Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brP-0585
(750 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_46583| Best HMM Match : Hus1 (HMM E-Value=0) 36 0.027
SB_23229| Best HMM Match : efhand (HMM E-Value=6.8e-25) 34 0.11
SB_43375| Best HMM Match : Pneumo_att_G (HMM E-Value=3.6) 33 0.33
SB_37671| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.43
SB_23227| Best HMM Match : efhand (HMM E-Value=4.8e-26) 31 0.76
SB_5690| Best HMM Match : efhand (HMM E-Value=7.39998e-41) 31 1.00
SB_2411| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.00
SB_50582| Best HMM Match : Mito_carr (HMM E-Value=2.1e-23) 31 1.3
SB_31142| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.3
SB_50451| Best HMM Match : Avirulence (HMM E-Value=0.14) 30 2.3
SB_39963| Best HMM Match : EGF (HMM E-Value=1.4e-13) 29 3.0
SB_25956| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.0
SB_23228| Best HMM Match : efhand (HMM E-Value=6.8e-25) 29 4.0
SB_51340| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.0
SB_49196| Best HMM Match : efhand (HMM E-Value=3.4e-39) 29 4.0
SB_44952| Best HMM Match : efhand (HMM E-Value=3.4e-39) 29 4.0
SB_37673| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.0
SB_36414| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.0
SB_55989| Best HMM Match : zf-C2H2 (HMM E-Value=8e-08) 29 5.3
SB_18162| Best HMM Match : E-MAP-115 (HMM E-Value=0.21) 28 7.0
SB_2495| Best HMM Match : Pox_A_type_inc (HMM E-Value=8.2e-11) 28 7.0
SB_56102| Best HMM Match : Hormone_6 (HMM E-Value=2.6) 28 9.3
SB_43842| Best HMM Match : RNB (HMM E-Value=0) 28 9.3
SB_27812| Best HMM Match : efhand (HMM E-Value=1.7e-07) 28 9.3
SB_6795| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.3
>SB_46583| Best HMM Match : Hus1 (HMM E-Value=0)
Length = 646
Score = 36.3 bits (80), Expect = 0.027
Identities = 21/79 (26%), Positives = 35/79 (44%), Gaps = 3/79 (3%)
Frame = +3
Query: 390 FQLEDASADGTIDCDEFTTVCSSYGIDPNECKMAFXKM---AKGKHNVSWXEFQELWKEY 560
F L D DG I+CD+ + S G++P ++ + KG VS+ EF ++
Sbjct: 520 FSLFDRVGDGKIECDQIGCLLRSLGLNPTGAEVKKIEKDVDPKGIARVSFEEFLPIYTSA 579
Query: 561 FSTXDPNAAGNFIFGRTTF 617
+ +A F+ G F
Sbjct: 580 YQKKQTGSADEFVEGLRVF 598
>SB_23229| Best HMM Match : efhand (HMM E-Value=6.8e-25)
Length = 191
Score = 34.3 bits (75), Expect = 0.11
Identities = 30/97 (30%), Positives = 46/97 (47%), Gaps = 3/97 (3%)
Frame = +3
Query: 213 QKNTETHEIMIKIW-DGLRKRADSNKDGQVSVEEWVSMWNDYAXNPSAALKWQQLYCQFM 389
+ NTE E ++ W G K DG +SVEE+ ++ ++ A+ + + +
Sbjct: 17 KNNTEFSETELQEWYKGFLKDCP---DGSLSVEEFKKIYGNFFPYGDASK-----FAEHV 68
Query: 390 FQLEDASADGTIDCDEFTTVCS--SYGIDPNECKMAF 494
F+ DA+ DGTID EF S S G + K AF
Sbjct: 69 FRTFDANGDGTIDFREFICALSVTSRGKLEEKLKWAF 105
Score = 27.9 bits (59), Expect = 9.3
