Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brP-0585
         (750 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF017062-1|AAC47144.2|  649|Anopheles gambiae soluble guanylyl c...    25   3.3  
CR954257-3|CAJ14154.1|  277|Anopheles gambiae predicted protein ...    24   4.4  
AB090816-1|BAC57907.1|  455|Anopheles gambiae gag-like protein p...    24   5.8  
AJ439353-11|CAD27933.1|  615|Anopheles gambiae 30E5.11 protein.        23   7.6  
AJ271193-1|CAB66001.1| 1623|Anopheles gambiae laminin gamma 1 pr...    23   7.6  

>AF017062-1|AAC47144.2|  649|Anopheles gambiae soluble guanylyl
           cyclase beta subunit protein.
          Length = 649

 Score = 24.6 bits (51), Expect = 3.3
 Identities = 8/23 (34%), Positives = 15/23 (65%)
 Frame = +3

Query: 243 IKIWDGLRKRADSNKDGQVSVEE 311
           + IW+ ++K+A  N +GQ  V +
Sbjct: 18  LNIWEQIKKKAQVNMEGQFLVRQ 40


>CR954257-3|CAJ14154.1|  277|Anopheles gambiae predicted protein
           protein.
          Length = 277

 Score = 24.2 bits (50), Expect = 4.4
 Identities = 12/48 (25%), Positives = 18/48 (37%)
 Frame = +3

Query: 456 SYGIDPNECKMAFXKMAKGKHNVSWXEFQELWKEYFSTXDPNAAGNFI 599
           S G D  +C     +     H+ SW  F     + F+   PN    F+
Sbjct: 123 SVGTDTRDCTPKTPEYTLSNHHDSWGTFVYPQTQTFARNRPNVRYTFL 170


>AB090816-1|BAC57907.1|  455|Anopheles gambiae gag-like protein
           protein.
          Length = 455

 Score = 23.8 bits (49), Expect = 5.8
 Identities = 12/32 (37%), Positives = 18/32 (56%)
 Frame = +2

Query: 71  RLRIQKEEASVRVQRVLRRQPERNH*EERLRV 166
           +LR Q+E+A  R +   RR+       E+LRV
Sbjct: 69  KLREQREDAQRREEEARRREEAAKADNEKLRV 100


>AJ439353-11|CAD27933.1|  615|Anopheles gambiae 30E5.11 protein.
          Length = 615

 Score = 23.4 bits (48), Expect = 7.6
 Identities = 16/66 (24%), Positives = 30/66 (45%)
 Frame = +3

Query: 186 SLRGWKPGDQKNTETHEIMIKIWDGLRKRADSNKDGQVSVEEWVSMWNDYAXNPSAALKW 365
           S+R  + GD+++    E+  +      + + +NK   +S  +W  MW       S A K 
Sbjct: 41  SIRHGRNGDKRSRMIKELYQQTEPKSHRPSYANKAVLLSSAKWEQMWKKVV---SPAEKE 97

Query: 366 QQLYCQ 383
            ++ CQ
Sbjct: 98  TEVLCQ 103


>AJ271193-1|CAB66001.1| 1623|Anopheles gambiae laminin gamma 1
           precursor protein.
          Length = 1623

 Score = 23.4 bits (48), Expect = 7.6
 Identities = 11/30 (36%), Positives = 14/30 (46%), Gaps = 1/30 (3%)
 Frame = +3

Query: 399 EDASADGTIDCDEFTTVCS-SYGIDPNECK 485
           E  S D T  CD  T VCS    ++   C+
Sbjct: 448 ERGSLDNTPSCDPVTGVCSCKENVEGRHCR 477


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 704,041
Number of Sequences: 2352
Number of extensions: 13862
Number of successful extensions: 28
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 28
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 28
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 77339358
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)