Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brP-0584
         (503 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY705396-1|AAU12505.1|  710|Anopheles gambiae nicotinic acetylch...    27   0.36 
AY753541-1|AAV28544.1| 3398|Anopheles gambiae SGS4 protein.            25   1.1  
AJ292755-1|CAC00630.1|  837|Anopheles gambiae integrin beta subu...    23   5.9  
DQ219483-1|ABB29887.1|  961|Anopheles gambiae cryptochrome 2 pro...    23   7.8  

>AY705396-1|AAU12505.1|  710|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 3 protein.
          Length = 710

 Score = 27.1 bits (57), Expect = 0.36
 Identities = 9/26 (34%), Positives = 13/26 (50%)
 Frame = +1

Query: 67  RIGKAPXSIQXGRGNAGGEHHHXNQH 144
           R+  +P  +   R   GG HHH + H
Sbjct: 414 RLHGSPTHLHNHRSGGGGRHHHHHHH 439


>AY753541-1|AAV28544.1| 3398|Anopheles gambiae SGS4 protein.
          Length = 3398

 Score = 25.4 bits (53), Expect = 1.1
 Identities = 10/27 (37%), Positives = 15/27 (55%)
 Frame = -2

Query: 181 KFAKVXQGWYLXHVDXCDGAHHQHYHD 101
           K  K+   WYL H +   GA+  +Y+D
Sbjct: 566 KKRKLPSRWYLVHEESKYGAYANYYYD 592


>AJ292755-1|CAC00630.1|  837|Anopheles gambiae integrin beta subunit
           protein.
          Length = 837

 Score = 23.0 bits (47), Expect = 5.9
 Identities = 8/15 (53%), Positives = 10/15 (66%)
 Frame = +1

Query: 415 EENQGCGWCLCTICV 459
           EE  G G C+C +CV
Sbjct: 558 EECSGRGQCVCGVCV 572


>DQ219483-1|ABB29887.1|  961|Anopheles gambiae cryptochrome 2
           protein.
          Length = 961

 Score = 22.6 bits (46), Expect = 7.8
 Identities = 8/27 (29%), Positives = 15/27 (55%)
 Frame = +1

Query: 310 RHQYCQSWILQVARQRQTPQTTCHSKS 390
           RH   ++W+    R + TPQ+   S++
Sbjct: 224 RHLERKAWVASFGRPKMTPQSLLASQT 250


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 427,468
Number of Sequences: 2352
Number of extensions: 7775
Number of successful extensions: 23
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 20
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 23
length of database: 563,979
effective HSP length: 60
effective length of database: 422,859
effective search space used: 45245913
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)