Identities = 19/76 (25%), Positives = 39/76 (51%)
Frame = +3
Query: 90 KKLLYVFNVFFDVNQSGTIERKDFELAIEKICSLRGWKPGDQKNTETHEIMIKIWDGLRK 269
+KL + F+++ D++ +G I R++ + I + G K E K D + +
Sbjct: 99 EKLKWAFSMY-DLDGNGYISRQEMLEIVRAIYKMVG---SVMKMPEDESTPEKRTDKIFR 154
Query: 270 RADSNKDGQVSVEEWV 317
+ D N DG++S+ E++
Sbjct: 155 QMDKNLDGKLSLAEFI 170
>SB_43375| Best HMM Match : Pneumo_att_G (HMM E-Value=3.6)
Length = 774
Score = 32.7 bits (71), Expect = 0.33
Identities = 25/81 (30%), Positives = 38/81 (46%)
Frame = +1
Query: 361 NGSNSTANSCFNWKTLAPMGLSTVTNSPLFAPRTESTPTNARWLSXRWPRASTTCPGXSS 540
N ++S+++S N KT T+T +P TPTN +S STT P SS
Sbjct: 47 NNNSSSSSSSSNKKTTPLCPPITLTQTPTSISNVTPTPTNINNIS------STTTPLDSS 100
Query: 541 RNYGRSTSLLXILMRPGTSSS 603
+ +L + +RP S+S
Sbjct: 101 ATTTTTPTLPIVTLRPPPSTS 121
>SB_37671| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 708
Score = 32.3 bits (70), Expect = 0.43
Identities = 19/59 (32%), Positives = 27/59 (45%), Gaps = 2/59 (3%)
Frame = +3
Query: 276 DSNKDGQVSVEEW--VSMWNDYAXNPSAALKWQQLYCQFMFQLEDASADGTIDCDEFTT 446
D NKDG+VS EE+ + A K Q + F+ D + DG +D E+ T
Sbjct: 604 DDNKDGKVSWEEFKKAHFTHTEGKEDDKATKEQMAEDEAKFKYADVNGDGMLDLHEYVT 662
>SB_23227| Best HMM Match : efhand (HMM E-Value=4.8e-26)
Length = 776
Score = 31.5 bits (68), Expect = 0.76
Identities = 20/76 (26%), Positives = 41/76 (53%)
Frame = +3
Query: 90 KKLLYVFNVFFDVNQSGTIERKDFELAIEKICSLRGWKPGDQKNTETHEIMIKIWDGLRK 269
+KL + FN++ D++ +G I R++ ++ I + G K E K + + +
Sbjct: 99 QKLKWAFNMY-DLDGNGYISRQEMLEIVQAIYKMVG---SVMKMPEDESTPEKRTEKIFR 154
Query: 270 RADSNKDGQVSVEEWV 317
+ D N DG++S+EE++
Sbjct: 155 QMDKNLDGKLSLEEFI 170
>SB_5690| Best HMM Match : efhand (HMM E-Value=7.39998e-41)
Length = 153
Score = 31.1 bits (67), Expect = 1.00
Identities = 34/149 (22%), Positives = 71/149 (47%), Gaps = 3/149 (2%)
Frame = +3
Query: 120 FDVNQSGTIERKDFELAIEKICSLRGWKPGDQKNTETHEIMIKIWDGLRKRADSNKDGQV 299
FD + SGTI ++ E+ ++ + G P D+ E +++ + D++ +G+V
Sbjct: 9 FDKDGSGTISNEELEVVMKSL----GQNPSDE---ELQQMI--------QEVDADGNGEV 53
Query: 300 SVEEWVSMWNDYAXNPSAALKWQQLYCQFMFQLEDASADGTIDCDEFTTVCSSYG--IDP 473
EE+++M + A + ++ F++ D + DG+I E +V +S G +
Sbjct: 54 DFEEFLAMMKKQMQHRDAEAEMRE-----AFRVFDRNGDGSISEWELRSVMASLGEKLSD 108
Query: 474 NECK-MAFXKMAKGKHNVSWXEFQELWKE 557
+E K M G +++ EF ++ +E
Sbjct: 109 DEIKEMMREADLDGDGVINFQEFVQMVRE 137
>SB_2411| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 660
Score = 31.1 bits (67), Expect = 1.00
Identities = 23/69 (33%), Positives = 38/69 (55%), Gaps = 2/69 (2%)
Frame = +3
Query: 42 ENQ--TRDSKMSVSEFRRKKLLYVFNVFFDVNQSGTIERKDFELAIEKICSLRGWKPGDQ 215
ENQ TRDSK ++E + K+ FN FFD +Q+G +E +F+ + + K GD+
Sbjct: 500 ENQILTRDSK-GITEEQMKEFRASFN-FFDKDQTGKLEPNEFKQCLVSLG--YNIKEGDK 555
