BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= brP-0585 (750 letters) Database: bee 438 sequences; 146,343 total letters Searching......................................................done Score E Sequences producing significant alignments: (bits) Value DQ667181-1|ABG75733.1| 445|Apis mellifera GABA-gated chloride c... 25 1.0 DQ325094-1|ABD14108.1| 175|Apis mellifera complementary sex det... 24 1.3 DQ325093-1|ABD14107.1| 175|Apis mellifera complementary sex det... 24 1.3 DQ325092-1|ABD14106.1| 175|Apis mellifera complementary sex det... 24 1.3 DQ325091-1|ABD14105.1| 175|Apis mellifera complementary sex det... 24 1.3 AY569710-1|AAS86663.1| 408|Apis mellifera complementary sex det... 24 1.3 AY569709-1|AAS86662.1| 408|Apis mellifera complementary sex det... 24 1.3 AY569708-1|AAS86661.1| 408|Apis mellifera complementary sex det... 24 1.3 AY569707-1|AAS86660.1| 408|Apis mellifera complementary sex det... 24 1.3 AY569706-1|AAS86659.1| 397|Apis mellifera complementary sex det... 24 1.3 DQ667182-1|ABG75734.1| 445|Apis mellifera GABA-gated chloride c... 23 2.3 AY569694-1|AAS86647.1| 400|Apis mellifera complementary sex det... 23 3.1 AF213012-1|AAG43568.1| 492|Apis mellifera acetylcholinesterase ... 23 3.1 AB181702-1|BAE06051.1| 628|Apis mellifera acetylcholinesterase ... 23 3.1 AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase... 22 7.1 DQ325109-1|ABD14123.1| 177|Apis mellifera complementary sex det... 21 9.3 DQ325108-1|ABD14122.1| 177|Apis mellifera complementary sex det... 21 9.3 DQ325106-1|ABD14120.1| 177|Apis mellifera complementary sex det... 21 9.3 AY350615-1|AAQ57657.1| 410|Apis mellifera complementary sex det... 21 9.3 AB267886-1|BAF46356.1| 567|Apis mellifera ecdysteroid receptor ... 21 9.3 >DQ667181-1|ABG75733.1| 445|Apis mellifera GABA-gated chloride channel protein. Length = 445 Score = 24.6 bits (51), Expect = 1.0 Identities = 10/29 (34%), Positives = 17/29 (58%) Frame = -2 Query: 305 YGNLPILVGISSFPQSIPDLDHDLMSFSV 219 YG P+ VG++ + SI + LM F++ Sbjct: 31 YGGPPVEVGVTMYVLSISSVSEVLMDFTL 59 >DQ325094-1|ABD14108.1| 175|Apis mellifera complementary sex determiner protein. Length = 175 Score = 24.2 bits (50), Expect = 1.3 Identities = 6/19 (31%), Positives = 13/19 (68%) Frame = -2 Query: 347 WVXSVVIPHRYPLFYGNLP 291 ++ + +P +P++YGN P Sbjct: 107 YIEQIPVPVPFPVYYGNFP 125 >DQ325093-1|ABD14107.1| 175|Apis mellifera complementary sex determiner protein. Length = 175 Score = 24.2 bits (50), Expect = 1.3 Identities = 6/19 (31%), Positives = 13/19 (68%) Frame = -2 Query: 347 WVXSVVIPHRYPLFYGNLP 291 ++ + +P +P++YGN P Sbjct: 107 YIEQIPVPVPFPVYYGNFP 125 >DQ325092-1|ABD14106.1| 175|Apis mellifera complementary sex determiner protein. Length = 175 Score = 24.2 bits (50), Expect = 1.3 Identities = 6/19 (31%), Positives = 13/19 (68%) Frame = -2 Query: 347 WVXSVVIPHRYPLFYGNLP 291 ++ + +P +P++YGN P Sbjct: 107 YIEQIPVPVPFPVYYGNFP 125 >DQ325091-1|ABD14105.1| 175|Apis mellifera complementary sex determiner protein. Length = 175 Score = 24.2 bits (50), Expect = 1.3 Identities = 6/19 (31%), Positives = 13/19 (68%) Frame = -2 Query: 347 WVXSVVIPHRYPLFYGNLP 291 ++ + +P +P++YGN P Sbjct: 107 YIEQIPVPVPFPVYYGNFP 125 >AY569710-1|AAS86663.1| 408|Apis mellifera complementary sex determiner protein. Length = 408 Score = 24.2 bits (50), Expect = 1.3 Identities = 6/19 (31%), Positives = 13/19 (68%) Frame = -2 Query: 347 WVXSVVIPHRYPLFYGNLP 291 ++ + +P +P++YGN P Sbjct: 340 YIEQIPVPVPFPVYYGNFP 358 >AY569709-1|AAS86662.1| 408|Apis mellifera complementary sex determiner protein. Length = 408 Score = 24.2 bits (50), Expect = 1.3 Identities = 6/19 (31%), Positives = 13/19 (68%) Frame = -2 Query: 347 WVXSVVIPHRYPLFYGNLP 291 ++ + +P +P++YGN P Sbjct: 340 YIEQIPVPVPFPVYYGNFP 358 >AY569708-1|AAS86661.1| 408|Apis mellifera complementary sex determiner protein. Length = 408 Score = 24.2 bits (50), Expect = 1.3 Identities = 6/19 (31%), Positives = 13/19 (68%) Frame = -2 Query: 347 WVXSVVIPHRYPLFYGNLP 291 ++ + +P +P++YGN P Sbjct: 340 YIEQIPVPVPFPVYYGNFP 358 >AY569707-1|AAS86660.1| 408|Apis mellifera complementary sex determiner protein. Length = 408 Score = 24.2 bits (50), Expect = 1.3 Identities = 6/19 (31%), Positives = 13/19 (68%) Frame = -2 Query: 347 WVXSVVIPHRYPLFYGNLP 291 ++ + +P +P++YGN P Sbjct: 340 YIEQIPVPVPFPVYYGNFP 358 >AY569706-1|AAS86659.1| 397|Apis mellifera complementary sex determiner protein. Length = 397 Score = 24.2 bits (50), Expect = 1.3 Identities = 6/19 (31%), Positives = 13/19 (68%) Frame = -2 Query: 347 WVXSVVIPHRYPLFYGNLP 291 ++ + +P +P++YGN P Sbjct: 329 YIEQIPVPVPFPVYYGNFP 347 >DQ667182-1|ABG75734.1| 445|Apis mellifera GABA-gated chloride channel protein. Length = 445 Score = 23.4 bits (48), Expect = 2.3 Identities = 10/29 (34%), Positives = 16/29 (55%) Frame = -2 Query: 305 YGNLPILVGISSFPQSIPDLDHDLMSFSV 219 YG P+ VG++ + SI L M F++ Sbjct: 31 YGGPPVEVGVTMYVLSISSLSEVKMDFTL 59 >AY569694-1|AAS86647.1| 400|Apis mellifera complementary sex determiner protein. Length = 400 Score = 23.0 bits (47), Expect = 3.1 Identities = 6/19 (31%), Positives = 12/19 (63%) Frame = -2 Query: 347 WVXSVVIPHRYPLFYGNLP 291 ++ + +P P++YGN P Sbjct: 332 YIEQIPVPVPVPIYYGNFP 350 >AF213012-1|AAG43568.1| 492|Apis mellifera acetylcholinesterase protein. Length = 492 Score = 23.0 bits (47), Expect = 3.1 Identities = 9/22 (40%), Positives = 15/22 (68%) Frame = +3 Query: 96 LLYVFNVFFDVNQSGTIERKDF 161 +LY FN F+ +Q+ +ER+ F Sbjct: 387 ILYDFNDIFEKDQASFLERERF 408 >AB181702-1|BAE06051.1| 628|Apis mellifera acetylcholinesterase protein. Length = 628 Score = 23.0 bits (47), Expect = 3.1 Identities = 9/22 (40%), Positives = 15/22 (68%) Frame = +3 Query: 96 LLYVFNVFFDVNQSGTIERKDF 161 +LY FN F+ +Q+ +ER+ F Sbjct: 387 ILYDFNDIFEKDQASFLERERF 408 >AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase protein. Length = 1143 Score = 21.8 bits (44), Expect = 7.1 Identities = 9/24 (37%), Positives = 16/24 (66%) Frame = -3 Query: 124 SKNTLNTYRSFFLLNSETDIFESR 53 +K +L T +SF NS+T++ S+ Sbjct: 554 NKISLATSKSFIKANSQTEVSNSK 577 >DQ325109-1|ABD14123.1| 177|Apis mellifera complementary sex determiner protein. Length = 177 Score = 21.4 bits (43), Expect = 9.3 Identities = 7/15 (46%), Positives = 10/15 (66%) Frame = -2 Query: 335 VVIPHRYPLFYGNLP 291 V +P P++YGN P Sbjct: 113 VPVPVPVPVYYGNFP 127 >DQ325108-1|ABD14122.1| 177|Apis mellifera complementary sex determiner protein. Length = 177 Score = 21.4 bits (43), Expect = 9.3 Identities = 7/15 (46%), Positives = 10/15 (66%) Frame = -2 Query: 335 VVIPHRYPLFYGNLP 291 V +P P++YGN P Sbjct: 113 VPVPVPVPVYYGNFP 127 >DQ325106-1|ABD14120.1| 177|Apis mellifera complementary sex determiner protein. Length = 177 Score = 21.4 bits (43), Expect = 9.3 Identities = 7/15 (46%), Positives = 10/15 (66%) Frame = -2 Query: 335 VVIPHRYPLFYGNLP 291 V +P P++YGN P Sbjct: 113 VPVPVPVPVYYGNFP 127 >AY350615-1|AAQ57657.1| 410|Apis mellifera complementary sex determiner protein. Length = 410 Score = 21.4 bits (43), Expect = 9.3 Identities = 7/15 (46%), Positives = 10/15 (66%) Frame = -2 Query: 335 VVIPHRYPLFYGNLP 291 V +P P++YGN P Sbjct: 346 VPVPVPVPVYYGNFP 360 >AB267886-1|BAF46356.1| 567|Apis mellifera ecdysteroid receptor A isoform protein. Length = 567 Score = 21.4 bits (43), Expect = 9.3 Identities = 9/28 (32%), Positives = 16/28 (57%) Frame = +3 Query: 291 GQVSVEEWVSMWNDYAXNPSAALKWQQL 374 G ++W++ N +PSAAL+ Q + Sbjct: 81 GAARSDDWLANANSPVGSPSAALQPQHV 108 Database: bee Posted date: Oct 23, 2007 1:17 PM Number of letters in database: 146,343 Number of sequences in database: 438 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 188,032 Number of Sequences: 438 Number of extensions: 3526 Number of successful extensions: 38 Number of sequences better than 10.0: 20 Number of HSP's better than 10.0 without gapping: 38 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 38 length of database: 146,343 effective HSP length: 56 effective length of database: 121,815 effective search space used: 23510295 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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