BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= brP-0585 (750 letters) Database: nematostella 59,808 sequences; 16,821,457 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value SB_46583| Best HMM Match : Hus1 (HMM E-Value=0) 36 0.027 SB_23229| Best HMM Match : efhand (HMM E-Value=6.8e-25) 34 0.11 SB_43375| Best HMM Match : Pneumo_att_G (HMM E-Value=3.6) 33 0.33 SB_37671| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.43 SB_23227| Best HMM Match : efhand (HMM E-Value=4.8e-26) 31 0.76 SB_5690| Best HMM Match : efhand (HMM E-Value=7.39998e-41) 31 1.00 SB_2411| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.00 SB_50582| Best HMM Match : Mito_carr (HMM E-Value=2.1e-23) 31 1.3 SB_31142| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.3 SB_50451| Best HMM Match : Avirulence (HMM E-Value=0.14) 30 2.3 SB_39963| Best HMM Match : EGF (HMM E-Value=1.4e-13) 29 3.0 SB_25956| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.0 SB_23228| Best HMM Match : efhand (HMM E-Value=6.8e-25) 29 4.0 SB_51340| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.0 SB_49196| Best HMM Match : efhand (HMM E-Value=3.4e-39) 29 4.0 SB_44952| Best HMM Match : efhand (HMM E-Value=3.4e-39) 29 4.0 SB_37673| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.0 SB_36414| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.0 SB_55989| Best HMM Match : zf-C2H2 (HMM E-Value=8e-08) 29 5.3 SB_18162| Best HMM Match : E-MAP-115 (HMM E-Value=0.21) 28 7.0 SB_2495| Best HMM Match : Pox_A_type_inc (HMM E-Value=8.2e-11) 28 7.0 SB_56102| Best HMM Match : Hormone_6 (HMM E-Value=2.6) 28 9.3 SB_43842| Best HMM Match : RNB (HMM E-Value=0) 28 9.3 SB_27812| Best HMM Match : efhand (HMM E-Value=1.7e-07) 28 9.3 SB_6795| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.3 >SB_46583| Best HMM Match : Hus1 (HMM E-Value=0) Length = 646 Score = 36.3 bits (80), Expect = 0.027 Identities = 21/79 (26%), Positives = 35/79 (44%), Gaps = 3/79 (3%) Frame = +3 Query: 390 FQLEDASADGTIDCDEFTTVCSSYGIDPNECKMAFXKM---AKGKHNVSWXEFQELWKEY 560 F L D DG I+CD+ + S G++P ++ + KG VS+ EF ++ Sbjct: 520 FSLFDRVGDGKIECDQIGCLLRSLGLNPTGAEVKKIEKDVDPKGIARVSFEEFLPIYTSA 579 Query: 561 FSTXDPNAAGNFIFGRTTF 617 + +A F+ G F Sbjct: 580 YQKKQTGSADEFVEGLRVF 598 >SB_23229| Best HMM Match : efhand (HMM E-Value=6.8e-25) Length = 191 Score = 34.3 bits (75), Expect = 0.11 Identities = 30/97 (30%), Positives = 46/97 (47%), Gaps = 3/97 (3%) Frame = +3 Query: 213 QKNTETHEIMIKIW-DGLRKRADSNKDGQVSVEEWVSMWNDYAXNPSAALKWQQLYCQFM 389 + NTE E ++ W G K DG +SVEE+ ++ ++ A+ + + + Sbjct: 17 KNNTEFSETELQEWYKGFLKDCP---DGSLSVEEFKKIYGNFFPYGDASK-----FAEHV 68 Query: 390 FQLEDASADGTIDCDEFTTVCS--SYGIDPNECKMAF 494 F+ DA+ DGTID EF S S G + K AF Sbjct: 69 FRTFDANGDGTIDFREFICALSVTSRGKLEEKLKWAF 105 Score = 27.9 