSISSSISSSSTILSSPTPSTSSLMISSSSIISGSSSILSSS 653 Query: 139 PLWLTSKNTLNTYRSFFLLNSETDIFES 56 + ++L+TY S + +S T + S Sbjct: 654 ISTIPISSSLSTYSSSVIPSSSTLVSSS 681 >SPBC1E8.05 |||conserved fungal protein|Schizosaccharomyces pombe|chr 2|||Manual Length = 317 Score = 29.5 bits (63), Expect = 0.54 Identities = 16/54 (29%), Positives = 30/54 (55%) Frame = +1 Query: 403 TLAPMGLSTVTNSPLFAPRTESTPTNARWLSXRWPRASTTCPGXSSRNYGRSTS 564 ++AP + T T+S F + STP+++ S P +S++ SS++ S+S Sbjct: 131 SIAPSMIGTRTSSSYFITSSSSTPSSSSSSSSSSPSSSSSKSSSSSKSSSSSSS 184 >SPAC1527.01 |mok11|SPAC23D3.15|alpha-1,3-glucan synthase Mok11|Schizosaccharomyces pombe|chr 1|||Manual Length = 2397 Score = 28.7 bits (61), Expect = 0.94 Identities = 15/61 (24%), Positives = 24/61 (39%) Frame = +3 Query: 183 CSLRGWKPGDQKNTETHEIMIKIWDGLRKRADSNKDGQVSVEEWVSMWNDYAXNPSAALK 362 C+L GW + + H IM++ W L SN + +E W + S + Sbjct: 903 CNLSGWSQSSRYGWKGHHIMVQYWSEL--TGSSNYMQESDLEYPYKRWFPHVFMDSDYTQ 960 Query: 363 W 365 W Sbjct: 961 W 961 >SPCC1840.08c |||protein disulfide isomerase |Schizosaccharomyces pombe|chr 3|||Manual Length = 561 Score = 28.7 bits (61), Expect = 0.94 Identities = 15/48 (31%), Positives = 27/48 (56%), Gaps = 1/48 (2%) Frame = +3 Query: 24 VLPSLN-ENQTRDSKMSVSEFRRKKLLYVFNVFFDVNQSGTIERKDFE 164 ++P+ N +NQ ++ VS F+ +KLL + +N G+ E DF+ Sbjct: 59 IMPTANRDNQGVREELLVSSFKERKLLNTNSANLRLNSIGSYEMIDFK 106 >SPAC18B11.04 |ncs1||related to neuronal calcium sensor Ncs1|Schizosaccharomyces pombe|chr 1|||Manual Length = 190 Score = 28.7 bits (61), Expect = 0.94 Identities = 9/23 (39%), Positives = 17/23 (73%) Frame = +3 Query: 534 EFQELWKEYFSTXDPNAAGNFIF 602 EFQ+++K++F DP+A ++F Sbjct: 47 EFQKIYKQFFPFGDPSAFAEYVF 69 Score = 28.7 bits (61), Expect = 0.94 Identities = 20/75 (26%), Positives = 42/75 (56%), Gaps = 1/75 (1%) Frame = +3 Query: 93 KLLYVFNVFFDVNQSGTIERKDFELAIEKICSLRGWKPGDQKNTETHEIMI-KIWDGLRK 269 KL++ F ++ D++ +G I + ++ I + G ++ +T E + KI++ + Sbjct: 100 KLIWAFQLY-DLDNNGLISYDEMLRIVDAIYKMVGSMVKLPEDEDTPEKRVNKIFNMM-- 156 Query: 270 RADSNKDGQVSVEEW 314 D NKDGQ+++EE+ Sbjct: 157 --DKNKDGQLTLEEF 169 >SPAPB18E9.04c |||sequence orphan|Schizosaccharomyces pombe|chr 1|||Manual Length = 800 Score = 28.7 bits (61), Expect = 0.94 Identities = 13/34 (38%), Positives = 18/34 (52%) Frame = +1 Query: 373 STANSCFNWKTLAPMGLSTVTNSPLFAPRTESTP 474 ST+ SC ++ P G ST +P P + STP Sbjct: 388 STSTSCTTSTSIPPTGNSTTPVTPTVPPTSSSTP 421 Score = 27.1 bits (57), Expect = 2.9 Identities = 27/79 (34%), Positives = 33/79 (41%), Gaps = 2/79 (2%) Frame = +1 Query: 373 STANSCFNWKTLAPMGLSTVTNSPLFAP-RTESTPTNARWLSXRWPRASTTCPGXSSRN- 546 ST+ SC ++ P G ST +P P T ST T P AST+ G SS Sbjct: 334 STSTSCTTSTSIPPTGNSTTPVTPTVPPTSTSSTSTPP-------PPASTSSTGTSSSPL 386 Query: 547 YGRSTSLLXILMRPGTSSS 603 STS P T +S Sbjct: 387 LSTSTSCTTSTSIPPTGNS 405 Score = 25.8 bits (54), Expect = 6.6 Identities = 26/79 (32%), Positives = 33/79 (41%), Gaps = 2/79 (2%) Frame = +1 Query: 373 STANSCFNWKTLAPMGLSTVTNSPLFAP-RTESTPTNARWLSXRWPRASTTCPGXSSRNY 549 +T+ SC ++ P G ST +P P T ST T P AST+ G SS Sbjct: 280 TTSTSCTTSTSIPPTGNSTTPVTPTVPPTSTSSTSTPP-------PPASTSSTGTSSSPL 332 Query: 550 -GRSTSLLXILMRPGTSSS 603 STS P T +S Sbjct: 333 PSTSTSCTTSTSIPPTGNS 351 >SPBC30B4.04c |sol1||SWI/SNF complex subunit Sol1|Schizosaccharomyces pombe|chr 2|||Manual Length = 865 Score = 28.3 bits (60), Expect = 1.2 Identities = 21/60 (35%), Positives = 33/60 (55%), Gaps = 7/60 (11%) Frame = +3 Query: 33 SLNENQTRDSKMSVSEFR-RKKLLYVFNVF-----FDVNQSGTIERKD-FELAIEKICSL 191 SL+EN+T+DS ++ + LL VF +F F+ NQ+ ++ D F L I + SL Sbjct: 527 SLSENKTKDSINAIDVHNSEQNLLAVFVIFRNLSHFEANQNVLVQNPDFFPLLIRVVKSL 586 >SPAC513.05 |ams1||alpha-mannosidase |Schizosaccharomyces pombe|chr 1|||Manual Length = 1077 Score = 27.9 bits (59), Expect = 1.6 Identities = 18/54 (33%), Positives = 21/54 (38%) Frame = +1 Query: 319 LCGMTTLXTHQQL*NGSNSTANSCFNWKTLAPMGLSTVTNSPLFAPRTESTPTN 480 LCGM T + N NS S FNW L G + + P T T N Sbjct: 416 LCGMDRFLTQKLSWNNINSFPTSTFNWVALD--GSQVICHMPPANTYTADTNVN 467 >SPAC5D6.07c |||PXA domain protein|Schizosaccharomyces pombe|chr 1|||Manual Length = 495 Score = 27.5 bits (58), Expect = 2.2 Identities = 13/29 (44%), Positives = 23/29 (79%) Frame = +1 Query: 400 KTLAPMGLSTVTNSPLFAPRTESTPTNAR 486 +T A + LSTVT++P+F+ T+S+P ++R Sbjct: 364 ETNASVALSTVTSTPVFS--TDSSPLSSR 390 >SPAC821.07c |moc3||transcription factor Moc3|Schizosaccharomyces pombe|chr 1|||Manual Length = 497 Score = 27.1 bits (57), Expect = 2.9 Identities = 11/32 (34%), Positives = 23/32 (71%) Frame = -3 Query: 490 AILHSLGSIPYEEQTVVNSSQSIVPSALASSS 395 A + ++GS+ E +V ++ Q ++P+++ASSS Sbjct: 71 AQMQAMGSVSPPELSVHSAQQPLIPTSIASSS 102 >SPCC830.06 |||calcineurin regulatory subunit |Schizosaccharomyces pombe|chr 3|||Manual Length = 174 Score = 26.6 bits (56), Expect = 3.8 Identities = 16/52 (30%), Positives = 30/52 (57%), Gaps = 2/52 (3%) Frame = +3 Query: 39 NENQTRDSKMSVSEFRRKKLLYVFNVFF--DVNQSGTIERKDFELAIEKICS 188 +++Q + +S S F +++ + F D NQSG+I+R +F L+I + S Sbjct: 4 SQSQIFEDLISNSSFSNEEIERIRKRFIKIDANQSGSIDRNEF-LSIPSVAS 54 >SPAC56F8.04c |coq2|ppt1|para-hydroxybenzoate-- polyprenyltransferaseCoq2|Schizosaccharomyces pombe|chr 1|||Manual Length = 358 Score = 26.2 bits (55), Expect = 5.0 Identities = 8/17 (47%), Positives = 13/17 (76%) Frame = +1 Query: 385 SCFNWKTLAPMGLSTVT 435 +C NW +AP+ LST++ Sbjct: 223 ACMNWSVVAPLYLSTIS 239 >SPAPB1E7.09 |ogm2|oma2|protein O-mannosyltransferase Ogm2|Schizosaccharomyces pombe|chr 1|||Manual Length = 739 Score = 25.8 bits (54), Expect = 6.6 Identities = 9/18 (50%), Positives = 12/18 (66%) Frame = -3 Query: 559 YSFHSSWNSSQDTLCLPL 506 Y F WN++ TLC+PL Sbjct: 141 YKFMRLWNAAFGTLCIPL 158 >SPBC1703.01c ||SPBP4H10.22c|RNase P and RNase MRP subunit|Schizosaccharomyces pombe|chr 2|||Manual Length = 217 Score = 25.4 bits (53), Expect = 8.7 Identities = 12/25 (48%), Positives = 17/25 (68%) Frame = +3 Query: 24 VLPSLNENQTRDSKMSVSEFRRKKL 98 ++PSLN + D K SV+ +RKKL Sbjct: 50 LVPSLNLEKQGDRKESVASKKRKKL 74 >SPAC12B10.11 |exg2||glucan 1,3-beta-glucosidase Exg2|Schizosaccharomyces pombe|chr 1|||Manual Length = 570 Score = 25.4 bits (53), Expect = 8.7 Identities = 11/28 (39%), Positives = 19/28 (67%) Frame = -2 Query: 461 VRGANSGEFVTVDSPIGASVFQLKHELA 378 +RG N G +++++ I S FQ+K+E A Sbjct: 160 IRGVNLGGWLSMEPFITPSFFQVKNETA 187 >SPBPJ4664.02 |||glycoprotein |Schizosaccharomyces pombe|chr 2|||Manual Length = 3971 Score = 25.4 bits (53), Expect = 8.7 Identities = 17/47 (36%), Positives = 24/47 (51%) Frame = -3 Query: 535 SSQDTLCLPLAILXKAILHSLGSIPYEEQTVVNSSQSIVPSALASSS 395 +S L I ++L+S S P TVVNSS I S++ +SS Sbjct: 1921 TSSSVLNSSTPITSSSVLNS--STPITSSTVVNSSTPITSSSVLNSS 1965 Score = 25.4 bits (53), Expect = 8.7 Identities = 17/47 (36%), Positives = 24/47 (51%) Frame = -3 Query: 535 SSQDTLCLPLAILXKAILHSLGSIPYEEQTVVNSSQSIVPSALASSS 395 +S L I ++L+S S P TVVNSS I S++ +SS Sbjct: 2113 TSSSVLNSSTPITSSSVLNS--STPITSSTVVNSSTPITSSSVLNSS 2157 Score = 25.4 bits (53), Expect = 8.7 Identities = 17/47 (36%), Positives = 24/47 (51%) Frame = -3 Query: 535 SSQDTLCLPLAILXKAILHSLGSIPYEEQTVVNSSQSIVPSALASSS 395 +S L I ++L+S S P TVVNSS I S++ +SS Sbjct: 2425 TSSSVLNSSTPITSSSVLNS--STPITSSTVVNSSTPITSSSVLNSS 2469 Database: spombe Posted date: Oct 4, 2007 10:57 AM Number of letters in database: 2,362,478 Number of sequences in database: 5004 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 2,876,117 Number of Sequences: 5004 Number of extensions: 58089 Number of successful extensions: 238 Number of sequences better than 10.0: 16 Number of HSP's better than 10.0 without gapping: 190 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 238 length of database: 2,362,478 effective HSP length: 71 effective length of database: 2,007,194 effective search space used: 357280532 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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