Query: 216 KNTETHEIM 242
+ E ++
Sbjct: 556 GDREFERLL 564
>SB_50582| Best HMM Match : Mito_carr (HMM E-Value=2.1e-23)
Length = 1026
Score = 30.7 bits (66), Expect = 1.3
Identities = 23/81 (28%), Positives = 38/81 (46%)
Frame = +3
Query: 207 GDQKNTETHEIMIKIWDGLRKRADSNKDGQVSVEEWVSMWNDYAXNPSAALKWQQLYCQF 386
G Q+ E +E +++ G+ D KDG +S E+V+ A L+ + +
Sbjct: 720 GMQRIEEYNETTLELLAGV---VDQTKDGLISFSEFVAF--------EALLRDPDSHHKL 768
Query: 387 MFQLEDASADGTIDCDEFTTV 449
+FQL D G++ DEF V
Sbjct: 769 IFQLFDLDGKGSVSYDEFRNV 789
>SB_31142| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 745
Score = 30.7 bits (66), Expect = 1.3
Identities = 31/115 (26%), Positives = 49/115 (42%), Gaps = 3/115 (2%)
Frame = +3
Query: 63 KMSVSEFR--RKKLLYVFNVFFDVNQSGTIERKDFELAIEKICSLRGWKPGDQKNTETHE 236
K S+ R +KL FN D++ G I +DF + +K+CSL + N E E
Sbjct: 35 KQCCSDLRLSEEKLAITFNEL-DLDGDGKISLEDFANSFQKVCSLFDVTQDEVLNQEKSE 93
Query: 237 IMIKIWDGLRKRAD-SNKDGQVSVEEWVSMWNDYAXNPSAALKWQQLYCQFMFQL 398
+ K D G +S +E+VS Y N + + + L F+F +
Sbjct: 94 -----YKKFEKLLDVIGVKGVLSGQEYVSELFHYMHNSNDSAQLLSLLESFLFSV 143
>SB_50451| Best HMM Match : Avirulence (HMM E-Value=0.14)
Length = 1085
Score = 29.9 bits (64), Expect = 2.3
Identities = 25/96 (26%), Positives = 38/96 (39%), Gaps = 3/96 (3%)
Frame = +1
Query: 325 GMTTLXTHQQL*NGSNSTANSCFNWKTLAPMGLSTVTNSPLFAPRTESTPTNARWLSXRW 504
G TT T N +N + L P G +T T +P P + L
Sbjct: 484 GTTTTTTTVPWNNNNNYYRPLEQQQQLLPPPGTTTTTTAPWNNNNNHYRPLEQQQLLLPS 543
Query: 505 P---RASTTCPGXSSRNYGRSTSLLXILMRPGTSSS 603
P +TT P ++ NY R +L+ PGT+++
Sbjct: 544 PGTTTTTTTVPWNNNNNYYRPLEQQQLLLPPGTTTT 579
>SB_39963| Best HMM Match : EGF (HMM E-Value=1.4e-13)
Length = 3035
Score = 29.5 bits (63), Expect = 3.0
Identities = 9/27 (33%), Positives = 17/27 (62%)
Frame = +3
Query: 429 CDEFTTVCSSYGIDPNECKMAFXKMAK 509
C E+T++C SY + P C M + + ++
Sbjct: 511 CTEYTSLCQSYSLMPVACSMDYQRFSE 537
>SB_25956| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1146
Score = 29.1 bits (62), Expect = 4.0
Identities = 18/70 (25%), Positives = 31/70 (44%)
Frame = +3
Query: 108 FNVFFDVNQSGTIERKDFELAIEKICSLRGWKPGDQKNTETHEIMIKIWDGLRKRADSNK 287
+N FD DF+ + K+ L K D E E + ++ + + D +K
Sbjct: 956 WNPLFDDENPDFFGADDFKKLLWKVTKLYNPKDEDYDPKERDEEISRMREHVMNEIDKDK 1015
Query: 288 DGQVSVEEWV 317
DG VS +E++
Sbjct: 1016 DGFVSQDEFL 1025
>SB_23228| Best HMM Match : efhand (HMM E-Value=6.8e-25)
Length = 190
Score = 29.1 bits (62), Expect = 4.0
Identities = 27/97 (27%), Positives = 46/97 (47%), Gaps = 3/97 (3%)
Frame = +3
Query: 213 QKNTETHEIMIKIW-DGLRKRADSNKDGQVSVEEWVSMWNDYAXNPSAALKWQQLYCQFM 389
+ NTE + ++ W G K + G ++VEE+ ++ ++ A+ + + +
Sbjct: 17 KNNTEFSDEELQEWYKGFLKDCPT---GHLTVEEFKKIYGNFFPYGDASK-----FAEHV 68
Query: 390 FQLEDASADGTIDCDEFTTVCS--SYGIDPNECKMAF 494