bits (59), Expect = 9.3 Identities = 19/76 (25%), Positives = 39/76 (51%) Frame = +3 Query: 90 KKLLYVFNVFFDVNQSGTIERKDFELAIEKICSLRGWKPGDQKNTETHEIMIKIWDGLRK 269 +KL + F+++ D++ +G I R++ + I + G K E K D + + Sbjct: 99 EKLKWAFSMY-DLDGNGYISRQEMLEIVRAIYKMVG---SVMKMPEDESTPEKRTDKIFR 154 Query: 270 RADSNKDGQVSVEEWV 317 + D N DG++S+ E++ Sbjct: 155 QMDKNLDGKLSLAEFI 170 >SB_43375| Best HMM Match : Pneumo_att_G (HMM E-Value=3.6) Length = 774 Score = 32.7 bits (71), Expect = 0.33 Identities = 25/81 (30%), Positives = 38/81 (46%) Frame = +1 Query: 361 NGSNSTANSCFNWKTLAPMGLSTVTNSPLFAPRTESTPTNARWLSXRWPRASTTCPGXSS 540 N ++S+++S N KT T+T +P TPTN +S STT P SS Sbjct: 47 NNNSSSSSSSSNKKTTPLCPPITLTQTPTSISNVTPTPTNINNIS------STTTPLDSS 100 Query: 541 RNYGRSTSLLXILMRPGTSSS 603 + +L + +RP S+S Sbjct: 101 ATTTTTPTLPIVTLRPPPSTS 121 >SB_37671| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 708 Score = 32.3 bits (70), Expect = 0.43 Identities = 19/59 (32%), Positives = 27/59 (45%), Gaps = 2/59 (3%) Frame = +3 Query: 276 DSNKDGQVSVEEW--VSMWNDYAXNPSAALKWQQLYCQFMFQLEDASADGTIDCDEFTT 446 D NKDG+VS EE+ + A K Q + F+ D + DG +D E+ T Sbjct: 604 DDNKDGKVSWEEFKKAHFTHTEGKEDDKATKEQMAEDEAKFKYADVNGDGMLDLHEYVT 662 >SB_23227| Best HMM Match : efhand (HMM E-Value=4.8e-26) Length = 776 Score = 31.5 bits (68), Expect = 0.76 Identities = 20/76 (26%), Positives = 41/76 (53%) Frame = +3 Query: 90 KKLLYVFNVFFDVNQSGTIERKDFELAIEKICSLRGWKPGDQKNTETHEIMIKIWDGLRK 269 +KL + FN++ D++ +G I R++ ++ I + G K E K + + + Sbjct: 99 QKLKWAFNMY-DLDGNGYISRQEMLEIVQAIYKMVG---SVMKMPEDESTPEKRTEKIFR 154 Query: 270 RADSNKDGQVSVEEWV 317 + D N DG++S+EE++ Sbjct: 155 QMDKNLDGKLSLEEFI 170 >SB_5690| Best HMM Match : efhand (HMM E-Value=7.39998e-41) Length = 153 Score = 31.1 bits (67), Expect = 1.00 Identities = 34/149 (22%), Positives = 71/149 (47%), Gaps = 3/149 (2%) Frame = +3 Query: 120 FDVNQSGTIERKDFELAIEKICSLRGWKPGDQKNTETHEIMIKIWDGLRKRADSNKDGQV 299 FD + SGTI ++ E+ ++ + G P D+ E +++ + D++ +G+V Sbjct: 9 FDKDGSGTISNEELEVVMKSL----GQNPSDE---ELQQMI--------QEVDADGNGEV 53 Query: 300 SVEEWVSMWNDYAXNPSAALKWQQLYCQFMFQLEDASADGTIDCDEFTTVCSSYG--IDP 473 EE+++M + A + ++ F++ D + DG+I E +V +S G + Sbjct: 54 DFEEFLAMMKKQMQHRDAEAEMRE-----AFRVFDRNGDGSISEWELRSVMASLGEKLSD 108 Query: 474 NECK-MAFXKMAKGKHNVSWXEFQELWKE 557 +E K M G +++ EF ++ +E Sbjct: 109 DEIKEMMREADLDGDGVINFQEFVQMVRE 137 >SB_2411| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 660 Score = 31.1 bits (67), Expect = 1.00 Identities = 23/69 (33%), Positives = 38/69 (55%), Gaps = 2/69 (2%) Frame = +3 Query: 42 ENQ--TRDSKMSVSEFRRKKLLYVFNVFFDVNQSGTIERKDFELAIEKICSLRGWKPGDQ 215 ENQ TRDSK ++E + K+ FN FFD +Q+G +E +F+ + + K GD+ Sbjct: 500 ENQILTRDSK-GITEEQMKEFRASFN-FFDKDQTGKLEPNEFKQCLVSLG--YNIKEGDK 555 Query: 216 KNTETHEIM 242 + E ++ Sbjct: 556 GDREFERLL 564 >SB_50582| Best HMM Match : Mito_carr (HMM E-Value=2.1e-23) Length = 1026 Score = 30.7 bits (66), Expect = 1.3 Identities = 23/81 (28%), Positives = 38/81 (46%) Frame = +3 Query: 207 GDQKNTETHEIMIKIWDGLRKRADSNKDGQVSVEEWVSMWNDYAXNPSAALKWQQLYCQF 386 G Q+ E +E +++ G+ D KDG +S E+V+ A L+ + + Sbjct: 720 GMQRIEEYNETTLELLAGV---VDQTKDGLISFSEFVAF--------EALLRDPDSHHKL 768 Query: 387 MFQLEDASADGTIDCDEFTTV 449 +FQL D G++ DEF V Sbjct: 769 IFQLFDLDGKGSVSYDEFRNV 789 >SB_31142| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 745 Score = 30.7 bits (66), Expect = 1.3 Identities = 31/115 (26%), Positives = 49/115 (42%), Gaps = 3/115 (2%) Frame = +3 Query: 63 KMSVSEFR--RKKLLYVFNVFFDVNQSGTIERKDFELAIEKICSLRGWKPGDQKNTETHE 236 K S+ R +KL FN D++ G I +DF + +K+CSL + N E E Sbjct: 35 KQCCSDLRLSEEKLAITFNEL-DLDGDGKISLEDFANSFQKVCSLFDVTQDEVLNQEKSE 93 Query: 237 IMIKIWDGLRKRAD-SNKDGQVSVEEWVSMWNDYAXNPSAALKWQQLYCQFMFQL 398 + K D G +S +E+VS Y N + + + L F+F + Sbjct: 94 -----YKKFEKLLDVIGVKGVLSGQEYVSELFHYMHNSNDSAQLLSLLESFLFSV 143 >SB_50451| Best HMM Match : Avirulence (HMM E-Value=0.14) Length = 1085 Score = 29.9 bits (64), Expect = 2.3 Identities = 25/96 (26%), Positives = 38/96 (39%), Gaps = 3/96 (3%) Frame = +1 Query: 325 GMTTLXTHQQL*NGSNSTANSCFNWKTLAPMGLSTVTNSPLFAPRTESTPTNARWLSXRW 504 G TT T N +N + L P G +T T +P P + L Sbjct: 484 GTTTTTTTVPWNNNNNYYRPLEQQQQLLPPPGTTTTTTAPWNNNNNHYRPLEQQQLLLPS 543 Query: 505 P---RASTTCPGXSSRNYGRSTSLLXILMRPGTSSS 603 P +TT P ++ NY R +L+ PGT+++ Sbjct: 544 PGTTTTTTTVPWNNNNNYYRPLEQQQLLLPPGTTTT 579 >SB_39963| Best HMM Match : EGF (HMM E-Value=1.4e-13) Length = 3035 Score = 29.5 bits (63), Expect = 3.0 Identities = 9/27 (33%), Positives = 17/27 (62%) Frame = +3 Query: 429 CDEFTTVCSSYGIDPNECKMAFXKMAK 509 C E+T++C SY + P C M + + ++ Sbjct: 511 CTEYTSLCQSYSLMPVACSMDYQRFSE 537 >SB_25956| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 1146 Score = 29.1 bits (62), Expect = 4.0 Identities = 18/70 (25%), Positives = 31/70 (44%) Frame = +3 Query: 108 FNVFFDVNQSGTIERKDFELAIEKICSLRGWKPGDQKNTETHEIMIKIWDGLRKRADSNK 287 +N FD DF+ + K+ L K D E E + ++ + + D +K Sbjct: 956 WNPLFDDENPDFFGADDFKKLLWKVTKLYNPKDEDYDPKERDEEISRMREHVMNEIDKDK 1015 Query: 288 DGQVSVEEWV 317 DG VS +E++ Sbjct: 1016 DGFVSQDEFL 1025 >SB_23228| Best HMM Match : efhand (HMM E-Value=6.8e-25) Length = 190 Score = 29.1 bits (62), Expect = 4.0 Identities = 27/97 (27%), Positives = 46/97 (47%), Gaps = 3/97 (3%) Frame = +3 Query: 213 QKNTETHEIMIKIW-DGLRKRADSNKDGQVSVEEWVSMWNDYAXNPSAALKWQQLYCQFM 389 + NTE + ++ W G K + G ++VEE+ ++ ++ A+ + + + Sbjct: 17 KNNTEFSDEELQEWYKGFLKDCPT---GHLTVEEFKKIYGNFFPYGDASK-----FAEHV 68 Query: 390 FQLEDASADGTIDCDEFTTVCS--SYGIDPNECKMAF 494 F+ DA+ DGTID EF S S G + K AF Sbjct: 69 FRTFDANGDGTIDFREFICALSVTSRGKLEQKLKWAF 105 Score = 27.9 bits (59), Expect = 9.3 