Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brP-0585
(750 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ667181-1|ABG75733.1| 445|Apis mellifera GABA-gated chloride c... 25 1.0
DQ325094-1|ABD14108.1| 175|Apis mellifera complementary sex det... 24 1.3
DQ325093-1|ABD14107.1| 175|Apis mellifera complementary sex det... 24 1.3
DQ325092-1|ABD14106.1| 175|Apis mellifera complementary sex det... 24 1.3
DQ325091-1|ABD14105.1| 175|Apis mellifera complementary sex det... 24 1.3
AY569710-1|AAS86663.1| 408|Apis mellifera complementary sex det... 24 1.3
AY569709-1|AAS86662.1| 408|Apis mellifera complementary sex det... 24 1.3
AY569708-1|AAS86661.1| 408|Apis mellifera complementary sex det... 24 1.3
AY569707-1|AAS86660.1| 408|Apis mellifera complementary sex det... 24 1.3
AY569706-1|AAS86659.1| 397|Apis mellifera complementary sex det... 24 1.3
DQ667182-1|ABG75734.1| 445|Apis mellifera GABA-gated chloride c... 23 2.3
AY569694-1|AAS86647.1| 400|Apis mellifera complementary sex det... 23 3.1
AF213012-1|AAG43568.1| 492|Apis mellifera acetylcholinesterase ... 23 3.1
AB181702-1|BAE06051.1| 628|Apis mellifera acetylcholinesterase ... 23 3.1
AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase... 22 7.1
DQ325109-1|ABD14123.1| 177|Apis mellifera complementary sex det... 21 9.3
DQ325108-1|ABD14122.1| 177|Apis mellifera complementary sex det... 21 9.3
DQ325106-1|ABD14120.1| 177|Apis mellifera complementary sex det... 21 9.3
AY350615-1|AAQ57657.1| 410|Apis mellifera complementary sex det... 21 9.3
AB267886-1|BAF46356.1| 567|Apis mellifera ecdysteroid receptor ... 21 9.3
>DQ667181-1|ABG75733.1| 445|Apis mellifera GABA-gated chloride
channel protein.
Length = 445
Score = 24.6 bits (51), Expect = 1.0
Identities = 10/29 (34%), Positives = 17/29 (58%)
Frame = -2
Query: 305 YGNLPILVGISSFPQSIPDLDHDLMSFSV 219
YG P+ VG++ + SI + LM F++
Sbjct: 31 YGGPPVEVGVTMYVLSISSVSEVLMDFTL 59
>DQ325094-1|ABD14108.1| 175|Apis mellifera complementary sex
determiner protein.
Length = 175
Score = 24.2 bits (50), Expect = 1.3
Identities = 6/19 (31%), Positives = 13/19 (68%)
Frame = -2
Query: 347 WVXSVVIPHRYPLFYGNLP 291
++ + +P +P++YGN P
Sbjct: 107 YIEQIPVPVPFPVYYGNFP 125
>DQ325093-1|ABD14107.1| 175|Apis mellifera complementary sex
determiner protein.
Length = 175
Score = 24.2 bits (50), Expect = 1.3
Identities = 6/19 (31%), Positives = 13/19 (68%)
Frame = -2
Query: 347 WVXSVVIPHRYPLFYGNLP 291
++ + +P +P++YGN P
Sbjct: 107 YIEQIPVPVPFPVYYGNFP 125
>DQ325092-1|ABD14106.1| 175|Apis mellifera complementary sex
determiner protein.
Length = 175
Score = 24.2 bits (50), Expect = 1.3
Identities = 6/19 (31%), Positives = 13/19 (68%)
Frame = -2
Query: 347 WVXSVVIPHRYPLFYGNLP 291
++ + +P +P++YGN P
Sbjct: 107 YIEQIPVPVPFPVYYGNFP 125
>DQ325091-1|ABD14105.1| 175|Apis mellifera complementary sex
determiner protein.
Length = 175
Score = 24.2 bits (50), Expect = 1.3
Identities = 6/19 (31%), Positives = 13/19 (68%)
Frame = -2
Query: 347 WVXSVVIPHRYPLFYGNLP 291
++ + +P +P++YGN P
Sbjct: 107 YIEQIPVPVPFPVYYGNFP 125
>AY569710-1|AAS86663.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 24.2 bits (50), Expect = 1.3
Identities = 6/19 (31%), Positives = 13/19 (68%)
Frame = -2
Query: 347 WVXSVVIPHRYPLFYGNLP 291
++ + +P +P++YGN P
Sbjct: 340 YIEQIPVPVPFPVYYGNFP 358
>AY569709-1|AAS86662.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 24.2 bits (50), Expect = 1.3
Identities = 6/19 (31%), Positives = 13/19 (68%)
Frame = -2
Query: 347 WVXSVVIPHRYPLFYGNLP 291
++ + +P +P++YGN P
Sbjct: 340 YIEQIPVPVPFPVYYGNFP 358
>AY569708-1|AAS86661.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 24.2 bits (50), Expect = 1.3
Identities = 6/19 (31%), Positives = 13/19 (68%)
Frame = -2
Query: 347 WVXSVVIPHRYPLFYGNLP 291
++ + +P +P++YGN P
Sbjct: 340 YIEQIPVPVPFPVYYGNFP 358
>AY569707-1|AAS86660.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 24.2 bits (50), Expect = 1.3
Identities = 6/19 (31%), Positives = 13/19 (68%)
Frame = -2
Query: 347 WVXSVVIPHRYPLFYGNLP 291
++ + +P +P++YGN P
Sbjct: 340 YIEQIPVPVPFPVYYGNFP 358
>AY569706-1|AAS86659.1| 397|Apis mellifera complementary sex
determiner protein.