F+ DA+ DGTID EF S S G + K AF
Sbjct: 69 FRTFDANGDGTIDFREFICALSVTSRGKLEQKLKWAF 105
Score = 27.9 bits (59), Expect = 9.3
Identities = 19/76 (25%), Positives = 39/76 (51%)
Frame = +3
Query: 90 KKLLYVFNVFFDVNQSGTIERKDFELAIEKICSLRGWKPGDQKNTETHEIMIKIWDGLRK 269
+KL + F+++ D++ +G I R++ + I + G K E K D + +
Sbjct: 99 QKLKWAFSMY-DLDGNGYISRQEMLEIVRAIYKMVG---SVMKMPEDESTPEKRTDKIFR 154
Query: 270 RADSNKDGQVSVEEWV 317
+ D N DG++S+ E++
Sbjct: 155 QMDKNLDGKLSLAEFI 170
>SB_51340| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 4529
Score = 29.1 bits (62), Expect = 4.0
Identities = 14/46 (30%), Positives = 22/46 (47%)
Frame = -3
Query: 568 VEKYSFHSSWNSSQDTLCLPLAILXKAILHSLGSIPYEEQTVVNSS 431
+E S +S LC P +L A++H GS P+ Q +N +
Sbjct: 3739 LENIEAESVGDSVSLPLCEPKLLLTHALMHPYGSAPFNGQCTLNGT 3784
>SB_49196| Best HMM Match : efhand (HMM E-Value=3.4e-39)
Length = 659
Score = 29.1 bits (62), Expect = 4.0
Identities = 14/33 (42%), Positives = 17/33 (51%)
Frame = +3
Query: 390 FQLEDASADGTIDCDEFTTVCSSYGIDPNECKM 488
F L D DGTI E TV S G +P E ++
Sbjct: 6 FSLFDKDGDGTITTKELGTVMRSLGQNPTEAEL 38
>SB_44952| Best HMM Match : efhand (HMM E-Value=3.4e-39)
Length = 250
Score = 29.1 bits (62), Expect = 4.0
Identities = 14/33 (42%), Positives = 17/33 (51%)
Frame = +3
Query: 390 FQLEDASADGTIDCDEFTTVCSSYGIDPNECKM 488
F L D DGTI E TV S G +P E ++
Sbjct: 6 FSLFDKDGDGTITTKELGTVMRSLGQNPTEAEL 38
>SB_37673| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 97
Score = 29.1 bits (62), Expect = 4.0
Identities = 26/74 (35%), Positives = 33/74 (44%), Gaps = 9/74 (12%)
Frame = +3
Query: 117 FFDVNQSGTIE-RKDFELAIEKI-------CSLRGWK-PGDQKNTETHEIMIKIWDGLRK 269
F D N IE KDF+ + +K +R W P D E MIK
Sbjct: 11 FSDANNDAKIELEKDFDTSFDKNKDGKLDQTEIRHWLFPDDDMAKEEPAHMIK------- 63
Query: 270 RADSNKDGQVSVEE 311
AD NKDG++S+EE
Sbjct: 64 EADDNKDGKLSMEE 77
>SB_36414| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 299
Score = 29.1 bits (62), Expect = 4.0
Identities = 14/33 (42%), Positives = 17/33 (51%)
Frame = +3
Query: 390 FQLEDASADGTIDCDEFTTVCSSYGIDPNECKM 488
F L D DGTI E TV S G +P E ++
Sbjct: 17 FSLFDKDGDGTITTKELGTVMRSLGQNPTEAEL 49
>SB_55989| Best HMM Match : zf-C2H2 (HMM E-Value=8e-08)
Length = 1011
Score = 28.7 bits (61), Expect = 5.3
Identities = 14/43 (32%), Positives = 24/43 (55%)
Frame = +3
Query: 201 KPGDQKNTETHEIMIKIWDGLRKRADSNKDGQVSVEEWVSMWN 329
KPG + +TH + K W R +ADS+ G+ + + V ++N
Sbjct: 611 KPGSHLDPDTHCPLCKKWFNSRVQADSHYSGKAHLTQ-VDLYN 652
>SB_18162| Best HMM Match : E-MAP-115 (HMM E-Value=0.21)
Length = 659
Score = 28.3 bits (60), Expect = 7.0
Identities = 30/89 (33%), Positives = 40/89 (44%), Gaps = 7/89 (7%)
Frame = +1
Query: 391 FNWKTLAPMGLSTVTNSPLFAPRTEST------PTNARWLSXR-WPRASTTCPGXSSRNY 549