Identities = 19/76 (25%), Positives = 39/76 (51%) Frame = +3 Query: 90 KKLLYVFNVFFDVNQSGTIERKDFELAIEKICSLRGWKPGDQKNTETHEIMIKIWDGLRK 269 +KL + F+++ D++ +G I R++ + I + G K E K D + + Sbjct: 99 QKLKWAFSMY-DLDGNGYISRQEMLEIVRAIYKMVG---SVMKMPEDESTPEKRTDKIFR 154 Query: 270 RADSNKDGQVSVEEWV 317 + D N DG++S+ E++ Sbjct: 155 QMDKNLDGKLSLAEFI 170 >SB_51340| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 4529 Score = 29.1 bits (62), Expect = 4.0 Identities = 14/46 (30%), Positives = 22/46 (47%) Frame = -3 Query: 568 VEKYSFHSSWNSSQDTLCLPLAILXKAILHSLGSIPYEEQTVVNSS 431 +E S +S LC P +L A++H GS P+ Q +N + Sbjct: 3739 LENIEAESVGDSVSLPLCEPKLLLTHALMHPYGSAPFNGQCTLNGT 3784 >SB_49196| Best HMM Match : efhand (HMM E-Value=3.4e-39) Length = 659 Score = 29.1 bits (62), Expect = 4.0 Identities = 14/33 (42%), Positives = 17/33 (51%) Frame = +3 Query: 390 FQLEDASADGTIDCDEFTTVCSSYGIDPNECKM 488 F L D DGTI E TV S G +P E ++ Sbjct: 6 FSLFDKDGDGTITTKELGTVMRSLGQNPTEAEL 38 >SB_44952| Best HMM Match : efhand (HMM E-Value=3.4e-39) Length = 250 Score = 29.1 bits (62), Expect = 4.0 Identities = 14/33 (42%), Positives = 17/33 (51%) Frame = +3 Query: 390 FQLEDASADGTIDCDEFTTVCSSYGIDPNECKM 488 F L D DGTI E TV S G +P E ++ Sbjct: 6 FSLFDKDGDGTITTKELGTVMRSLGQNPTEAEL 38 >SB_37673| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 97 Score = 29.1 bits (62), Expect = 4.0 Identities = 26/74 (35%), Positives = 33/74 (44%), Gaps = 9/74 (12%) Frame = +3 Query: 117 FFDVNQSGTIE-RKDFELAIEKI-------CSLRGWK-PGDQKNTETHEIMIKIWDGLRK 269 F D N IE KDF+ + +K +R W P D E MIK Sbjct: 11 FSDANNDAKIELEKDFDTSFDKNKDGKLDQTEIRHWLFPDDDMAKEEPAHMIK------- 63 Query: 270 RADSNKDGQVSVEE 311 AD NKDG++S+EE Sbjct: 64 EADDNKDGKLSMEE 77 >SB_36414| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 299 Score = 29.1 bits (62), Expect = 4.0 Identities = 14/33 (42%), Positives = 17/33 (51%) Frame = +3 Query: 390 FQLEDASADGTIDCDEFTTVCSSYGIDPNECKM 488 F L D DGTI E TV S G +P E ++ Sbjct: 17 FSLFDKDGDGTITTKELGTVMRSLGQNPTEAEL 49 >SB_55989| Best HMM Match : zf-C2H2 (HMM E-Value=8e-08) Length = 1011 Score = 28.7 bits (61), Expect = 5.3 Identities = 14/43 (32%), Positives = 24/43 (55%) Frame = +3 Query: 201 KPGDQKNTETHEIMIKIWDGLRKRADSNKDGQVSVEEWVSMWN 329 KPG + +TH + K W R +ADS+ G+ + + V ++N Sbjct: 611 KPGSHLDPDTHCPLCKKWFNSRVQADSHYSGKAHLTQ-VDLYN 652 >SB_18162| Best HMM Match : E-MAP-115 (HMM E-Value=0.21) Length = 659 Score = 28.3 bits (60), Expect = 7.0 Identities = 30/89 (33%), Positives = 40/89 (44%), Gaps = 7/89 (7%) Frame = +1 Query: 391 FNWKTLAPMGLSTVTNSPLFAPRTEST------PTNARWLSXR-WPRASTTCPGXSSRNY 549 F+WKT AP L + +PL R EST T AR L R W R T P Y Sbjct: 7 FSWKTPAPRRLRSPRRTPL--ARLESTVQRKTQSTEARPLYTRVWERPPTATP---EATY 61 Query: 550 GRSTSLLXILMRPGTSSSEELLFKIQAKT 636 R+ SL + S+ +E + +I+ T Sbjct: 62 