Length = 397
Score = 24.2 bits (50), Expect = 1.3
Identities = 6/19 (31%), Positives = 13/19 (68%)
Frame = -2
Query: 347 WVXSVVIPHRYPLFYGNLP 291
++ + +P +P++YGN P
Sbjct: 329 YIEQIPVPVPFPVYYGNFP 347
>DQ667182-1|ABG75734.1| 445|Apis mellifera GABA-gated chloride
channel protein.
Length = 445
Score = 23.4 bits (48), Expect = 2.3
Identities = 10/29 (34%), Positives = 16/29 (55%)
Frame = -2
Query: 305 YGNLPILVGISSFPQSIPDLDHDLMSFSV 219
YG P+ VG++ + SI L M F++
Sbjct: 31 YGGPPVEVGVTMYVLSISSLSEVKMDFTL 59
>AY569694-1|AAS86647.1| 400|Apis mellifera complementary sex
determiner protein.
Length = 400
Score = 23.0 bits (47), Expect = 3.1
Identities = 6/19 (31%), Positives = 12/19 (63%)
Frame = -2
Query: 347 WVXSVVIPHRYPLFYGNLP 291
++ + +P P++YGN P
Sbjct: 332 YIEQIPVPVPVPIYYGNFP 350
>AF213012-1|AAG43568.1| 492|Apis mellifera acetylcholinesterase
protein.
Length = 492
Score = 23.0 bits (47), Expect = 3.1
Identities = 9/22 (40%), Positives = 15/22 (68%)
Frame = +3
Query: 96 LLYVFNVFFDVNQSGTIERKDF 161
+LY FN F+ +Q+ +ER+ F
Sbjct: 387 ILYDFNDIFEKDQASFLERERF 408
>AB181702-1|BAE06051.1| 628|Apis mellifera acetylcholinesterase
protein.
Length = 628
Score = 23.0 bits (47), Expect = 3.1
Identities = 9/22 (40%), Positives = 15/22 (68%)
Frame = +3
Query: 96 LLYVFNVFFDVNQSGTIERKDF 161
+LY FN F+ +Q+ +ER+ F
Sbjct: 387 ILYDFNDIFEKDQASFLERERF 408
>AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase
protein.
Length = 1143
Score = 21.8 bits (44), Expect = 7.1
Identities = 9/24 (37%), Positives = 16/24 (66%)
Frame = -3
Query: 124 SKNTLNTYRSFFLLNSETDIFESR 53
+K +L T +SF NS+T++ S+
Sbjct: 554 NKISLATSKSFIKANSQTEVSNSK 577
>DQ325109-1|ABD14123.1| 177|Apis mellifera complementary sex
determiner protein.
Length = 177
Score = 21.4 bits (43), Expect = 9.3
Identities = 7/15 (46%), Positives = 10/15 (66%)
Frame = -2
Query: 335 VVIPHRYPLFYGNLP 291
V +P P++YGN P
Sbjct: 113 VPVPVPVPVYYGNFP 127
>DQ325108-1|ABD14122.1| 177|Apis mellifera complementary sex
determiner protein.
Length = 177
Score = 21.4 bits (43), Expect = 9.3
Identities = 7/15 (46%), Positives = 10/15 (66%)
Frame = -2
Query: 335 VVIPHRYPLFYGNLP 291
V +P P++YGN P
Sbjct: 113 VPVPVPVPVYYGNFP 127
>DQ325106-1|ABD14120.1| 177|Apis mellifera complementary sex
determiner protein.
Length = 177
Score = 21.4 bits (43), Expect = 9.3
Identities = 7/15 (46%), Positives = 10/15 (66%)
Frame = -2
Query: 335 VVIPHRYPLFYGNLP 291
V +P P++YGN P
Sbjct: 113 VPVPVPVPVYYGNFP 127
>AY350615-1|AAQ57657.1| 410|Apis mellifera complementary sex
determiner protein.
Length = 410
Score = 21.4 bits (43), Expect = 9.3
Identities = 7/15 (46%), Positives = 10/15 (66%)
Frame = -2
Query: 335 VVIPHRYPLFYGNLP 291
V +P P++YGN P
Sbjct: 346 VPVPVPVPVYYGNFP 360
>AB267886-1|BAF46356.1| 567|Apis mellifera ecdysteroid receptor A
isoform protein.
Length = 567
Score = 21.4 bits (43), Expect = 9.3
Identities = 9/28 (32%), Positives = 16/28 (57%)
Frame = +3
Query: 291 GQVSVEEWVSMWNDYAXNPSAALKWQQL 374
G ++W++ N +PSAAL+ Q +
Sbjct: 81 GAARSDDWLANANSPVGSPSAALQPQHV 108
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 188,032
Number of Sequences: 438
Number of extensions: 3526
Number of successful extensions: 38
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 38
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 38
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 23510295
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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