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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brP-0585
         (750 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ667181-1|ABG75733.1|  445|Apis mellifera GABA-gated chloride c...    25   1.0  
DQ325094-1|ABD14108.1|  175|Apis mellifera complementary sex det...    24   1.3  
DQ325093-1|ABD14107.1|  175|Apis mellifera complementary sex det...    24   1.3  
DQ325092-1|ABD14106.1|  175|Apis mellifera complementary sex det...    24   1.3  
DQ325091-1|ABD14105.1|  175|Apis mellifera complementary sex det...    24   1.3  
AY569710-1|AAS86663.1|  408|Apis mellifera complementary sex det...    24   1.3  
AY569709-1|AAS86662.1|  408|Apis mellifera complementary sex det...    24   1.3  
AY569708-1|AAS86661.1|  408|Apis mellifera complementary sex det...    24   1.3  
AY569707-1|AAS86660.1|  408|Apis mellifera complementary sex det...    24   1.3  
AY569706-1|AAS86659.1|  397|Apis mellifera complementary sex det...    24   1.3  
DQ667182-1|ABG75734.1|  445|Apis mellifera GABA-gated chloride c...    23   2.3  
AY569694-1|AAS86647.1|  400|Apis mellifera complementary sex det...    23   3.1  
AF213012-1|AAG43568.1|  492|Apis mellifera acetylcholinesterase ...    23   3.1  
AB181702-1|BAE06051.1|  628|Apis mellifera acetylcholinesterase ...    23   3.1  
AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase...    22   7.1  
DQ325109-1|ABD14123.1|  177|Apis mellifera complementary sex det...    21   9.3  
DQ325108-1|ABD14122.1|  177|Apis mellifera complementary sex det...    21   9.3  
DQ325106-1|ABD14120.1|  177|Apis mellifera complementary sex det...    21   9.3  
AY350615-1|AAQ57657.1|  410|Apis mellifera complementary sex det...    21   9.3  
AB267886-1|BAF46356.1|  567|Apis mellifera ecdysteroid receptor ...    21   9.3  

>DQ667181-1|ABG75733.1|  445|Apis mellifera GABA-gated chloride
           channel protein.
          Length = 445

 Score = 24.6 bits (51), Expect = 1.0
 Identities = 10/29 (34%), Positives = 17/29 (58%)
 Frame = -2

Query: 305 YGNLPILVGISSFPQSIPDLDHDLMSFSV 219
           YG  P+ VG++ +  SI  +   LM F++
Sbjct: 31  YGGPPVEVGVTMYVLSISSVSEVLMDFTL 59


>DQ325094-1|ABD14108.1|  175|Apis mellifera complementary sex
           determiner protein.
          Length = 175

 Score = 24.2 bits (50), Expect = 1.3
 Identities = 6/19 (31%), Positives = 13/19 (68%)
 Frame = -2

Query: 347 WVXSVVIPHRYPLFYGNLP 291
           ++  + +P  +P++YGN P
Sbjct: 107 YIEQIPVPVPFPVYYGNFP 125


>DQ325093-1|ABD14107.1|  175|Apis mellifera complementary sex
           determiner protein.
          Length = 175

 Score = 24.2 bits (50), Expect = 1.3
 Identities = 6/19 (31%), Positives = 13/19 (68%)
 Frame = -2

Query: 347 WVXSVVIPHRYPLFYGNLP 291
           ++  + +P  +P++YGN P
Sbjct: 107 YIEQIPVPVPFPVYYGNFP 125


>DQ325092-1|ABD14106.1|  175|Apis mellifera complementary sex
           determiner protein.
          Length = 175

 Score = 24.2 bits (50), Expect = 1.3
 Identities = 6/19 (31%), Positives = 13/19 (68%)
 Frame = -2

Query: 347 WVXSVVIPHRYPLFYGNLP 291
           ++  + +P  +P++YGN P
Sbjct: 107 YIEQIPVPVPFPVYYGNFP 125


>DQ325091-1|ABD14105.1|  175|Apis mellifera complementary sex
           determiner protein.
          Length = 175

 Score = 24.2 bits (50), Expect = 1.3
 Identities = 6/19 (31%), Positives = 13/19 (68%)
 Frame = -2

Query: 347 WVXSVVIPHRYPLFYGNLP 291
           ++  + +P  +P++YGN P
Sbjct: 107 YIEQIPVPVPFPVYYGNFP 125


>AY569710-1|AAS86663.1|  408|Apis mellifera complementary sex
           determiner protein.
          Length = 408

 Score = 24.2 bits (50), Expect = 1.3
 Identities = 6/19 (31%), Positives = 13/19 (68%)
 Frame = -2

Query: 347 WVXSVVIPHRYPLFYGNLP 291
           ++  + +P  +P++YGN P
Sbjct: 340 YIEQIPVPVPFPVYYGNFP 358


>AY569709-1|AAS86662.1|  408|Apis mellifera complementary sex
           determiner protein.
          Length = 408

 Score = 24.2 bits (50), Expect = 1.3
 Identities = 6/19 (31%), Positives = 13/19 (68%)
 Frame = -2

Query: 347 WVXSVVIPHRYPLFYGNLP 291
           ++  + +P  +P++YGN P
Sbjct: 340 YIEQIPVPVPFPVYYGNFP 358


>AY569708-1|AAS86661.1|  408|Apis mellifera complementary sex
           determiner protein.
          Length = 408

 Score = 24.2 bits (50), Expect = 1.3
 Identities = 6/19 (31%), Positives = 13/19 (68%)
 Frame = -2