KRA-SLTRLRSETEGSAIQETIARIEFDT 89 >SB_2495| Best HMM Match : Pox_A_type_inc (HMM E-Value=8.2e-11) Length = 2024 Score = 28.3 bits (60), Expect = 7.0 Identities = 21/78 (26%), Positives = 34/78 (43%) Frame = -2 Query: 617 KSSSSEDEVPGRIRIXSREVXXXXXXXXXPGHVVLALGHLXESHLAFVGVDSVRGANSGE 438 +SS S +V +I + E + +A + +SHL+++G +S ANSG Sbjct: 503 RSSKSVSDVKSQIDVLQHE------NSRLQSEITVAKKKITDSHLSYMGKESNEEANSGN 556 Query: 437 FVTVDSPIGASVFQLKHE 384 F I V K+E Sbjct: 557 FEFESLQIDYDVAVKKNE 574 >SB_56102| Best HMM Match : Hormone_6 (HMM E-Value=2.6) Length = 276 Score = 27.9 bits (59), Expect = 9.3 Identities = 17/56 (30%), Positives = 27/56 (48%), Gaps = 2/56 (3%) Frame = -3 Query: 604 PKMKFPAALGSSVEKYSFHSSWNS--SQDTLCLPLAILXKAILHSLGSIPYEEQTV 443 P+M+ + GSS +Y FH + S + L +PL + K LH I + T+ Sbjct: 114 PEMRVGFSHGSSDSEYEFHLDIDPMVSMEKLNVPLMVRLKRSLHLFSLISSQMNTI 169 >SB_43842| Best HMM Match : RNB (HMM E-Value=0) Length = 1238 Score = 27.9 bits (59), Expect = 9.3 Identities = 14/44 (31%), Positives = 24/44 (54%) Frame = -3 Query: 583 ALGSSVEKYSFHSSWNSSQDTLCLPLAILXKAILHSLGSIPYEE 452 +L S+V++Y+F S W + D + K+I+ S S+ Y E Sbjct: 805 SLRSNVDRYAFSSIWEMTPDADVISTK-FTKSIIRSKASLTYAE 847 >SB_27812| Best HMM Match : efhand (HMM E-Value=1.7e-07) Length = 78 Score = 27.9 bits (59), Expect = 9.3 Identities = 11/32 (34%), Positives = 17/32 (53%) Frame = +3 Query: 387 MFQLEDASADGTIDCDEFTTVCSSYGIDPNEC 482 +FQL D + DG + C EF + +P +C Sbjct: 47 LFQLLDKNGDGAVTCGEFKKARDAPFAEPPKC 78 >SB_6795| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 266 Score = 27.9 bits (59), Expect = 9.3 Identities = 30/130 (23%), Positives = 54/130 (41%), Gaps = 14/130 (10%) Frame = +3 Query: 168 AIEKICSLRGWKPGDQKNTETHEIMIKIWDGLRKRADSNKDGQ-------VSVEEWVSMW 326 A+ K+ + R +P ++ +I+ W K A +DG+ + + +S Sbjct: 41 ALLKLATGRSLQPVKERTRAEKTAIIRYWRAKGKIAWGQEDGKDLLFFEGIRILR-ISEI 99 Query: 327 NDYAXNPSAALKWQQLY--CQFMFQLEDASADGTIDCDEFTTVCSSYGID-----PNECK 485 D +W+ + CQ + ED S+ + CD+ TT +S G P++ Sbjct: 100 KDAVEKKVRRCRWKNIAVSCQTASKSEDFSSVESTSCDKGTTAKTSRGTRKLSAVPDDVY 159 Query: 486 MAFXKMAKGK 515 A K+A GK Sbjct: 160 DALLKLATGK 169 Database: nematostella Posted date: Oct 22, 2007 1:22 PM Number of letters in database: 16,821,457 Number of sequences in database: 59,808 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 21,132,999 Number of Sequences: 59808 Number of extensions: 416122 Number of successful extensions: 1153 Number of sequences better than 10.0: 25 Number of HSP's better than 10.0 without gapping: 1056 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1152 length of database: 16,821,457 effective HSP length: 80 effective length of database: 12,036,817 effective search space used: 2034222073 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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