F+WKT AP L + +PL R EST T AR L R W R T P Y
Sbjct: 7 FSWKTPAPRRLRSPRRTPL--ARLESTVQRKTQSTEARPLYTRVWERPPTATP---EATY 61
Query: 550 GRSTSLLXILMRPGTSSSEELLFKIQAKT 636
R+ SL + S+ +E + +I+ T
Sbjct: 62 KRA-SLTRLRSETEGSAIQETIARIEFDT 89
>SB_2495| Best HMM Match : Pox_A_type_inc (HMM E-Value=8.2e-11)
Length = 2024
Score = 28.3 bits (60), Expect = 7.0
Identities = 21/78 (26%), Positives = 34/78 (43%)
Frame = -2
Query: 617 KSSSSEDEVPGRIRIXSREVXXXXXXXXXPGHVVLALGHLXESHLAFVGVDSVRGANSGE 438
+SS S +V +I + E + +A + +SHL+++G +S ANSG
Sbjct: 503 RSSKSVSDVKSQIDVLQHE------NSRLQSEITVAKKKITDSHLSYMGKESNEEANSGN 556
Query: 437 FVTVDSPIGASVFQLKHE 384
F I V K+E
Sbjct: 557 FEFESLQIDYDVAVKKNE 574
>SB_56102| Best HMM Match : Hormone_6 (HMM E-Value=2.6)
Length = 276
Score = 27.9 bits (59), Expect = 9.3
Identities = 17/56 (30%), Positives = 27/56 (48%), Gaps = 2/56 (3%)
Frame = -3
Query: 604 PKMKFPAALGSSVEKYSFHSSWNS--SQDTLCLPLAILXKAILHSLGSIPYEEQTV 443
P+M+ + GSS +Y FH + S + L +PL + K LH I + T+
Sbjct: 114 PEMRVGFSHGSSDSEYEFHLDIDPMVSMEKLNVPLMVRLKRSLHLFSLISSQMNTI 169
>SB_43842| Best HMM Match : RNB (HMM E-Value=0)
Length = 1238
Score = 27.9 bits (59), Expect = 9.3
Identities = 14/44 (31%), Positives = 24/44 (54%)
Frame = -3
Query: 583 ALGSSVEKYSFHSSWNSSQDTLCLPLAILXKAILHSLGSIPYEE 452
+L S+V++Y+F S W + D + K+I+ S S+ Y E
Sbjct: 805 SLRSNVDRYAFSSIWEMTPDADVISTK-FTKSIIRSKASLTYAE 847
>SB_27812| Best HMM Match : efhand (HMM E-Value=1.7e-07)
Length = 78
Score = 27.9 bits (59), Expect = 9.3
Identities = 11/32 (34%), Positives = 17/32 (53%)
Frame = +3
Query: 387 MFQLEDASADGTIDCDEFTTVCSSYGIDPNEC 482
+FQL D + DG + C EF + +P +C
Sbjct: 47 LFQLLDKNGDGAVTCGEFKKARDAPFAEPPKC 78
>SB_6795| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 266
Score = 27.9 bits (59), Expect = 9.3
Identities = 30/130 (23%), Positives = 54/130 (41%), Gaps = 14/130 (10%)
Frame = +3
Query: 168 AIEKICSLRGWKPGDQKNTETHEIMIKIWDGLRKRADSNKDGQ-------VSVEEWVSMW 326
A+ K+ + R +P ++ +I+ W K A +DG+ + + +S
Sbjct: 41 ALLKLATGRSLQPVKERTRAEKTAIIRYWRAKGKIAWGQEDGKDLLFFEGIRILR-ISEI 99
Query: 327 NDYAXNPSAALKWQQLY--CQFMFQLEDASADGTIDCDEFTTVCSSYGID-----PNECK 485
D +W+ + CQ + ED S+ + CD+ TT +S G P++
Sbjct: 100 KDAVEKKVRRCRWKNIAVSCQTASKSEDFSSVESTSCDKGTTAKTSRGTRKLSAVPDDVY 159
Query: 486 MAFXKMAKGK 515
A K+A GK
Sbjct: 160 DALLKLATGK 169
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,132,999
Number of Sequences: 59808
Number of extensions: 416122
Number of successful extensions: 1153
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 1056
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1152
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 2034222073
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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