Query: 347 WVXSVVIPHRYPLFYGNLP 291
           ++  + +P  +P++YGN P
Sbjct: 340 YIEQIPVPVPFPVYYGNFP 358


>AY569707-1|AAS86660.1|  408|Apis mellifera complementary sex
           determiner protein.
          Length = 408

 Score = 24.2 bits (50), Expect = 1.3
 Identities = 6/19 (31%), Positives = 13/19 (68%)
 Frame = -2

Query: 347 WVXSVVIPHRYPLFYGNLP 291
           ++  + +P  +P++YGN P
Sbjct: 340 YIEQIPVPVPFPVYYGNFP 358


>AY569706-1|AAS86659.1|  397|Apis mellifera complementary sex
           determiner protein.
          Length = 397

 Score = 24.2 bits (50), Expect = 1.3
 Identities = 6/19 (31%), Positives = 13/19 (68%)
 Frame = -2

Query: 347 WVXSVVIPHRYPLFYGNLP 291
           ++  + +P  +P++YGN P
Sbjct: 329 YIEQIPVPVPFPVYYGNFP 347


>DQ667182-1|ABG75734.1|  445|Apis mellifera GABA-gated chloride
           channel protein.
          Length = 445

 Score = 23.4 bits (48), Expect = 2.3
 Identities = 10/29 (34%), Positives = 16/29 (55%)
 Frame = -2

Query: 305 YGNLPILVGISSFPQSIPDLDHDLMSFSV 219
           YG  P+ VG++ +  SI  L    M F++
Sbjct: 31  YGGPPVEVGVTMYVLSISSLSEVKMDFTL 59


>AY569694-1|AAS86647.1|  400|Apis mellifera complementary sex
           determiner protein.
          Length = 400

 Score = 23.0 bits (47), Expect = 3.1
 Identities = 6/19 (31%), Positives = 12/19 (63%)
 Frame = -2

Query: 347 WVXSVVIPHRYPLFYGNLP 291
           ++  + +P   P++YGN P
Sbjct: 332 YIEQIPVPVPVPIYYGNFP 350


>AF213012-1|AAG43568.1|  492|Apis mellifera acetylcholinesterase
           protein.
          Length = 492

 Score = 23.0 bits (47), Expect = 3.1
 Identities = 9/22 (40%), Positives = 15/22 (68%)
 Frame = +3

Query: 96  LLYVFNVFFDVNQSGTIERKDF 161
           +LY FN  F+ +Q+  +ER+ F
Sbjct: 387 ILYDFNDIFEKDQASFLERERF 408


>AB181702-1|BAE06051.1|  628|Apis mellifera acetylcholinesterase
           protein.
          Length = 628

 Score = 23.0 bits (47), Expect = 3.1
 Identities = 9/22 (40%), Positives = 15/22 (68%)
 Frame = +3

Query: 96  LLYVFNVFFDVNQSGTIERKDF 161
           +LY FN  F+ +Q+  +ER+ F
Sbjct: 387 ILYDFNDIFEKDQASFLERERF 408


>AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase
           protein.
          Length = 1143

 Score = 21.8 bits (44), Expect = 7.1
 Identities = 9/24 (37%), Positives = 16/24 (66%)
 Frame = -3

Query: 124 SKNTLNTYRSFFLLNSETDIFESR 53
           +K +L T +SF   NS+T++  S+
Sbjct: 554 NKISLATSKSFIKANSQTEVSNSK 577


>DQ325109-1|ABD14123.1|  177|Apis mellifera complementary sex
           determiner protein.
          Length = 177

 Score = 21.4 bits (43), Expect = 9.3
 Identities = 7/15 (46%), Positives = 10/15 (66%)
 Frame = -2

Query: 335 VVIPHRYPLFYGNLP 291
           V +P   P++YGN P
Sbjct: 113 VPVPVPVPVYYGNFP 127


>DQ325108-1|ABD14122.1|  177|Apis mellifera complementary sex
           determiner protein.
          Length = 177

 Score = 21.4 bits (43), Expect = 9.3
 Identities = 7/15 (46%), Positives = 10/15 (66%)
 Frame = -2

Query: 335 VVIPHRYPLFYGNLP 291
           V +P   P++YGN P
Sbjct: 113 VPVPVPVPVYYGNFP 127


>DQ325106-1|ABD14120.1|  177|Apis mellifera complementary sex
           determiner protein.
          Length = 177

 Score = 21.4 bits (43), Expect = 9.3
 Identities = 7/15 (46%), Positives = 10/15 (66%)
 Frame = -2

Query: 335 VVIPHRYPLFYGNLP 291
           V +P   P++YGN P
Sbjct: 113 VPVPVPVPVYYGNFP 127


>AY350615-1|AAQ57657.1|  410|Apis mellifera complementary sex
           determiner protein.
          Length = 410

 Score = 21.4 bits (43), Expect = 9.3
 Identities = 7/15 (46%), Positives = 10/15 (66%)
 Frame = -2

Query: 335 VVIPHRYPLFYGNLP 291
           V +P   P++YGN P
Sbjct: 346 VPVPVPVPVYYGNFP 360


>AB267886-1|BAF46356.1|  567|Apis mellifera ecdysteroid receptor A
           isoform protein.
          Length = 567

 Score = 21.4 bits (43), Expect = 9.3
 Identities = 9/28 (32%), Positives = 16/28 (57%)
 Frame = +3

Query: 291 GQVSVEEWVSMWNDYAXNPSAALKWQQL 374
           G    ++W++  N    +PSAAL+ Q +
Sbjct: 81  GAARSDDWLANANSPVGSPSAALQPQHV 108


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 188,032
Number of Sequences: 438
Number of extensions: 3526
Number of successful extensions: 38
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 38
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 38
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 23510295
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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